EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006701 (Gene tree)
Gene ID: -
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: sharpin and rbck1 related
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 9202 bases
Position: chrKQ557214.1:9002113-9011314
Accession: ZDB-GENE-080220-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008778	zf-RanBP	PF00641.18	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000008884	-	2064	-	ENSXCOP00000008778	687 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006701	shrprbck1r	58	42.647	ENSXCOG00000015019	sharpin	96	42.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006701	shrprbck1r	100	79.296	ENSAPOG00000022737	shrprbck1r	100	79.296	Acanthochromis_polyacanthus
ENSXCOG00000006701	shrprbck1r	58	55.116	ENSAPOG00000023352	sharpin	95	55.116	Acanthochromis_polyacanthus
ENSXCOG00000006701	shrprbck1r	100	76.545	ENSACIG00000002184	shrprbck1r	100	76.545	Amphilophus_citrinellus
ENSXCOG00000006701	shrprbck1r	58	54.608	ENSAOCG00000017464	sharpin	95	54.608	Amphiprion_ocellaris
ENSXCOG00000006701	shrprbck1r	100	79.383	ENSAOCG00000002890	shrprbck1r	100	79.383	Amphiprion_ocellaris
ENSXCOG00000006701	shrprbck1r	100	80.884	ENSAPEG00000023274	shrprbck1r	100	80.884	Amphiprion_percula
ENSXCOG00000006701	shrprbck1r	58	54.608	ENSAPEG00000004049	sharpin	95	54.608	Amphiprion_percula
ENSXCOG00000006701	shrprbck1r	100	78.684	ENSATEG00000014561	shrprbck1r	100	78.970	Anabas_testudineus
ENSXCOG00000006701	shrprbck1r	59	56.019	ENSATEG00000007832	sharpin	88	56.019	Anabas_testudineus
ENSXCOG00000006701	shrprbck1r	100	76.934	ENSACLG00000022609	shrprbck1r	100	77.650	Astatotilapia_calliptera
ENSXCOG00000006701	shrprbck1r	53	56.533	ENSAMXG00000006229	sharpin	97	56.533	Astyanax_mexicanus
ENSXCOG00000006701	shrprbck1r	100	67.030	ENSAMXG00000021016	shrprbck1r	100	67.260	Astyanax_mexicanus
ENSXCOG00000006701	shrprbck1r	100	71.875	ENSCSEG00000011306	shrprbck1r	100	72.159	Cynoglossus_semilaevis
ENSXCOG00000006701	shrprbck1r	100	86.479	ENSCVAG00000007250	shrprbck1r	100	86.479	Cyprinodon_variegatus
ENSXCOG00000006701	shrprbck1r	58	50.913	ENSCVAG00000006586	sharpin	95	50.913	Cyprinodon_variegatus
ENSXCOG00000006701	shrprbck1r	100	66.898	ENSDARG00000059871	shrprbck1r	100	67.036	Danio_rerio
ENSXCOG00000006701	shrprbck1r	53	51.813	ENSDARG00000076995	sharpin	94	51.813	Danio_rerio
ENSXCOG00000006701	shrprbck1r	100	69.371	ENSELUG00000016022	shrprbck1r	100	69.371	Esox_lucius
ENSXCOG00000006701	shrprbck1r	58	51.748	ENSFHEG00000013564	sharpin	94	51.748	Fundulus_heteroclitus
ENSXCOG00000006701	shrprbck1r	100	90.935	ENSGAFG00000009309	shrprbck1r	100	90.935	Gambusia_affinis
