EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000007204 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 7384 bases
Position: chrKQ557224.1:25602062-25609445
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000009458	zf-CCHC	PF00098.23	9.7e-10	1	2
ENSXCOP00000009458	zf-CCHC	PF00098.23	9.7e-10	2	2
ENSXCOP00000009458	PAP_assoc	PF03828.19	6.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000009569	-	1956	-	ENSXCOP00000009458	651 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000007204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000007204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000007204	-	55	66.667	ENSXCOG00000009445	-	53	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000007204	-	98	61.424	ENSG00000134744	TUT4	98	61.194	Homo_sapiens
ENSXCOG00000007204	-	54	78.592	ENSAPOG00000018983	-	95	78.592	Acanthochromis_polyacanthus
ENSXCOG00000007204	-	98	62.222	ENSAMEG00000009340	TUT4	58	62.667	Ailuropoda_melanoleuca
ENSXCOG00000007204	-	50	72.086	ENSACIG00000018887	-	63	60.440	Amphilophus_citrinellus
ENSXCOG00000007204	-	100	81.548	ENSACIG00000018199	TUT4	99	81.994	Amphilophus_citrinellus
ENSXCOG00000007204	-	100	82.774	ENSAOCG00000007862	TUT4	63	82.774	Amphiprion_ocellaris
ENSXCOG00000007204	-	100	82.920	ENSAPEG00000019857	TUT4	66	82.920	Amphiprion_percula
ENSXCOG00000007204	-	100	81.752	ENSATEG00000003823	TUT4	66	82.190	Anabas_testudineus
ENSXCOG00000007204	-	56	67.273	ENSATEG00000022516	-	93	56.891	Anabas_testudineus
ENSXCOG00000007204	-	98	67.023	ENSAPLG00000006345	TUT4	60	67.023	Anas_platyrhynchos
ENSXCOG00000007204	-	100	62.099	ENSACAG00000008282	TUT4	61	62.536	Anolis_carolinensis
ENSXCOG00000007204	-	98	58.896	ENSANAG00000013486	TUT4	58	58.896	Aotus_nancymaae
ENSXCOG00000007204	-	100	81.022	ENSACLG00000023312	TUT4	67	81.460	Astatotilapia_calliptera
ENSXCOG00000007204	-	100	69.489	ENSAMXG00000007030	TUT4	64	69.927	Astyanax_mexicanus
ENSXCOG00000007204	-	98	62.537	ENSBTAG00000002721	TUT4	58	62.687	Bos_taurus
ENSXCOG00000007204	-	98	61.721	ENSCJAG00000021588	TUT4	58	62.166	Callithrix_jacchus
ENSXCOG00000007204	-	98	62.222	ENSCAFG00000003734	TUT4	58	62.519	Canis_familiaris
ENSXCOG00000007204	-	89	66.893	ENSCAFG00020010923	-	91	66.893	Canis_lupus_dingo
ENSXCOG00000007204	-	100	60.203	ENSCHIG00000023944	TUT4	57	62.126	Capra_hircus
ENSXCOG00000007204	-	97	61.469	ENSTSYG00000009885	TUT4	62	61.721	Carlito_syrichta
ENSXCOG00000007204	-	97	56.662	ENSCAPG00000005680	TUT4	61	57.427	Cavia_aperea
ENSXCOG00000007204	-	97	61.515	ENSCPOG00000005086	TUT4	59	63.102	Cavia_porcellus
ENSXCOG00000007204	-	66	72.727	ENSCCAG00000036903	TUT4	52	76.112	Cebus_capucinus
ENSXCOG00000007204	-	56	58.974	ENSCCAG00000025142	-	93	50.739	Cebus_capucinus
ENSXCOG00000007204	-	98	61.481	ENSCATG00000024618	TUT4	56	71.279	Cercocebus_atys
ENSXCOG00000007204	-	97	63.014	ENSCLAG00000005255	TUT4	57	63.623	Chinchilla_lanigera
