EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000006974 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 13032 bases
Position: chrKQ557215.1:8500229-8513260
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000009175	dsrm	PF00035.26	1.9e-38	1	3
ENSXCOP00000009175	dsrm	PF00035.26	1.9e-38	2	3
ENSXCOP00000009175	dsrm	PF00035.26	1.9e-38	3	3
ENSXCOP00000009173	dsrm	PF00035.26	5.4e-37	1	2
ENSXCOP00000009173	dsrm	PF00035.26	5.4e-37	2	2
ENSXCOP00000009155	dsrm	PF00035.26	4.7e-35	1	2
ENSXCOP00000009155	dsrm	PF00035.26	4.7e-35	2	2
ENSXCOP00000009166	dsrm	PF00035.26	9.6e-24	1	2
ENSXCOP00000009166	dsrm	PF00035.26	9.6e-24	2	2
ENSXCOP00000009180	dsrm	PF00035.26	2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000009284	-	1953	-	ENSXCOP00000009173	650 (aa)	-	-
ENSXCOT00000009286	-	1917	-	ENSXCOP00000009175	638 (aa)	-	-
ENSXCOT00000009278	-	1386	-	ENSXCOP00000009166	461 (aa)	-	-
ENSXCOT00000009266	-	1869	-	ENSXCOP00000009155	622 (aa)	-	-
ENSXCOT00000009291	-	1518	-	ENSXCOP00000009180	505 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000006974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000006974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000006974	-	95	43.177	ENSXCOG00000006961	-	98	44.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000006974	-	94	44.737	ENSG00000055332	EIF2AK2	95	44.737	Homo_sapiens
ENSXCOG00000006974	-	96	60.241	ENSAPOG00000010686	-	97	60.241	Acanthochromis_polyacanthus
ENSXCOG00000006974	-	93	41.275	ENSAMEG00000017552	EIF2AK2	96	36.943	Ailuropoda_melanoleuca
ENSXCOG00000006974	-	97	57.903	ENSAOCG00000003388	-	97	57.903	Amphiprion_ocellaris
ENSXCOG00000006974	-	97	50.313	ENSAOCG00000003368	-	97	50.156	Amphiprion_ocellaris
ENSXCOG00000006974	-	95	50.888	ENSAPEG00000023919	-	97	50.888	Amphiprion_percula
ENSXCOG00000006974	-	99	60.843	ENSAPEG00000023903	-	99	60.843	Amphiprion_percula
ENSXCOG00000006974	-	93	40.000	ENSACAG00000008379	EIF2AK2	96	40.000	Anolis_carolinensis
ENSXCOG00000006974	-	96	35.010	ENSANAG00000035319	EIF2AK2	97	35.010	Aotus_nancymaae
ENSXCOG00000006974	-	98	59.236	ENSACLG00000023938	-	99	59.236	Astatotilapia_calliptera
ENSXCOG00000006974	-	99	55.621	ENSACLG00000023699	-	100	55.621	Astatotilapia_calliptera
ENSXCOG00000006974	-	95	35.714	ENSBTAG00000008703	EIF2AK2	95	35.714	Bos_taurus
ENSXCOG00000006974	-	97	40.625	ENSCJAG00000003819	EIF2AK2	96	44.156	Callithrix_jacchus
ENSXCOG00000006974	-	97	39.394	ENSCAFG00000006051	EIF2AK2	97	39.394	Canis_familiaris
ENSXCOG00000006974	-	97	39.394	ENSCAFG00020022842	EIF2AK2	97	39.394	Canis_lupus_dingo
