EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000007145 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-21k16.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5870 bases
Position: chrKQ557207.1:13576748-13582617
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000009382	G-patch	PF01585.23	8.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000009493	-	1542	-	ENSXCOP00000009382	513 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000007145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000007145's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000007145	si:ch73-21k16.4	99	51.941	ENSG00000092978	GPATCH2	94	51.044	Homo_sapiens
ENSXCOG00000007145	si:ch73-21k16.4	99	51.296	ENSAMEG00000000532	GPATCH2	94	50.951	Ailuropoda_melanoleuca
ENSXCOG00000007145	si:ch73-21k16.4	100	76.792	ENSACIG00000017628	si:ch73-21k16.4	100	76.792	Amphilophus_citrinellus
ENSXCOG00000007145	si:ch73-21k16.4	96	77.576	ENSAOCG00000020838	si:ch73-21k16.4	100	77.576	Amphiprion_ocellaris
ENSXCOG00000007145	si:ch73-21k16.4	100	80.755	ENSAPEG00000007324	si:ch73-21k16.4	100	80.755	Amphiprion_percula
ENSXCOG00000007145	si:ch73-21k16.4	100	79.142	ENSATEG00000003701	si:ch73-21k16.4	100	79.142	Anabas_testudineus
ENSXCOG00000007145	si:ch73-21k16.4	96	55.405	ENSAPLG00000005559	GPATCH2	99	54.247	Anas_platyrhynchos
ENSXCOG00000007145	si:ch73-21k16.4	97	53.030	ENSACAG00000014945	GPATCH2	93	51.985	Anolis_carolinensis
ENSXCOG00000007145	si:ch73-21k16.4	99	52.495	ENSANAG00000032851	GPATCH2	97	51.017	Aotus_nancymaae
ENSXCOG00000007145	si:ch73-21k16.4	100	81.474	ENSACLG00000008706	si:ch73-21k16.4	100	81.474	Astatotilapia_calliptera
ENSXCOG00000007145	si:ch73-21k16.4	100	68.061	ENSAMXG00000001662	si:ch73-21k16.4	100	68.061	Astyanax_mexicanus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.037	ENSBTAG00000001574	GPATCH2	97	50.556	Bos_taurus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.495	ENSCJAG00000047537	GPATCH2	88	51.017	Callithrix_jacchus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSCAFG00000010781	GPATCH2	94	51.423	Canis_familiaris
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSCHIG00000018042	GPATCH2	97	50.647	Capra_hircus
ENSXCOG00000007145	si:ch73-21k16.4	96	53.077	ENSCAPG00000007843	GPATCH2	96	51.538	Cavia_aperea
ENSXCOG00000007145	si:ch73-21k16.4	99	52.030	ENSCPOG00000003966	GPATCH2	94	51.136	Cavia_porcellus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.680	ENSCCAG00000010195	GPATCH2	94	51.803	Cebus_capucinus
ENSXCOG00000007145	si:ch73-21k16.4	99	53.484	ENSCATG00000038238	GPATCH2	94	52.805	Cercocebus_atys
ENSXCOG00000007145	si:ch73-21k16.4	99	52.214	ENSCLAG00000009274	GPATCH2	97	50.738	Chinchilla_lanigera
ENSXCOG00000007145	si:ch73-21k16.4	97	54.095	ENSCPBG00000013037	GPATCH2	97	52.762	Chrysemys_picta_bellii