ENSXCOG00000007204	-	98	62.074	ENSCSAG00000001277	TUT4	58	62.222	Chlorocebus_sabaeus
ENSXCOG00000007204	-	99	85.450	ENSCPBG00000014796	TUT4	58	85.450	Chrysemys_picta_bellii
ENSXCOG00000007204	-	98	61.176	ENSCANG00000036212	TUT4	59	61.912	Colobus_angolensis_palliatus
ENSXCOG00000007204	-	96	63.411	ENSCGRG00001020315	-	56	64.341	Cricetulus_griseus_chok1gshd
ENSXCOG00000007204	-	96	63.411	ENSCGRG00000017571	Tut4	56	64.341	Cricetulus_griseus_crigri
ENSXCOG00000007204	-	100	81.081	ENSCSEG00000002476	TUT4	100	81.682	Cynoglossus_semilaevis
ENSXCOG00000007204	-	100	85.229	ENSCVAG00000012659	TUT4	66	85.229	Cyprinodon_variegatus
ENSXCOG00000007204	-	100	71.875	ENSDARG00000101404	CABZ01065131.1	100	71.791	Danio_rerio
ENSXCOG00000007204	-	98	61.185	ENSDNOG00000013920	TUT4	57	61.926	Dasypus_novemcinctus
ENSXCOG00000007204	-	98	63.063	ENSDORG00000027891	Tut4	62	63.514	Dipodomys_ordii
ENSXCOG00000007204	-	55	63.760	ENSEBUG00000009834	TUT4	59	63.760	Eptatretus_burgeri
ENSXCOG00000007204	-	98	61.883	ENSECAG00000021261	TUT4	61	62.033	Equus_caballus
ENSXCOG00000007204	-	100	73.153	ENSELUG00000024167	TUT4	65	75.214	Esox_lucius
ENSXCOG00000007204	-	98	62.222	ENSFCAG00000003246	TUT4	58	62.519	Felis_catus
ENSXCOG00000007204	-	100	66.276	ENSFALG00000005607	TUT4	61	66.422	Ficedula_albicollis
ENSXCOG00000007204	-	97	63.293	ENSFDAG00000016676	TUT4	57	63.595	Fukomys_damarensis
ENSXCOG00000007204	-	96	87.812	ENSFHEG00000002296	-	97	88.438	Fundulus_heteroclitus
ENSXCOG00000007204	-	96	72.377	ENSGMOG00000001281	TUT4	72	72.685	Gadus_morhua
ENSXCOG00000007204	-	98	66.463	ENSGALG00000010629	TUT4	61	66.463	Gallus_gallus
ENSXCOG00000007204	-	100	97.703	ENSGAFG00000011427	-	100	97.703	Gambusia_affinis
ENSXCOG00000007204	-	98	77.677	ENSGACG00000005282	-	72	77.677	Gasterosteus_aculeatus
ENSXCOG00000007204	-	98	63.318	ENSGAGG00000020531	TUT4	54	63.318	Gopherus_agassizii
ENSXCOG00000007204	-	93	81.021	ENSHBUG00000008564	-	99	81.499	Haplochromis_burtoni
ENSXCOG00000007204	-	97	63.293	ENSHGLG00000000804	TUT4	57	63.595	Heterocephalus_glaber_female
ENSXCOG00000007204	-	97	63.293	ENSHGLG00100002051	TUT4	58	63.595	Heterocephalus_glaber_male
ENSXCOG00000007204	-	100	74.260	ENSHCOG00000009746	-	100	74.260	Hippocampus_comes
ENSXCOG00000007204	-	100	66.319	ENSIPUG00000002638	zcchc11	64	67.814	Ictalurus_punctatus
ENSXCOG00000007204	-	98	62.687	ENSSTOG00000015611	TUT4	61	62.836	Ictidomys_tridecemlineatus
ENSXCOG00000007204	-	100	82.122	ENSKMAG00000017970	TUT4	100	82.122	Kryptolebias_marmoratus
ENSXCOG00000007204	-	100	81.977	ENSLBEG00000006518	TUT4	65	81.977	Labrus_bergylta
ENSXCOG00000007204	-	100	61.966	ENSLACG00000010748	TUT4	58	63.286	Latimeria_chalumnae
ENSXCOG00000007204	-	100	72.141	ENSLOCG00000006248	TUT4	69	72.141	Lepisosteus_oculatus
ENSXCOG00000007204	-	97	63.024	ENSLAFG00000003763	TUT4	57	75.459	Loxodonta_africana
ENSXCOG00000007204	-	98	62.074	ENSMFAG00000011842	TUT4	58	62.222	Macaca_fascicularis
