EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000007082 (Gene tree)
Gene ID: -
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5678 bases
Position: chrKQ557207.1:13497394-13503071
Accession: ZDB-GENE-041001-215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000009313	DEAD	PF00270.29	6.2e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000009424	-	2238	-	ENSXCOP00000009313	745 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000007082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000007082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000007082	ddx1	53	32.857	ENSXCOG00000012364	ddx28	62	32.857
ENSXCOG00000007082	ddx1	53	48.000	ENSXCOG00000010120	ddx55	62	43.939
ENSXCOG00000007082	ddx1	54	49.153	ENSXCOG00000015880	ddx47	71	49.153
ENSXCOG00000007082	ddx1	53	36.066	ENSXCOG00000015774	ddx5	70	36.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000007082	ddx1	100	80.991	ENSG00000079785	DDX1	100	80.991	Homo_sapiens
ENSXCOG00000007082	ddx1	100	88.755	ENSAPOG00000003166	ddx1	100	88.755	Acanthochromis_polyacanthus
ENSXCOG00000007082	ddx1	99	81.099	ENSAMEG00000001071	DDX1	99	81.099	Ailuropoda_melanoleuca
ENSXCOG00000007082	ddx1	89	88.485	ENSACIG00000017422	ddx1	99	89.242	Amphilophus_citrinellus
ENSXCOG00000007082	ddx1	89	88.688	ENSAOCG00000015436	ddx1	94	88.688	Amphiprion_ocellaris
ENSXCOG00000007082	ddx1	100	89.692	ENSAPEG00000007699	ddx1	100	89.692	Amphiprion_percula
ENSXCOG00000007082	ddx1	94	90.780	ENSATEG00000003965	ddx1	98	89.879	Anabas_testudineus
ENSXCOG00000007082	ddx1	100	82.423	ENSAPLG00000011093	DDX1	100	82.423	Anas_platyrhynchos
ENSXCOG00000007082	ddx1	94	82.411	ENSACAG00000011036	DDX1	99	82.411	Anolis_carolinensis
ENSXCOG00000007082	ddx1	100	81.124	ENSANAG00000037912	DDX1	100	81.124	Aotus_nancymaae
ENSXCOG00000007082	ddx1	99	89.651	ENSACLG00000008850	ddx1	99	88.520	Astatotilapia_calliptera
ENSXCOG00000007082	ddx1	100	86.747	ENSAMXG00000002100	ddx1	100	86.747	Astyanax_mexicanus
ENSXCOG00000007082	ddx1	100	81.794	ENSBTAG00000009906	DDX1	100	81.794	Bos_taurus
ENSXCOG00000007082	ddx1	98	46.496	WBGene00021938	Y55F3BR.1	98	46.496	Caenorhabditis_elegans
ENSXCOG00000007082	ddx1	100	80.991	ENSCJAG00000007076	DDX1	100	80.991	Callithrix_jacchus
ENSXCOG00000007082	ddx1	100	81.660	ENSCAFG00000003686	DDX1	100	81.660	Canis_familiaris
ENSXCOG00000007082	ddx1	100	81.660	ENSCAFG00020026083	DDX1	100	81.660	Canis_lupus_dingo
ENSXCOG00000007082	ddx1	100	81.392	ENSCHIG00000011046	DDX1	100	81.392	Capra_hircus
ENSXCOG00000007082	ddx1	99	58.333	ENSTSYG00000037396	-	97	60.210	Carlito_syrichta
ENSXCOG00000007082	ddx1	100	81.526	ENSTSYG00000002477	-	100	81.526	Carlito_syrichta
ENSXCOG00000007082	ddx1	86	67.543	ENSCAPG00000008906	-	93	67.543	Cavia_aperea
ENSXCOG00000007082	ddx1	86	80.465	ENSCPOG00000009816	-	96	79.091	Cavia_porcellus
