EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000006825 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2859 bases
Position: chrKQ557203.1:4040253-4043111
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000008955	RRM_1	PF00076.22	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000009061	-	1449	-	ENSXCOP00000008955	482 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006825	-	63	62.115	ENSAPOG00000021712	rbm14b	68	62.115	Acanthochromis_polyacanthus
ENSXCOG00000006825	-	99	83.903	ENSAPOG00000003380	-	99	83.903	Acanthochromis_polyacanthus
ENSXCOG00000006825	-	63	62.115	ENSACIG00000000381	rbm14b	65	62.115	Amphilophus_citrinellus
ENSXCOG00000006825	-	99	83.871	ENSACIG00000021173	-	99	83.065	Amphilophus_citrinellus
ENSXCOG00000006825	-	63	62.115	ENSAOCG00000008941	rbm14b	82	53.846	Amphiprion_ocellaris
ENSXCOG00000006825	-	99	84.663	ENSAOCG00000001659	-	99	84.663	Amphiprion_ocellaris
ENSXCOG00000006825	-	99	84.663	ENSAPEG00000016988	-	99	84.663	Amphiprion_percula
ENSXCOG00000006825	-	66	62.115	ENSAPEG00000003161	rbm14b	82	52.632	Amphiprion_percula
ENSXCOG00000006825	-	63	62.222	ENSATEG00000003034	rbm14b	78	55.747	Anabas_testudineus
ENSXCOG00000006825	-	94	80.892	ENSATEG00000009700	-	96	80.426	Anabas_testudineus
ENSXCOG00000006825	-	99	84.337	ENSACLG00000009112	-	99	84.708	Astatotilapia_calliptera
ENSXCOG00000006825	-	63	62.115	ENSACLG00000014355	rbm14b	64	62.115	Astatotilapia_calliptera
ENSXCOG00000006825	-	66	59.064	ENSAMXG00000007233	rbm14a	82	59.064	Astyanax_mexicanus
ENSXCOG00000006825	-	61	61.712	ENSAMXG00000031225	rbm14b	67	61.712	Astyanax_mexicanus
ENSXCOG00000006825	-	99	79.798	ENSCSEG00000019690	-	99	79.596	Cynoglossus_semilaevis
ENSXCOG00000006825	-	66	50.639	ENSCSEG00000000357	rbm14b	81	50.639	Cynoglossus_semilaevis
ENSXCOG00000006825	-	99	92.083	ENSCVAG00000014858	-	99	91.250	Cyprinodon_variegatus
ENSXCOG00000006825	-	66	62.115	ENSCVAG00000013776	rbm14b	66	62.115	Cyprinodon_variegatus
ENSXCOG00000006825	-	65	58.559	ENSDARG00000012723	rbm14a	80	58.434	Danio_rerio
ENSXCOG00000006825	-	61	61.435	ENSDARG00000103834	rbm14b	63	62.332	Danio_rerio
ENSXCOG00000006825	-	66	63.636	ENSELUG00000004690	rbm14b	78	63.636	Esox_lucius
ENSXCOG00000006825	-	66	56.098	ENSELUG00000023633	rbm14a	81	56.098	Esox_lucius
ENSXCOG00000006825	-	94	88.110	ENSFHEG00000020913	-	99	88.960	Fundulus_heteroclitus
ENSXCOG00000006825	-	65	75.466	ENSGMOG00000010840	-	78	75.466	Gadus_morhua
ENSXCOG00000006825	-	63	62.222	ENSGAFG00000001924	rbm14b	65	62.222	Gambusia_affinis
ENSXCOG00000006825	-	99	98.117	ENSGAFG00000004455	-	99	98.117	Gambusia_affinis
ENSXCOG00000006825	-	92	82.090	ENSGACG00000020440	-	99	81.343	Gasterosteus_aculeatus
ENSXCOG00000006825	-	63	62.115	ENSHBUG00000016754	rbm14b	64	62.115	Haplochromis_burtoni
ENSXCOG00000006825	-	99	84.337	ENSHBUG00000003665	-	99	84.708	Haplochromis_burtoni
ENSXCOG00000006825	-	68	52.841	ENSHCOG00000012571	rbm14b	97	66.667	Hippocampus_comes
ENSXCOG00000006825	-	94	71.190	ENSHCOG00000004071	-	76	77.259	Hippocampus_comes
ENSXCOG00000006825	-	58	61.261	ENSIPUG00000009089	rbm14b	67	62.613	Ictalurus_punctatus
ENSXCOG00000006825	-	66	53.911	ENSIPUG00000021256	rbm14a	83	54.622	Ictalurus_punctatus
ENSXCOG00000006825	-	94	82.869	ENSKMAG00000008514	-	99	82.189	Kryptolebias_marmoratus
ENSXCOG00000006825	-	99	81.837	ENSLBEG00000001217	-	99	81.224	Labrus_bergylta
ENSXCOG00000006825	-	99	79.719	ENSMAMG00000021313	-	99	79.719	Mastacembelus_armatus
ENSXCOG00000006825	-	62	62.896	ENSMAMG00000014394	rbm14b	61	62.896	Mastacembelus_armatus
