EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000007112 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 15145 bases
Position: chrKQ557225.1:39768153-39783297
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000009342	RNA_pol_Rpb1_5	PF04998.17	2e-69	1	1
ENSXCOP00000009342	RNA_pol_Rpb1_4	PF05000.17	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000009453	-	1554	-	ENSXCOP00000009342	517 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000007112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000007112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000007112	-	88	66.253	ENSAMXG00000011553	-	87	66.253	Astyanax_mexicanus
ENSXCOG00000007112	-	68	46.310	ENSCING00000007684	-	52	46.310	Ciona_intestinalis
ENSXCOG00000007112	-	91	62.828	MGP_CAROLIEiJ_G0028494	Polr1a	52	59.690	Mus_caroli
ENSXCOG00000007112	-	91	62.298	ENSMUSG00000049553	Polr1a	52	59.173	Mus_musculus
ENSXCOG00000007112	-	91	62.702	MGP_PahariEiJ_G0022230	Polr1a	52	59.690	Mus_pahari
ENSXCOG00000007112	-	91	62.500	MGP_SPRETEiJ_G0029499	Polr1a	52	59.432	Mus_spretus
ENSXCOG00000007112	-	99	58.271	ENSNLEG00000002264	POLR1A	79	61.602	Nomascus_leucogenys
ENSXCOG00000007112	-	58	63.291	ENSOANG00000015713	-	80	63.291	Ornithorhynchus_anatinus
ENSXCOG00000007112	-	86	83.929	ENSOMEG00000019310	-	87	83.929	Oryzias_melastigma