ENSXCOG00000007082	ddx1	68	79.175	ENSCPOG00000032467	-	100	79.175	Cavia_porcellus
ENSXCOG00000007082	ddx1	100	80.857	ENSCCAG00000030085	DDX1	100	80.857	Cebus_capucinus
ENSXCOG00000007082	ddx1	100	81.124	ENSCATG00000033924	DDX1	100	81.124	Cercocebus_atys
ENSXCOG00000007082	ddx1	100	81.660	ENSCLAG00000005434	DDX1	100	81.660	Chinchilla_lanigera
ENSXCOG00000007082	ddx1	100	81.124	ENSCSAG00000007883	DDX1	100	81.124	Chlorocebus_sabaeus
ENSXCOG00000007082	ddx1	70	83.178	ENSCHOG00000002171	DDX1	70	83.178	Choloepus_hoffmanni
ENSXCOG00000007082	ddx1	99	76.581	ENSCPBG00000013330	DDX1	99	81.558	Chrysemys_picta_bellii
ENSXCOG00000007082	ddx1	100	64.628	ENSCING00000001176	-	100	64.854	Ciona_intestinalis
ENSXCOG00000007082	ddx1	98	60.490	ENSCSAVG00000003028	-	99	60.490	Ciona_savignyi
ENSXCOG00000007082	ddx1	100	81.124	ENSCANG00000031530	DDX1	100	81.124	Colobus_angolensis_palliatus
ENSXCOG00000007082	ddx1	100	80.857	ENSCGRG00001013025	Ddx1	100	80.857	Cricetulus_griseus_chok1gshd
ENSXCOG00000007082	ddx1	100	80.857	ENSCGRG00000000676	Ddx1	100	80.857	Cricetulus_griseus_crigri
ENSXCOG00000007082	ddx1	99	89.879	ENSCSEG00000002630	ddx1	100	89.879	Cynoglossus_semilaevis
ENSXCOG00000007082	ddx1	99	91.903	ENSCVAG00000020927	ddx1	100	91.903	Cyprinodon_variegatus
ENSXCOG00000007082	ddx1	100	85.274	ENSDARG00000032117	ddx1	100	85.290	Danio_rerio
ENSXCOG00000007082	ddx1	100	81.526	ENSDNOG00000006905	DDX1	100	81.526	Dasypus_novemcinctus
ENSXCOG00000007082	ddx1	100	81.258	ENSDORG00000012847	Ddx1	100	81.258	Dipodomys_ordii
ENSXCOG00000007082	ddx1	98	57.973	FBgn0015075	Ddx1	99	58.378	Drosophila_melanogaster
ENSXCOG00000007082	ddx1	100	73.226	ENSETEG00000014259	DDX1	100	73.226	Echinops_telfairi
ENSXCOG00000007082	ddx1	64	73.486	ENSEBUG00000009800	-	99	73.486	Eptatretus_burgeri
ENSXCOG00000007082	ddx1	100	81.660	ENSEASG00005009335	DDX1	92	81.660	Equus_asinus_asinus
ENSXCOG00000007082	ddx1	94	80.682	ENSECAG00000016396	DDX1	100	80.682	Equus_caballus
ENSXCOG00000007082	ddx1	88	78.585	ENSEEUG00000001606	DDX1	89	78.585	Erinaceus_europaeus
ENSXCOG00000007082	ddx1	100	84.492	ENSELUG00000006743	ddx1	100	84.492	Esox_lucius
ENSXCOG00000007082	ddx1	100	81.258	ENSFCAG00000004680	DDX1	100	81.258	Felis_catus
ENSXCOG00000007082	ddx1	100	82.731	ENSFALG00000008696	DDX1	100	82.731	Ficedula_albicollis
ENSXCOG00000007082	ddx1	100	80.991	ENSFDAG00000021305	DDX1	100	80.991	Fukomys_damarensis
ENSXCOG00000007082	ddx1	100	91.700	ENSFHEG00000008444	ddx1	100	91.700	Fundulus_heteroclitus
ENSXCOG00000007082	ddx1	100	83.467	ENSGMOG00000011300	ddx1	100	83.467	Gadus_morhua
ENSXCOG00000007082	ddx1	100	82.195	ENSGALG00000016461	DDX1	100	82.195	Gallus_gallus
ENSXCOG00000007082	ddx1	100	95.448	ENSGAFG00000004706	ddx1	100	95.448	Gambusia_affinis
ENSXCOG00000007082	ddx1	100	86.881	ENSGACG00000011162	ddx1	100	86.881	Gasterosteus_aculeatus