ENSXCOG00000006701	shrprbck1r	58	44.282	ENSGAFG00000021405	sharpin	95	44.282	Gambusia_affinis
ENSXCOG00000006701	shrprbck1r	77	78.748	ENSGACG00000002544	shrprbck1r	99	78.748	Gasterosteus_aculeatus
ENSXCOG00000006701	shrprbck1r	100	76.404	ENSHBUG00000021933	shrprbck1r	100	76.545	Haplochromis_burtoni
ENSXCOG00000006701	shrprbck1r	59	52.844	ENSHCOG00000018847	sharpin	81	53.081	Hippocampus_comes
ENSXCOG00000006701	shrprbck1r	96	65.507	ENSIPUG00000014247	shrprbck1r	100	63.674	Ictalurus_punctatus
ENSXCOG00000006701	shrprbck1r	53	55.497	ENSIPUG00000011951	sharpin	99	55.497	Ictalurus_punctatus
ENSXCOG00000006701	shrprbck1r	58	56.220	ENSKMAG00000015204	sharpin	76	56.220	Kryptolebias_marmoratus
ENSXCOG00000006701	shrprbck1r	100	76.806	ENSKMAG00000015215	shrprbck1r	100	76.806	Kryptolebias_marmoratus
ENSXCOG00000006701	shrprbck1r	100	77.215	ENSLBEG00000016876	shrprbck1r	100	77.778	Labrus_bergylta
ENSXCOG00000006701	shrprbck1r	59	53.456	ENSLBEG00000016624	sharpin	96	54.091	Labrus_bergylta
ENSXCOG00000006701	shrprbck1r	95	51.375	ENSLACG00000010948	-	97	51.674	Latimeria_chalumnae
ENSXCOG00000006701	shrprbck1r	100	65.694	ENSLOCG00000008910	shrprbck1r	100	65.694	Lepisosteus_oculatus
ENSXCOG00000006701	shrprbck1r	53	56.522	ENSMAMG00000014645	sharpin	95	56.522	Mastacembelus_armatus
ENSXCOG00000006701	shrprbck1r	100	76.096	ENSMAMG00000022930	shrprbck1r	100	76.238	Mastacembelus_armatus
ENSXCOG00000006701	shrprbck1r	100	75.562	ENSMZEG00005021257	shrprbck1r	100	76.264	Maylandia_zebra
ENSXCOG00000006701	shrprbck1r	100	76.136	ENSMMOG00000003764	shrprbck1r	100	76.136	Mola_mola
ENSXCOG00000006701	shrprbck1r	53	56.522	ENSMALG00000020528	sharpin	96	56.522	Monopterus_albus
ENSXCOG00000006701	shrprbck1r	95	77.500	ENSMALG00000008861	shrprbck1r	96	77.147	Monopterus_albus
ENSXCOG00000006701	shrprbck1r	100	76.231	ENSNBRG00000002270	shrprbck1r	100	76.934	Neolamprologus_brichardi
ENSXCOG00000006701	shrprbck1r	100	75.983	ENSONIG00000014401	shrprbck1r	100	76.685	Oreochromis_niloticus
ENSXCOG00000006701	shrprbck1r	53	52.985	ENSONIG00000009626	-	97	52.985	Oreochromis_niloticus
ENSXCOG00000006701	shrprbck1r	58	51.651	ENSORLG00000017281	sharpin	95	51.651	Oryzias_latipes
ENSXCOG00000006701	shrprbck1r	100	75.387	ENSORLG00000007392	shrprbck1r	100	75.387	Oryzias_latipes
ENSXCOG00000006701	shrprbck1r	61	51.794	ENSORLG00020000801	sharpin	98	51.794	Oryzias_latipes_hni
ENSXCOG00000006701	shrprbck1r	100	74.965	ENSORLG00020018619	shrprbck1r	100	74.965	Oryzias_latipes_hni
ENSXCOG00000006701	shrprbck1r	100	74.543	ENSORLG00015018865	shrprbck1r	100	74.543	Oryzias_latipes_hsok
ENSXCOG00000006701	shrprbck1r	58	52.900	ENSORLG00015009860	sharpin	95	52.900	Oryzias_latipes_hsok