ENSXCOG00000007145	si:ch73-21k16.4	99	51.756	ENSCANG00000031261	GPATCH2	95	50.471	Colobus_angolensis_palliatus
ENSXCOG00000007145	si:ch73-21k16.4	97	52.008	ENSCGRG00001024577	Gpatch2	94	50.854	Cricetulus_griseus_chok1gshd
ENSXCOG00000007145	si:ch73-21k16.4	97	52.008	ENSCGRG00000015039	Gpatch2	96	50.860	Cricetulus_griseus_crigri
ENSXCOG00000007145	si:ch73-21k16.4	100	79.735	ENSCSEG00000002545	si:ch73-21k16.4	100	79.735	Cynoglossus_semilaevis
ENSXCOG00000007145	si:ch73-21k16.4	100	88.973	ENSCVAG00000006306	si:ch73-21k16.4	100	88.973	Cyprinodon_variegatus
ENSXCOG00000007145	si:ch73-21k16.4	100	68.130	ENSDARG00000101260	GPATCH2	100	68.130	Danio_rerio
ENSXCOG00000007145	si:ch73-21k16.4	50	56.364	ENSDNOG00000000826	GPATCH2	94	56.727	Dasypus_novemcinctus
ENSXCOG00000007145	si:ch73-21k16.4	96	53.269	ENSDORG00000030155	Gpatch2	96	52.115	Dipodomys_ordii
ENSXCOG00000007145	si:ch73-21k16.4	99	49.442	ENSETEG00000012316	GPATCH2	97	48.885	Echinops_telfairi
ENSXCOG00000007145	si:ch73-21k16.4	79	40.000	ENSEBUG00000014275	si:ch73-21k16.4	77	40.940	Eptatretus_burgeri
ENSXCOG00000007145	si:ch73-21k16.4	99	51.941	ENSEASG00005003507	GPATCH2	94	51.044	Equus_asinus_asinus
ENSXCOG00000007145	si:ch73-21k16.4	99	51.941	ENSECAG00000013263	GPATCH2	94	51.044	Equus_caballus
ENSXCOG00000007145	si:ch73-21k16.4	96	50.095	ENSEEUG00000008748	GPATCH2	96	50.664	Erinaceus_europaeus
ENSXCOG00000007145	si:ch73-21k16.4	100	72.624	ENSELUG00000004934	si:ch73-21k16.4	100	72.624	Esox_lucius
ENSXCOG00000007145	si:ch73-21k16.4	99	52.416	ENSFCAG00000007129	GPATCH2	94	51.718	Felis_catus
ENSXCOG00000007145	si:ch73-21k16.4	97	54.857	ENSFALG00000012223	GPATCH2	97	53.422	Ficedula_albicollis
ENSXCOG00000007145	si:ch73-21k16.4	96	51.257	ENSFDAG00000011026	GPATCH2	96	49.903	Fukomys_damarensis
ENSXCOG00000007145	si:ch73-21k16.4	78	89.286	ENSFHEG00000008699	si:ch73-21k16.4	92	87.732	Fundulus_heteroclitus
ENSXCOG00000007145	si:ch73-21k16.4	81	78.295	ENSGMOG00000001595	si:ch73-21k16.4	82	78.295	Gadus_morhua
ENSXCOG00000007145	si:ch73-21k16.4	97	54.876	ENSGALG00000009627	GPATCH2	97	53.728	Gallus_gallus
ENSXCOG00000007145	si:ch73-21k16.4	100	92.205	ENSGAFG00000005041	si:ch73-21k16.4	100	92.205	Gambusia_affinis
ENSXCOG00000007145	si:ch73-21k16.4	99	79.810	ENSGACG00000013427	si:ch73-21k16.4	100	79.810	Gasterosteus_aculeatus
ENSXCOG00000007145	si:ch73-21k16.4	97	53.626	ENSGAGG00000013122	GPATCH2	97	52.190	Gopherus_agassizii
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSGGOG00000009440	GPATCH2	95	50.847	Gorilla_gorilla
ENSXCOG00000007145	si:ch73-21k16.4	100	81.474	ENSHBUG00000014399	si:ch73-21k16.4	100	81.474	Haplochromis_burtoni
ENSXCOG00000007145	si:ch73-21k16.4	99	51.941	ENSHGLG00000019513	GPATCH2	97	50.832	Heterocephalus_glaber_female