ENSXCOG00000007082	ddx1	100	82.195	ENSGAGG00000021020	DDX1	100	82.195	Gopherus_agassizii
ENSXCOG00000007082	ddx1	100	80.991	ENSGGOG00000012482	DDX1	100	80.991	Gorilla_gorilla
ENSXCOG00000007082	ddx1	100	89.558	ENSHBUG00000014069	ddx1	100	89.558	Haplochromis_burtoni
ENSXCOG00000007082	ddx1	100	80.857	ENSHGLG00000000801	DDX1	100	80.857	Heterocephalus_glaber_female
ENSXCOG00000007082	ddx1	99	80.702	ENSHGLG00100000711	DDX1	100	80.702	Heterocephalus_glaber_male
ENSXCOG00000007082	ddx1	100	89.290	ENSHCOG00000011492	ddx1	96	89.290	Hippocampus_comes
ENSXCOG00000007082	ddx1	100	84.605	ENSIPUG00000003494	ddx1	100	84.605	Ictalurus_punctatus
ENSXCOG00000007082	ddx1	99	81.107	ENSSTOG00000003977	DDX1	100	81.107	Ictidomys_tridecemlineatus
ENSXCOG00000007082	ddx1	89	76.284	ENSJJAG00000013315	Ddx1	100	76.284	Jaculus_jaculus
ENSXCOG00000007082	ddx1	100	91.031	ENSKMAG00000011340	ddx1	100	91.031	Kryptolebias_marmoratus
ENSXCOG00000007082	ddx1	88	83.964	ENSLBEG00000008692	ddx1	99	83.964	Labrus_bergylta
ENSXCOG00000007082	ddx1	100	81.660	ENSLACG00000010529	DDX1	100	81.660	Latimeria_chalumnae
ENSXCOG00000007082	ddx1	100	83.134	ENSLOCG00000016473	ddx1	100	83.134	Lepisosteus_oculatus
ENSXCOG00000007082	ddx1	99	82.124	ENSLAFG00000002213	DDX1	99	82.124	Loxodonta_africana
ENSXCOG00000007082	ddx1	100	81.124	ENSMFAG00000033987	DDX1	100	81.124	Macaca_fascicularis
ENSXCOG00000007082	ddx1	100	81.124	ENSMMUG00000023437	DDX1	100	81.124	Macaca_mulatta
ENSXCOG00000007082	ddx1	100	81.124	ENSMNEG00000029189	DDX1	100	81.124	Macaca_nemestrina
ENSXCOG00000007082	ddx1	100	81.124	ENSMLEG00000030787	DDX1	100	81.124	Mandrillus_leucophaeus
ENSXCOG00000007082	ddx1	100	90.763	ENSMAMG00000015916	ddx1	100	90.763	Mastacembelus_armatus
ENSXCOG00000007082	ddx1	99	89.919	ENSMZEG00005015207	ddx1	99	88.822	Maylandia_zebra
ENSXCOG00000007082	ddx1	99	78.255	ENSMGAG00000014025	DDX1	100	78.255	Meleagris_gallopavo
ENSXCOG00000007082	ddx1	64	98.182	ENSMAUG00000016156	Ddx1	100	98.182	Mesocricetus_auratus
ENSXCOG00000007082	ddx1	100	81.392	ENSMICG00000001023	DDX1	100	81.392	Microcebus_murinus
ENSXCOG00000007082	ddx1	100	80.857	ENSMOCG00000000257	Ddx1	100	80.857	Microtus_ochrogaster
ENSXCOG00000007082	ddx1	89	87.009	ENSMMOG00000015397	ddx1	99	87.009	Mola_mola
ENSXCOG00000007082	ddx1	99	81.989	ENSMODG00000010275	DDX1	99	81.989	Monodelphis_domestica
ENSXCOG00000007082	ddx1	100	90.094	ENSMALG00000016409	ddx1	100	90.094	Monopterus_albus
ENSXCOG00000007082	ddx1	100	80.991	MGP_CAROLIEiJ_G0017622	Ddx1	100	80.991	Mus_caroli
ENSXCOG00000007082	ddx1	100	80.857	ENSMUSG00000037149	Ddx1	100	80.857	Mus_musculus
ENSXCOG00000007082	ddx1	100	81.124	MGP_PahariEiJ_G0029378	Ddx1	100	81.124	Mus_pahari
ENSXCOG00000007082	ddx1	100	80.857	MGP_SPRETEiJ_G0018464	Ddx1	97	86.538	Mus_spretus