ENSXCOG00000006701	shrprbck1r	100	76.197	ENSOMEG00000012749	shrprbck1r	100	76.197	Oryzias_melastigma
ENSXCOG00000006701	shrprbck1r	58	43.902	ENSOMEG00000005729	sharpin	89	43.902	Oryzias_melastigma
ENSXCOG00000006701	shrprbck1r	64	57.143	ENSPKIG00000018308	-	95	57.143	Paramormyrops_kingsleyae
ENSXCOG00000006701	shrprbck1r	100	67.364	ENSPKIG00000006933	shrprbck1r	100	67.643	Paramormyrops_kingsleyae
ENSXCOG00000006701	shrprbck1r	100	73.000	ENSPMGG00000013254	shrprbck1r	100	73.000	Periophthalmus_magnuspinnatus
ENSXCOG00000006701	shrprbck1r	100	92.351	ENSPFOG00000004214	shrprbck1r	100	92.351	Poecilia_formosa
ENSXCOG00000006701	shrprbck1r	58	50.455	ENSPFOG00000015253	sharpin	95	50.455	Poecilia_formosa
ENSXCOG00000006701	shrprbck1r	58	50.682	ENSPLAG00000000423	sharpin	95	50.682	Poecilia_latipinna
ENSXCOG00000006701	shrprbck1r	100	92.210	ENSPLAG00000020523	shrprbck1r	100	92.210	Poecilia_latipinna
ENSXCOG00000006701	shrprbck1r	100	93.314	ENSPMEG00000006877	shrprbck1r	100	93.314	Poecilia_mexicana
ENSXCOG00000006701	shrprbck1r	58	50.801	ENSPREG00000009702	sharpin	95	50.801	Poecilia_reticulata
ENSXCOG00000006701	shrprbck1r	100	92.418	ENSPREG00000014689	shrprbck1r	100	92.418	Poecilia_reticulata
ENSXCOG00000006701	shrprbck1r	100	75.983	ENSPNYG00000022601	shrprbck1r	100	76.685	Pundamilia_nyererei
ENSXCOG00000006701	shrprbck1r	100	65.663	ENSPNAG00000007847	shrprbck1r	100	65.984	Pygocentrus_nattereri
ENSXCOG00000006701	shrprbck1r	53	55.405	ENSPNAG00000002911	sharpin	99	55.526	Pygocentrus_nattereri
ENSXCOG00000006701	shrprbck1r	59	62.411	ENSSFOG00015004028	sharpin	99	45.436	Scleropages_formosus
ENSXCOG00000006701	shrprbck1r	77	62.949	ENSSFOG00015014150	-	96	62.949	Scleropages_formosus
ENSXCOG00000006701	shrprbck1r	100	75.104	ENSSMAG00000018085	shrprbck1r	100	75.382	Scophthalmus_maximus
ENSXCOG00000006701	shrprbck1r	100	78.451	ENSSDUG00000002959	shrprbck1r	100	78.732	Seriola_dumerili
ENSXCOG00000006701	shrprbck1r	59	44.780	ENSSDUG00000019039	sharpin	96	44.780	Seriola_dumerili
ENSXCOG00000006701	shrprbck1r	100	78.169	ENSSLDG00000009026	shrprbck1r	100	78.451	Seriola_lalandi_dorsalis
ENSXCOG00000006701	shrprbck1r	96	78.529	ENSSPAG00000016097	shrprbck1r	99	78.529	Stegastes_partitus
ENSXCOG00000006701	shrprbck1r	62	49.213	ENSTRUG00000011046	sharpin	96	52.257	Takifugu_rubripes
ENSXCOG00000006701	shrprbck1r	100	74.535	ENSTRUG00000006949	shrprbck1r	100	75.250	Takifugu_rubripes
ENSXCOG00000006701	shrprbck1r	53	52.778	ENSTNIG00000008521	sharpin	94	52.778	Tetraodon_nigroviridis
ENSXCOG00000006701	shrprbck1r	100	99.418	ENSXMAG00000018972	shrprbck1r	100	99.418	Xiphophorus_maculatus
ENSXCOG00000006701	shrprbck1r	58	50.682	ENSXMAG00000022076	sharpin	95	50.682	Xiphophorus_maculatus