ENSXCOG00000006825	-	99	84.337	ENSMZEG00005001201	-	99	84.708	Maylandia_zebra
ENSXCOG00000006825	-	63	62.115	ENSMZEG00005020834	rbm14b	65	62.115	Maylandia_zebra
ENSXCOG00000006825	-	63	55.947	ENSMMOG00000012912	rbm14b	69	55.947	Mola_mola
ENSXCOG00000006825	-	99	80.412	ENSMMOG00000014501	-	99	80.412	Mola_mola
ENSXCOG00000006825	-	61	54.294	ENSMALG00000015445	rbm14b	83	54.217	Monopterus_albus
ENSXCOG00000006825	-	63	62.115	ENSNBRG00000003378	rbm14b	65	62.115	Neolamprologus_brichardi
ENSXCOG00000006825	-	99	84.848	ENSNBRG00000004960	-	99	85.020	Neolamprologus_brichardi
ENSXCOG00000006825	-	61	58.333	ENSONIG00000013035	rbm14b	82	56.322	Oreochromis_niloticus
ENSXCOG00000006825	-	66	42.643	ENSORLG00000008051	rbm14b	82	44.755	Oryzias_latipes
ENSXCOG00000006825	-	99	83.130	ENSORLG00000001900	-	99	82.688	Oryzias_latipes
ENSXCOG00000006825	-	99	83.130	ENSORLG00020019144	-	99	82.688	Oryzias_latipes_hni
ENSXCOG00000006825	-	66	42.250	ENSORLG00020005551	rbm14b	82	42.500	Oryzias_latipes_hni
ENSXCOG00000006825	-	99	83.130	ENSORLG00015000082	-	99	82.724	Oryzias_latipes_hsok
ENSXCOG00000006825	-	66	42.643	ENSORLG00015022683	rbm14b	82	44.755	Oryzias_latipes_hsok
ENSXCOG00000006825	-	66	62.667	ENSOMEG00000000910	rbm14b	78	54.545	Oryzias_melastigma
ENSXCOG00000006825	-	77	85.348	ENSOMEG00000006508	-	94	92.784	Oryzias_melastigma
ENSXCOG00000006825	-	65	47.264	ENSPKIG00000009078	rbm14b	85	46.552	Paramormyrops_kingsleyae
ENSXCOG00000006825	-	73	78.273	ENSPMGG00000018869	-	93	85.714	Periophthalmus_magnuspinnatus
ENSXCOG00000006825	-	63	62.115	ENSPMGG00000013064	rbm14b	65	61.842	Periophthalmus_magnuspinnatus
ENSXCOG00000006825	-	94	94.872	ENSPFOG00000004843	-	99	94.872	Poecilia_formosa
ENSXCOG00000006825	-	94	94.872	ENSPLAG00000017359	-	99	94.872	Poecilia_latipinna
ENSXCOG00000006825	-	63	62.667	ENSPLAG00000001395	rbm14b	65	62.667	Poecilia_latipinna
ENSXCOG00000006825	-	63	62.667	ENSPMEG00000012911	rbm14b	65	62.667	Poecilia_mexicana
ENSXCOG00000006825	-	99	95.152	ENSPMEG00000004894	-	99	95.152	Poecilia_mexicana
ENSXCOG00000006825	-	94	94.658	ENSPREG00000007274	-	99	94.658	Poecilia_reticulata
ENSXCOG00000006825	-	63	62.115	ENSPNYG00000023605	rbm14b	65	62.115	Pundamilia_nyererei
ENSXCOG00000006825	-	99	84.337	ENSPNYG00000015906	-	99	84.708	Pundamilia_nyererei
ENSXCOG00000006825	-	61	62.162	ENSPNAG00000001977	rbm14b	83	45.803	Pygocentrus_nattereri
ENSXCOG00000006825	-	66	55.866	ENSPNAG00000012473	rbm14a	84	56.145	Pygocentrus_nattereri
ENSXCOG00000006825	-	63	63.436	ENSSMAG00000004522	rbm14b	68	63.436	Scophthalmus_maximus
ENSXCOG00000006825	-	99	82.020	ENSSMAG00000002055	-	99	81.818	Scophthalmus_maximus
ENSXCOG00000006825	-	99	82.000	ENSSDUG00000020756	-	99	83.000	Seriola_dumerili
ENSXCOG00000006825	-	63	62.115	ENSSDUG00000007975	rbm14b	65	62.115	Seriola_dumerili
ENSXCOG00000006825	-	63	62.115	ENSSLDG00000006472	rbm14b	65	62.115	Seriola_lalandi_dorsalis
ENSXCOG00000006825	-	99	81.511	ENSSLDG00000006311	-	99	82.306	Seriola_lalandi_dorsalis
ENSXCOG00000006825	-	63	62.115	ENSSPAG00000004231	rbm14b	64	62.115	Stegastes_partitus
ENSXCOG00000006825	-	99	84.677	ENSSPAG00000010825	-	99	84.677	Stegastes_partitus
ENSXCOG00000006825	-	94	75.000	ENSTRUG00000009504	-	93	74.138	Takifugu_rubripes
ENSXCOG00000006825	-	61	52.599	ENSTNIG00000006844	rbm14b	79	52.000	Tetraodon_nigroviridis
ENSXCOG00000006825	-	80	74.185	ENSTNIG00000000058	-	92	81.424	Tetraodon_nigroviridis
ENSXCOG00000006825	-	63	62.222	ENSXMAG00000008390	rbm14b	65	62.222	Xiphophorus_maculatus
ENSXCOG00000006825	-	99	99.582	ENSXMAG00000000338	-	99	99.582	Xiphophorus_maculatus