ENSXCOG00000006974	-	96	33.974	ENSCHIG00000016319	EIF2AK2	95	34.347	Capra_hircus
ENSXCOG00000006974	-	92	38.811	ENSTSYG00000013328	EIF2AK2	95	33.816	Carlito_syrichta
ENSXCOG00000006974	-	96	31.740	ENSCAPG00000016388	-	97	31.740	Cavia_aperea
ENSXCOG00000006974	-	97	42.105	ENSCPOG00000012198	EIF2AK2	97	42.105	Cavia_porcellus
ENSXCOG00000006974	-	95	38.217	ENSCCAG00000037822	EIF2AK2	95	37.888	Cebus_capucinus
ENSXCOG00000006974	-	97	42.353	ENSCATG00000036727	EIF2AK2	97	44.000	Cercocebus_atys
ENSXCOG00000006974	-	96	32.479	ENSCLAG00000008409	-	97	31.522	Chinchilla_lanigera
ENSXCOG00000006974	-	95	42.667	ENSCSAG00000012135	EIF2AK2	95	42.667	Chlorocebus_sabaeus
ENSXCOG00000006974	-	76	47.500	ENSCHOG00000004388	-	65	53.846	Choloepus_hoffmanni
ENSXCOG00000006974	-	97	41.558	ENSCGRG00001021739	eIF2aK2	97	41.558	Cricetulus_griseus_chok1gshd
ENSXCOG00000006974	-	81	41.558	ENSCGRG00000015847	Eif2ak2	94	41.558	Cricetulus_griseus_crigri
ENSXCOG00000006974	-	96	32.976	ENSDNOG00000010498	EIF2AK2	97	32.258	Dasypus_novemcinctus
ENSXCOG00000006974	-	97	33.133	ENSDORG00000009488	Eif2ak2	96	33.202	Dipodomys_ordii
ENSXCOG00000006974	-	61	40.323	ENSETEG00000009782	-	81	39.837	Echinops_telfairi
ENSXCOG00000006974	-	96	35.948	ENSEASG00005007360	EIF2AK2	96	36.000	Equus_asinus_asinus
ENSXCOG00000006974	-	96	36.601	ENSECAG00000011726	EIF2AK2	96	36.000	Equus_caballus
ENSXCOG00000006974	-	97	43.038	ENSFCAG00000006339	EIF2AK2	97	43.038	Felis_catus
ENSXCOG00000006974	-	88	34.689	ENSFALG00000011889	EIF2AK2	94	33.792	Ficedula_albicollis
ENSXCOG00000006974	-	94	30.921	ENSFDAG00000006052	-	93	32.731	Fukomys_damarensis
ENSXCOG00000006974	-	94	32.684	ENSGALG00000010560	EIF2AK2	96	33.654	Gallus_gallus
ENSXCOG00000006974	-	100	90.286	ENSGAFG00000005269	-	99	93.421	Gambusia_affinis
ENSXCOG00000006974	-	99	33.124	ENSGAGG00000002104	EIF2AK2	95	34.058	Gopherus_agassizii
ENSXCOG00000006974	-	96	40.860	ENSGGOG00000005556	EIF2AK2	95	43.421	Gorilla_gorilla
ENSXCOG00000006974	-	92	37.586	ENSHGLG00000013093	EIF2AK2	96	31.194	Heterocephalus_glaber_female
ENSXCOG00000006974	-	92	37.586	ENSHGLG00100005051	EIF2AK2	96	31.194	Heterocephalus_glaber_male
ENSXCOG00000006974	-	96	41.026	ENSSTOG00000013886	EIF2AK2	95	41.772	Ictidomys_tridecemlineatus
ENSXCOG00000006974	-	99	60.000	ENSKMAG00000008407	-	99	60.000	Kryptolebias_marmoratus
ENSXCOG00000006974	-	93	49.832	ENSLOCG00000015909	-	96	43.275	Lepisosteus_oculatus
ENSXCOG00000006974	-	98	32.969	ENSLAFG00000018604	EIF2AK2	98	33.458	Loxodonta_africana
ENSXCOG00000006974	-	95	44.000	ENSMFAG00000030576	EIF2AK2	96	44.000	Macaca_fascicularis