ENSXCOG00000007204	-	94	61.927	ENSMMUG00000017023	TUT4	58	62.080	Macaca_mulatta
ENSXCOG00000007204	-	98	61.176	ENSMNEG00000009839	TUT4	61	61.912	Macaca_nemestrina
ENSXCOG00000007204	-	98	61.481	ENSMLEG00000036158	TUT4	58	62.222	Mandrillus_leucophaeus
ENSXCOG00000007204	-	100	80.876	ENSMAMG00000014890	TUT4	65	80.730	Mastacembelus_armatus
ENSXCOG00000007204	-	100	81.022	ENSMZEG00005017227	TUT4	65	81.460	Maylandia_zebra
ENSXCOG00000007204	-	98	66.667	ENSMGAG00000011185	TUT4	71	66.667	Meleagris_gallopavo
ENSXCOG00000007204	-	98	61.721	ENSMICG00000015853	TUT4	57	62.315	Microcebus_murinus
ENSXCOG00000007204	-	55	58.462	ENSMMOG00000017546	-	53	58.462	Mola_mola
ENSXCOG00000007204	-	100	76.621	ENSMMOG00000016870	-	100	76.621	Mola_mola
ENSXCOG00000007204	-	99	63.459	ENSMODG00000000618	TUT4	60	65.060	Monodelphis_domestica
ENSXCOG00000007204	-	100	78.940	ENSMALG00000014488	-	100	78.940	Monopterus_albus
ENSXCOG00000007204	-	96	63.495	MGP_CAROLIEiJ_G0026268	Tut4	56	64.587	Mus_caroli
ENSXCOG00000007204	-	96	63.495	ENSMUSG00000034610	Tut4	56	64.587	Mus_musculus
ENSXCOG00000007204	-	96	63.495	MGP_PahariEiJ_G0028601	Tut4	56	64.587	Mus_pahari
ENSXCOG00000007204	-	96	63.495	MGP_SPRETEiJ_G0027237	Tut4	56	64.587	Mus_spretus
ENSXCOG00000007204	-	98	62.236	ENSMPUG00000006880	TUT4	57	62.538	Mustela_putorius_furo
ENSXCOG00000007204	-	98	62.369	ENSMLUG00000001067	TUT4	57	62.462	Myotis_lucifugus
ENSXCOG00000007204	-	100	80.207	ENSNBRG00000005683	-	100	80.650	Neolamprologus_brichardi
ENSXCOG00000007204	-	98	62.763	ENSNLEG00000017998	TUT4	58	63.063	Nomascus_leucogenys
ENSXCOG00000007204	-	96	62.561	ENSMEUG00000003865	TUT4	55	64.448	Notamacropus_eugenii
ENSXCOG00000007204	-	97	61.422	ENSODEG00000007328	TUT4	57	62.179	Octodon_degus
ENSXCOG00000007204	-	100	81.168	ENSONIG00000019455	TUT4	71	78.182	Oreochromis_niloticus
ENSXCOG00000007204	-	88	63.948	ENSOANG00000012864	TUT4	57	64.274	Ornithorhynchus_anatinus
ENSXCOG00000007204	-	98	61.721	ENSOCUG00000002390	TUT4	56	66.422	Oryctolagus_cuniculus
ENSXCOG00000007204	-	100	75.708	ENSORLG00000013135	-	100	75.708	Oryzias_latipes
ENSXCOG00000007204	-	100	75.559	ENSORLG00020002631	-	100	75.559	Oryzias_latipes_hni
ENSXCOG00000007204	-	100	76.155	ENSORLG00015001219	-	100	76.155	Oryzias_latipes_hsok
ENSXCOG00000007204	-	100	76.418	ENSOMEG00000015574	-	100	76.418	Oryzias_melastigma
ENSXCOG00000007204	-	97	60.682	ENSOGAG00000005425	TUT4	58	60.793	Otolemur_garnettii
ENSXCOG00000007204	-	97	62.126	ENSOARG00000005494	TUT4	57	62.874	Ovis_aries
ENSXCOG00000007204	-	98	61.176	ENSPPAG00000037653	TUT4	57	64.590	Pan_paniscus
ENSXCOG00000007204	-	98	62.222	ENSPPRG00000020521	TUT4	58	62.519	Panthera_pardus
ENSXCOG00000007204	-	98	62.222	ENSPTIG00000010511	TUT4	58	62.519	Panthera_tigris_altaica
ENSXCOG00000007204	-	98	61.481	ENSPTRG00000000740	TUT4	59	61.912	Pan_troglodytes
ENSXCOG00000007204	-	98	59.559	ENSPANG00000005042	TUT4	58	60.294	Papio_anubis