ENSXCOG00000007145	si:ch73-21k16.4	99	51.941	ENSHGLG00100003689	GPATCH2	97	50.832	Heterocephalus_glaber_male
ENSXCOG00000007145	si:ch73-21k16.4	100	67.500	ENSHCOG00000011331	si:ch73-21k16.4	100	67.692	Hippocampus_comes
ENSXCOG00000007145	si:ch73-21k16.4	100	55.810	ENSIPUG00000012840	si:ch73-21k16.4	100	55.364	Ictalurus_punctatus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.030	ENSSTOG00000024959	GPATCH2	96	49.904	Ictidomys_tridecemlineatus
ENSXCOG00000007145	si:ch73-21k16.4	98	51.601	ENSJJAG00000019244	Gpatch2	94	50.282	Jaculus_jaculus
ENSXCOG00000007145	si:ch73-21k16.4	100	80.529	ENSLBEG00000008187	si:ch73-21k16.4	100	80.529	Labrus_bergylta
ENSXCOG00000007145	si:ch73-21k16.4	97	56.538	ENSLACG00000013951	GPATCH2	97	56.538	Latimeria_chalumnae
ENSXCOG00000007145	si:ch73-21k16.4	100	58.692	ENSLOCG00000016058	si:ch73-21k16.4	100	58.879	Lepisosteus_oculatus
ENSXCOG00000007145	si:ch73-21k16.4	96	52.490	ENSLAFG00000003787	GPATCH2	97	50.958	Loxodonta_africana
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSMFAG00000000617	GPATCH2	94	51.233	Macaca_fascicularis
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSMMUG00000014946	GPATCH2	94	51.233	Macaca_mulatta
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSMNEG00000034969	GPATCH2	96	51.149	Macaca_nemestrina
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSMLEG00000032285	GPATCH2	95	50.847	Mandrillus_leucophaeus
ENSXCOG00000007145	si:ch73-21k16.4	100	82.453	ENSMAMG00000015684	si:ch73-21k16.4	100	82.453	Mastacembelus_armatus
ENSXCOG00000007145	si:ch73-21k16.4	100	81.474	ENSMZEG00005015040	si:ch73-21k16.4	100	81.474	Maylandia_zebra
ENSXCOG00000007145	si:ch73-21k16.4	56	57.566	ENSMGAG00000009428	GPATCH2	93	57.827	Meleagris_gallopavo
ENSXCOG00000007145	si:ch73-21k16.4	99	54.215	ENSMAUG00000004851	Gpatch2	96	52.562	Mesocricetus_auratus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSMICG00000037090	GPATCH2	94	51.423	Microcebus_murinus
ENSXCOG00000007145	si:ch73-21k16.4	97	52.581	ENSMOCG00000020821	Gpatch2	97	50.276	Microtus_ochrogaster
ENSXCOG00000007145	si:ch73-21k16.4	100	75.238	ENSMMOG00000015329	si:ch73-21k16.4	100	75.429	Mola_mola
ENSXCOG00000007145	si:ch73-21k16.4	99	50.741	ENSMODG00000004195	GPATCH2	93	50.832	Monodelphis_domestica
ENSXCOG00000007145	si:ch73-21k16.4	100	77.969	ENSMALG00000016801	si:ch73-21k16.4	100	77.969	Monopterus_albus
ENSXCOG00000007145	si:ch73-21k16.4	97	51.992	MGP_CAROLIEiJ_G0015030	Gpatch2	96	50.097	Mus_caroli
ENSXCOG00000007145	si:ch73-21k16.4	99	51.111	ENSMUSG00000039210	Gpatch2	96	49.710	Mus_musculus
ENSXCOG00000007145	si:ch73-21k16.4	97	52.075	MGP_PahariEiJ_G0028262	Gpatch2	96	50.769	Mus_pahari