ENSXCOG00000007082	ddx1	100	81.258	ENSMPUG00000013606	DDX1	100	81.258	Mustela_putorius_furo
ENSXCOG00000007082	ddx1	99	81.023	ENSMLUG00000003027	DDX1	98	81.023	Myotis_lucifugus
ENSXCOG00000007082	ddx1	99	80.837	ENSNGAG00000015783	Ddx1	100	80.837	Nannospalax_galili
ENSXCOG00000007082	ddx1	78	86.815	ENSNBRG00000020677	ddx1	94	86.815	Neolamprologus_brichardi
ENSXCOG00000007082	ddx1	100	81.124	ENSNLEG00000014417	DDX1	100	81.124	Nomascus_leucogenys
ENSXCOG00000007082	ddx1	99	80.352	ENSMEUG00000008254	DDX1	99	80.352	Notamacropus_eugenii
ENSXCOG00000007082	ddx1	100	57.697	ENSOPRG00000004290	DDX1	100	57.697	Ochotona_princeps
ENSXCOG00000007082	ddx1	100	81.660	ENSODEG00000000569	DDX1	100	81.660	Octodon_degus
ENSXCOG00000007082	ddx1	100	89.946	ENSONIG00000000513	ddx1	100	89.946	Oreochromis_niloticus
ENSXCOG00000007082	ddx1	76	79.115	ENSOANG00000005450	DDX1	99	79.115	Ornithorhynchus_anatinus
ENSXCOG00000007082	ddx1	100	81.392	ENSOCUG00000007010	DDX1	100	81.392	Oryctolagus_cuniculus
ENSXCOG00000007082	ddx1	100	89.290	ENSORLG00000016709	ddx1	100	89.290	Oryzias_latipes
ENSXCOG00000007082	ddx1	99	89.069	ENSORLG00020003290	ddx1	100	89.069	Oryzias_latipes_hni
ENSXCOG00000007082	ddx1	100	88.889	ENSORLG00015022438	ddx1	100	88.889	Oryzias_latipes_hsok
ENSXCOG00000007082	ddx1	100	84.698	ENSOMEG00000017620	ddx1	100	84.698	Oryzias_melastigma
ENSXCOG00000007082	ddx1	99	81.023	ENSOGAG00000008730	DDX1	100	81.023	Otolemur_garnettii
ENSXCOG00000007082	ddx1	99	81.023	ENSOARG00000016369	DDX1	100	81.023	Ovis_aries
ENSXCOG00000007082	ddx1	100	80.857	ENSPPAG00000027432	DDX1	100	80.857	Pan_paniscus
ENSXCOG00000007082	ddx1	100	81.258	ENSPPRG00000020556	DDX1	100	81.258	Panthera_pardus
ENSXCOG00000007082	ddx1	100	81.124	ENSPTIG00000008267	DDX1	100	81.124	Panthera_tigris_altaica
ENSXCOG00000007082	ddx1	100	80.857	ENSPTRG00000011670	DDX1	100	80.857	Pan_troglodytes
ENSXCOG00000007082	ddx1	100	81.124	ENSPANG00000025185	DDX1	100	81.124	Papio_anubis
ENSXCOG00000007082	ddx1	100	82.865	ENSPKIG00000012466	ddx1	100	82.996	Paramormyrops_kingsleyae
ENSXCOG00000007082	ddx1	54	81.638	ENSPSIG00000012292	DDX1	100	81.638	Pelodiscus_sinensis
ENSXCOG00000007082	ddx1	100	88.338	ENSPMGG00000000782	ddx1	100	88.338	Periophthalmus_magnuspinnatus
ENSXCOG00000007082	ddx1	100	81.258	ENSPEMG00000016389	Ddx1	100	81.258	Peromyscus_maniculatus_bairdii
ENSXCOG00000007082	ddx1	99	75.505	ENSPMAG00000009118	-	100	75.505	Petromyzon_marinus
ENSXCOG00000007082	ddx1	100	82.865	ENSPCIG00000010941	DDX1	100	82.865	Phascolarctos_cinereus
ENSXCOG00000007082	ddx1	86	93.231	ENSPFOG00000006873	-	100	93.231	Poecilia_formosa
ENSXCOG00000007082	ddx1	100	94.779	ENSPFOG00000011921	ddx1	100	94.779	Poecilia_formosa
ENSXCOG00000007082	ddx1	100	94.913	ENSPLAG00000005939	ddx1	100	94.913	Poecilia_latipinna