ENSXCOG00000006974	-	95	44.000	ENSMMUG00000037522	EIF2AK2	96	44.000	Macaca_mulatta
ENSXCOG00000006974	-	95	44.000	ENSMNEG00000040090	EIF2AK2	90	44.000	Macaca_nemestrina
ENSXCOG00000006974	-	95	44.000	ENSMLEG00000033494	EIF2AK2	97	44.000	Mandrillus_leucophaeus
ENSXCOG00000006974	-	98	56.725	ENSMZEG00005009747	-	92	64.667	Maylandia_zebra
ENSXCOG00000006974	-	94	31.250	ENSMGAG00000011175	EIF2AK2	95	32.857	Meleagris_gallopavo
ENSXCOG00000006974	-	98	37.333	ENSMAUG00000000309	Eif2ak2	98	37.333	Mesocricetus_auratus
ENSXCOG00000006974	-	93	40.667	ENSMICG00000003317	EIF2AK2	89	35.728	Microcebus_murinus
ENSXCOG00000006974	-	50	31.224	ENSMOCG00000021613	-	81	35.165	Microtus_ochrogaster
ENSXCOG00000006974	-	97	42.500	ENSMMOG00000000659	-	97	41.667	Mola_mola
ENSXCOG00000006974	-	96	33.913	ENSMODG00000015286	-	94	34.297	Monodelphis_domestica
ENSXCOG00000006974	-	96	30.885	MGP_CAROLIEiJ_G0021889	Eif2ak2	94	31.144	Mus_caroli
ENSXCOG00000006974	-	96	33.766	ENSMUSG00000024079	Eif2ak2	97	33.989	Mus_musculus
ENSXCOG00000006974	-	96	33.117	MGP_PahariEiJ_G0020877	Eif2ak2	97	33.694	Mus_pahari
ENSXCOG00000006974	-	96	33.766	MGP_SPRETEiJ_G0022803	Eif2ak2	97	34.347	Mus_spretus
ENSXCOG00000006974	-	96	43.077	ENSMPUG00000009893	EIF2AK2	98	43.077	Mustela_putorius_furo
ENSXCOG00000006974	-	76	36.709	ENSMLUG00000030615	-	97	36.364	Myotis_lucifugus
ENSXCOG00000006974	-	98	36.364	ENSMLUG00000003513	-	97	36.364	Myotis_lucifugus
ENSXCOG00000006974	-	98	33.455	ENSNGAG00000017501	Eif2ak2	98	32.252	Nannospalax_galili
ENSXCOG00000006974	-	99	58.480	ENSNBRG00000019369	-	99	58.480	Neolamprologus_brichardi
ENSXCOG00000006974	-	95	43.421	ENSNLEG00000016201	EIF2AK2	96	43.421	Nomascus_leucogenys
ENSXCOG00000006974	-	66	34.177	ENSOPRG00000008168	-	59	34.395	Ochotona_princeps
ENSXCOG00000006974	-	96	35.604	ENSOANG00000003939	-	96	35.393	Ornithorhynchus_anatinus
ENSXCOG00000006974	-	96	34.831	ENSOCUG00000007223	EIF2AK2	98	37.879	Oryctolagus_cuniculus
ENSXCOG00000006974	-	96	32.799	ENSOGAG00000002562	EIF2AK2	96	32.933	Otolemur_garnettii
ENSXCOG00000006974	-	95	35.032	ENSOARG00000009740	EIF2AK2	95	35.032	Ovis_aries
ENSXCOG00000006974	-	96	40.860	ENSPPAG00000034727	EIF2AK2	96	40.860	Pan_paniscus
ENSXCOG00000006974	-	97	43.038	ENSPPRG00000003287	EIF2AK2	97	43.038	Panthera_pardus
ENSXCOG00000006974	-	97	43.038	ENSPTIG00000018329	EIF2AK2	97	43.038	Panthera_tigris_altaica
ENSXCOG00000006974	-	95	40.860	ENSPTRG00000011834	EIF2AK2	96	40.860	Pan_troglodytes
ENSXCOG00000006974	-	95	44.000	ENSPANG00000004770	EIF2AK2	96	44.000	Papio_anubis