ENSXCOG00000007145	si:ch73-21k16.4	99	49.808	MGP_SPRETEiJ_G0015830	Gpatch2	96	49.903	Mus_spretus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.311	ENSMPUG00000004269	GPATCH2	94	51.803	Mustela_putorius_furo
ENSXCOG00000007145	si:ch73-21k16.4	98	50.947	ENSNGAG00000002207	Gpatch2	94	50.000	Nannospalax_galili
ENSXCOG00000007145	si:ch73-21k16.4	100	80.117	ENSNBRG00000020932	si:ch73-21k16.4	100	80.117	Neolamprologus_brichardi
ENSXCOG00000007145	si:ch73-21k16.4	99	52.311	ENSNLEG00000014201	GPATCH2	95	51.068	Nomascus_leucogenys
ENSXCOG00000007145	si:ch73-21k16.4	96	49.038	ENSMEUG00000012239	GPATCH2	96	47.692	Notamacropus_eugenii
ENSXCOG00000007145	si:ch73-21k16.4	99	50.092	ENSOPRG00000010126	GPATCH2	97	48.524	Ochotona_princeps
ENSXCOG00000007145	si:ch73-21k16.4	99	51.107	ENSODEG00000014927	GPATCH2	97	49.815	Octodon_degus
ENSXCOG00000007145	si:ch73-21k16.4	100	81.474	ENSONIG00000000570	si:ch73-21k16.4	100	81.474	Oreochromis_niloticus
ENSXCOG00000007145	si:ch73-21k16.4	96	49.553	ENSOANG00000008549	GPATCH2	81	69.725	Ornithorhynchus_anatinus
ENSXCOG00000007145	si:ch73-21k16.4	97	52.941	ENSOCUG00000014512	GPATCH2	94	51.613	Oryctolagus_cuniculus
ENSXCOG00000007145	si:ch73-21k16.4	100	81.784	ENSORLG00000016810	si:ch73-21k16.4	100	81.784	Oryzias_latipes
ENSXCOG00000007145	si:ch73-21k16.4	100	82.231	ENSORLG00020003127	si:ch73-21k16.4	100	82.231	Oryzias_latipes_hni
ENSXCOG00000007145	si:ch73-21k16.4	100	80.755	ENSORLG00015022304	si:ch73-21k16.4	100	80.755	Oryzias_latipes_hsok
ENSXCOG00000007145	si:ch73-21k16.4	100	81.664	ENSOMEG00000017809	si:ch73-21k16.4	100	82.249	Oryzias_melastigma
ENSXCOG00000007145	si:ch73-21k16.4	99	53.050	ENSOGAG00000004485	GPATCH2	97	51.571	Otolemur_garnettii
ENSXCOG00000007145	si:ch73-21k16.4	99	52.495	ENSOARG00000011440	GPATCH2	97	51.017	Ovis_aries
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSPPAG00000038887	GPATCH2	97	50.647	Pan_paniscus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.222	ENSPPRG00000013363	GPATCH2	94	51.711	Panthera_pardus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSPTRG00000001986	GPATCH2	97	50.647	Pan_troglodytes
ENSXCOG00000007145	si:ch73-21k16.4	99	51.941	ENSPANG00000020943	GPATCH2	95	50.471	Papio_anubis
ENSXCOG00000007145	si:ch73-21k16.4	100	65.784	ENSPKIG00000004245	si:ch73-21k16.4	100	65.784	Paramormyrops_kingsleyae
ENSXCOG00000007145	si:ch73-21k16.4	97	55.344	ENSPSIG00000005373	GPATCH2	97	54.095	Pelodiscus_sinensis
ENSXCOG00000007145	si:ch73-21k16.4	100	76.209	ENSPMGG00000000611	si:ch73-21k16.4	100	76.209	Periophthalmus_magnuspinnatus
ENSXCOG00000007145	si:ch73-21k16.4	96	52.207	ENSPEMG00000018364	Gpatch2	95	51.141	Peromyscus_maniculatus_bairdii
ENSXCOG00000007145	si:ch73-21k16.4	99	52.407	ENSPCIG00000027888	GPATCH2	97	51.017	Phascolarctos_cinereus