ENSXCOG00000007204	-	100	70.700	ENSPKIG00000004670	TUT4	94	70.700	Paramormyrops_kingsleyae
ENSXCOG00000007204	-	98	66.514	ENSPSIG00000016704	TUT4	58	66.514	Pelodiscus_sinensis
ENSXCOG00000007204	-	51	94.118	ENSPMGG00000015621	-	66	94.118	Periophthalmus_magnuspinnatus
ENSXCOG00000007204	-	100	61.449	ENSPCIG00000022380	TUT4	60	64.629	Phascolarctos_cinereus
ENSXCOG00000007204	-	100	85.359	ENSPFOG00000002439	TUT4	69	85.505	Poecilia_formosa
ENSXCOG00000007204	-	100	97.550	ENSPLAG00000008701	-	100	97.550	Poecilia_latipinna
ENSXCOG00000007204	-	100	97.086	ENSPMEG00000006996	-	100	97.086	Poecilia_mexicana
ENSXCOG00000007204	-	98	62.537	ENSPPYG00000001347	TUT4	58	62.687	Pongo_abelii
ENSXCOG00000007204	-	98	91.720	ENSPCAG00000013380	TUT4	63	91.720	Procavia_capensis
ENSXCOG00000007204	-	98	61.218	ENSPCOG00000007824	TUT4	60	61.813	Propithecus_coquereli
ENSXCOG00000007204	-	98	61.905	ENSPVAG00000009804	TUT4	59	62.351	Pteropus_vampyrus
ENSXCOG00000007204	-	100	81.022	ENSPNYG00000023175	TUT4	65	81.460	Pundamilia_nyererei
ENSXCOG00000007204	-	100	70.425	ENSPNAG00000022786	TUT4	64	71.742	Pygocentrus_nattereri
ENSXCOG00000007204	-	98	57.333	ENSRBIG00000027989	TUT4	58	58.074	Rhinopithecus_bieti
ENSXCOG00000007204	-	98	61.481	ENSRROG00000034868	TUT4	68	62.222	Rhinopithecus_roxellana
ENSXCOG00000007204	-	56	58.741	ENSSBOG00000020099	-	93	50.493	Saimiri_boliviensis_boliviensis
ENSXCOG00000007204	-	98	61.573	ENSSBOG00000013661	TUT4	58	62.166	Saimiri_boliviensis_boliviensis
ENSXCOG00000007204	-	97	63.467	ENSSHAG00000006231	TUT4	59	64.551	Sarcophilus_harrisii
ENSXCOG00000007204	-	100	71.072	ENSSFOG00015013524	zcchc11	64	71.512	Scleropages_formosus
ENSXCOG00000007204	-	100	81.645	ENSSMAG00000016072	TUT4	70	81.645	Scophthalmus_maximus
ENSXCOG00000007204	-	100	83.041	ENSSDUG00000021923	TUT4	100	83.041	Seriola_dumerili
ENSXCOG00000007204	-	100	82.895	ENSSLDG00000016071	TUT4	65	82.895	Seriola_lalandi_dorsalis
ENSXCOG00000007204	-	100	62.209	ENSSPUG00000013287	TUT4	66	62.209	Sphenodon_punctatus
ENSXCOG00000007204	-	100	75.766	ENSSPAG00000008141	-	100	75.766	Stegastes_partitus
ENSXCOG00000007204	-	97	62.896	ENSSSCG00000003859	TUT4	55	73.093	Sus_scrofa
ENSXCOG00000007204	-	98	67.634	ENSTGUG00000009011	TUT4	60	67.634	Taeniopygia_guttata
ENSXCOG00000007204	-	60	70.998	ENSTRUG00000024719	-	98	70.998	Takifugu_rubripes
ENSXCOG00000007204	-	98	61.333	ENSTTRG00000016142	TUT4	58	62.074	Tursiops_truncatus
ENSXCOG00000007204	-	100	62.555	ENSUAMG00000000759	TUT4	64	79.337	Ursus_americanus
ENSXCOG00000007204	-	98	61.769	ENSUMAG00000022669	TUT4	58	62.069	Ursus_maritimus
ENSXCOG00000007204	-	98	58.507	ENSVPAG00000000910	TUT4	53	59.104	Vicugna_pacos
ENSXCOG00000007204	-	100	62.408	ENSVVUG00000002703	TUT4	86	66.723	Vulpes_vulpes
ENSXCOG00000007204	-	100	62.003	ENSXETG00000008061	tut4	65	62.925	Xenopus_tropicalis
ENSXCOG00000007204	-	100	99.539	ENSXMAG00000000751	-	100	99.539	Xiphophorus_maculatus