ENSXCOG00000006974	-	95	40.000	ENSPSIG00000018049	EIF2AK2	96	35.152	Pelodiscus_sinensis
ENSXCOG00000006974	-	83	35.211	ENSPEMG00000010269	Eif2ak2	98	36.341	Peromyscus_maniculatus_bairdii
ENSXCOG00000006974	-	95	42.553	ENSPCIG00000010984	-	95	43.421	Phascolarctos_cinereus
ENSXCOG00000006974	-	86	45.963	ENSPLAG00000023907	-	97	45.963	Poecilia_latipinna
ENSXCOG00000006974	-	99	96.226	ENSPREG00000007871	-	92	96.226	Poecilia_reticulata
ENSXCOG00000006974	-	95	40.000	ENSPPYG00000012493	EIF2AK2	95	41.892	Pongo_abelii
ENSXCOG00000006974	-	85	39.496	ENSPCAG00000013068	EIF2AK2	79	39.224	Procavia_capensis
ENSXCOG00000006974	-	96	33.394	ENSPCOG00000014117	EIF2AK2	98	32.988	Propithecus_coquereli
ENSXCOG00000006974	-	97	32.423	ENSPVAG00000013831	EIF2AK2	97	31.930	Pteropus_vampyrus
ENSXCOG00000006974	-	96	34.522	ENSRNOG00000048315	Eif2ak2	97	38.824	Rattus_norvegicus
ENSXCOG00000006974	-	97	41.304	ENSRBIG00000034494	EIF2AK2	98	42.667	Rhinopithecus_bieti
ENSXCOG00000006974	-	97	41.304	ENSRROG00000040152	EIF2AK2	96	42.667	Rhinopithecus_roxellana
ENSXCOG00000006974	-	95	35.758	ENSSBOG00000026743	EIF2AK2	96	41.463	Saimiri_boliviensis_boliviensis
ENSXCOG00000006974	-	93	41.637	ENSSHAG00000001447	-	94	36.765	Sarcophilus_harrisii
ENSXCOG00000006974	-	94	49.682	ENSSFOG00015008993	-	95	49.682	Scleropages_formosus
ENSXCOG00000006974	-	98	58.442	ENSSMAG00000010248	-	99	55.090	Scophthalmus_maximus
ENSXCOG00000006974	-	95	55.814	ENSSDUG00000002941	-	98	49.733	Seriola_dumerili
ENSXCOG00000006974	-	96	60.241	ENSSPAG00000007546	-	98	55.801	Stegastes_partitus
ENSXCOG00000006974	-	88	59.412	ENSSPAG00000007673	-	89	59.412	Stegastes_partitus
ENSXCOG00000006974	-	92	38.754	ENSSSCG00000008496	-	98	32.409	Sus_scrofa
ENSXCOG00000006974	-	92	35.514	ENSTGUG00000008788	EIF2AK2	95	37.333	Taeniopygia_guttata
ENSXCOG00000006974	-	97	53.012	ENSTRUG00000002791	-	98	53.012	Takifugu_rubripes
ENSXCOG00000006974	-	88	41.131	ENSTNIG00000000327	-	100	40.551	Tetraodon_nigroviridis
ENSXCOG00000006974	-	64	41.259	ENSTBEG00000014601	-	62	35.644	Tupaia_belangeri
ENSXCOG00000006974	-	98	32.062	ENSTTRG00000006882	EIF2AK2	97	32.597	Tursiops_truncatus
ENSXCOG00000006974	-	94	38.462	ENSUAMG00000015141	-	98	34.018	Ursus_americanus
ENSXCOG00000006974	-	96	35.669	ENSUMAG00000014765	EIF2AK2	95	45.455	Ursus_maritimus
ENSXCOG00000006974	-	98	33.862	ENSVPAG00000003303	EIF2AK2	98	33.216	Vicugna_pacos
ENSXCOG00000006974	-	95	39.394	ENSVVUG00000018911	EIF2AK2	98	39.394	Vulpes_vulpes
ENSXCOG00000006974	-	81	45.492	ENSXETG00000025302	eif2ak2	96	35.663	Xenopus_tropicalis