ENSXCOG00000007145	si:ch73-21k16.4	100	92.966	ENSPFOG00000008062	si:ch73-21k16.4	100	92.966	Poecilia_formosa
ENSXCOG00000007145	si:ch73-21k16.4	100	92.966	ENSPLAG00000022219	si:ch73-21k16.4	100	92.966	Poecilia_latipinna
ENSXCOG00000007145	si:ch73-21k16.4	100	92.776	ENSPMEG00000010687	si:ch73-21k16.4	100	92.776	Poecilia_mexicana
ENSXCOG00000007145	si:ch73-21k16.4	99	95.192	ENSPREG00000011915	si:ch73-21k16.4	98	95.192	Poecilia_reticulata
ENSXCOG00000007145	si:ch73-21k16.4	99	47.689	ENSPPYG00000000216	GPATCH2	94	46.679	Pongo_abelii
ENSXCOG00000007145	si:ch73-21k16.4	96	42.912	ENSPCAG00000013998	GPATCH2	99	42.912	Procavia_capensis
ENSXCOG00000007145	si:ch73-21k16.4	99	51.838	ENSPVAG00000010649	GPATCH2	96	50.551	Pteropus_vampyrus
ENSXCOG00000007145	si:ch73-21k16.4	100	81.474	ENSPNYG00000014144	si:ch73-21k16.4	100	81.474	Pundamilia_nyererei
ENSXCOG00000007145	si:ch73-21k16.4	99	51.941	ENSRROG00000012833	GPATCH2	95	50.659	Rhinopithecus_roxellana
ENSXCOG00000007145	si:ch73-21k16.4	99	52.126	ENSSBOG00000028891	GPATCH2	96	50.480	Saimiri_boliviensis_boliviensis
ENSXCOG00000007145	si:ch73-21k16.4	96	51.606	ENSSHAG00000015123	GPATCH2	95	50.201	Sarcophilus_harrisii
ENSXCOG00000007145	si:ch73-21k16.4	100	63.551	ENSSFOG00015000674	gpatch2	100	62.617	Scleropages_formosus
ENSXCOG00000007145	si:ch73-21k16.4	100	81.321	ENSSMAG00000009585	si:ch73-21k16.4	100	81.698	Scophthalmus_maximus
ENSXCOG00000007145	si:ch73-21k16.4	100	83.365	ENSSDUG00000011998	si:ch73-21k16.4	100	83.365	Seriola_dumerili
ENSXCOG00000007145	si:ch73-21k16.4	100	83.554	ENSSLDG00000025385	si:ch73-21k16.4	100	83.554	Seriola_lalandi_dorsalis
ENSXCOG00000007145	si:ch73-21k16.4	96	52.682	ENSSARG00000013063	GPATCH2	96	51.341	Sorex_araneus
ENSXCOG00000007145	si:ch73-21k16.4	100	84.121	ENSSPAG00000023569	si:ch73-21k16.4	100	84.121	Stegastes_partitus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.768	ENSSSCG00000027207	GPATCH2	97	51.476	Sus_scrofa
ENSXCOG00000007145	si:ch73-21k16.4	100	79.811	ENSTRUG00000015569	si:ch73-21k16.4	100	79.811	Takifugu_rubripes
ENSXCOG00000007145	si:ch73-21k16.4	97	77.132	ENSTNIG00000016304	si:ch73-21k16.4	96	77.907	Tetraodon_nigroviridis
ENSXCOG00000007145	si:ch73-21k16.4	64	67.442	ENSTTRG00000003739	GPATCH2	76	86.207	Tursiops_truncatus
ENSXCOG00000007145	si:ch73-21k16.4	99	51.941	ENSUMAG00000020588	GPATCH2	96	51.064	Ursus_maritimus
ENSXCOG00000007145	si:ch73-21k16.4	99	52.311	ENSVPAG00000005192	GPATCH2	97	50.923	Vicugna_pacos
ENSXCOG00000007145	si:ch73-21k16.4	99	52.311	ENSVVUG00000012998	GPATCH2	94	51.613	Vulpes_vulpes
ENSXCOG00000007145	si:ch73-21k16.4	97	54.493	ENSXETG00000021194	gpatch2	94	53.537	Xenopus_tropicalis
ENSXCOG00000007145	si:ch73-21k16.4	100	94.253	ENSXMAG00000004679	si:ch73-21k16.4	100	94.253	Xiphophorus_maculatus