ENSXCOG00000007082	ddx1	100	95.047	ENSPMEG00000011140	ddx1	100	95.047	Poecilia_mexicana
ENSXCOG00000007082	ddx1	100	94.913	ENSPREG00000011751	ddx1	100	94.913	Poecilia_reticulata
ENSXCOG00000007082	ddx1	100	80.991	ENSPPYG00000012638	DDX1	100	80.991	Pongo_abelii
ENSXCOG00000007082	ddx1	100	70.067	ENSPCAG00000001491	DDX1	100	70.067	Procavia_capensis
ENSXCOG00000007082	ddx1	99	80.785	ENSPCOG00000028185	DDX1	99	80.785	Propithecus_coquereli
ENSXCOG00000007082	ddx1	100	81.258	ENSPVAG00000013618	DDX1	100	81.258	Pteropus_vampyrus
ENSXCOG00000007082	ddx1	100	89.396	ENSPNYG00000013839	ddx1	100	89.396	Pundamilia_nyererei
ENSXCOG00000007082	ddx1	89	84.441	ENSPNAG00000017033	ddx1	97	84.441	Pygocentrus_nattereri
ENSXCOG00000007082	ddx1	100	81.124	ENSRNOG00000006652	Ddx1	100	81.124	Rattus_norvegicus
ENSXCOG00000007082	ddx1	100	80.187	ENSRBIG00000041664	DDX1	100	80.222	Rhinopithecus_bieti
ENSXCOG00000007082	ddx1	100	80.857	ENSRROG00000031167	DDX1	100	80.857	Rhinopithecus_roxellana
ENSXCOG00000007082	ddx1	100	80.991	ENSSBOG00000027577	DDX1	100	80.991	Saimiri_boliviensis_boliviensis
ENSXCOG00000007082	ddx1	99	74.731	ENSSHAG00000009363	DDX1	99	74.731	Sarcophilus_harrisii
ENSXCOG00000007082	ddx1	100	84.203	ENSSFOG00015014476	ddx1	100	84.203	Scleropages_formosus
ENSXCOG00000007082	ddx1	100	89.023	ENSSMAG00000010094	ddx1	100	89.023	Scophthalmus_maximus
ENSXCOG00000007082	ddx1	100	89.692	ENSSDUG00000012334	ddx1	100	89.692	Seriola_dumerili
ENSXCOG00000007082	ddx1	100	89.157	ENSSLDG00000025345	ddx1	100	89.157	Seriola_lalandi_dorsalis
ENSXCOG00000007082	ddx1	99	75.778	ENSSARG00000004536	DDX1	100	75.778	Sorex_araneus
ENSXCOG00000007082	ddx1	100	80.991	ENSSPUG00000018835	DDX1	100	80.991	Sphenodon_punctatus
ENSXCOG00000007082	ddx1	100	84.471	ENSSPAG00000023554	ddx1	100	84.471	Stegastes_partitus
ENSXCOG00000007082	ddx1	100	81.392	ENSSSCG00000008619	DDX1	100	81.392	Sus_scrofa
ENSXCOG00000007082	ddx1	100	82.062	ENSTGUG00000013096	DDX1	100	82.062	Taeniopygia_guttata
ENSXCOG00000007082	ddx1	99	88.425	ENSTRUG00000015765	ddx1	99	88.425	Takifugu_rubripes
ENSXCOG00000007082	ddx1	100	88.889	ENSTNIG00000016309	ddx1	100	88.889	Tetraodon_nigroviridis
ENSXCOG00000007082	ddx1	99	77.868	ENSTBEG00000008454	DDX1	100	77.868	Tupaia_belangeri
ENSXCOG00000007082	ddx1	100	81.526	ENSTTRG00000005081	DDX1	100	81.526	Tursiops_truncatus
ENSXCOG00000007082	ddx1	63	78.326	ENSUAMG00000017375	DDX1	87	78.158	Ursus_americanus
ENSXCOG00000007082	ddx1	99	81.242	ENSUMAG00000023450	DDX1	100	81.242	Ursus_maritimus
ENSXCOG00000007082	ddx1	85	87.019	ENSVPAG00000007764	DDX1	85	87.019	Vicugna_pacos
ENSXCOG00000007082	ddx1	99	81.402	ENSVVUG00000013085	DDX1	96	81.402	Vulpes_vulpes
ENSXCOG00000007082	ddx1	100	81.526	ENSXETG00000017825	ddx1	100	81.526	Xenopus_tropicalis
ENSXCOG00000007082	ddx1	100	97.055	ENSXMAG00000004555	ddx1	100	97.055	Xiphophorus_maculatus