EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000007369 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6576 bases
Position: chrKQ557221.1:2930358-2936933
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000009687	RRM_1	PF00076.22	4.2e-39	1	4
ENSXCOP00000009687	RRM_1	PF00076.22	4.2e-39	2	4
ENSXCOP00000009687	RRM_1	PF00076.22	4.2e-39	3	4
ENSXCOP00000009687	RRM_1	PF00076.22	4.2e-39	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000009801	-	1224	-	ENSXCOP00000009687	407 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000007369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000007369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000007369	-	89	35.263	ENSXCOG00000003524	ncl	90	32.456

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000007369	-	93	52.088	ENSAPOG00000014534	-	69	52.088	Acanthochromis_polyacanthus
ENSXCOG00000007369	-	89	41.316	ENSAPOG00000023888	ncl	57	40.769	Acanthochromis_polyacanthus
ENSXCOG00000007369	-	89	40.584	ENSACIG00000013234	ncl	62	40.633	Amphilophus_citrinellus
ENSXCOG00000007369	-	93	52.346	ENSAOCG00000014792	-	63	51.990	Amphiprion_ocellaris
ENSXCOG00000007369	-	89	41.316	ENSAOCG00000003133	ncl	53	40.979	Amphiprion_ocellaris
ENSXCOG00000007369	-	93	52.346	ENSAPEG00000013612	-	63	52.346	Amphiprion_percula
ENSXCOG00000007369	-	89	41.316	ENSAPEG00000002769	ncl	53	40.979	Amphiprion_percula
ENSXCOG00000007369	-	92	53.598	ENSATEG00000019862	-	82	53.598	Anabas_testudineus
ENSXCOG00000007369	-	89	42.105	ENSATEG00000013343	ncl	54	42.308	Anabas_testudineus
ENSXCOG00000007369	-	91	36.104	ENSAPLG00000012897	-	62	36.104	Anas_platyrhynchos
ENSXCOG00000007369	-	91	34.783	ENSACAG00000001006	-	54	34.158	Anolis_carolinensis
ENSXCOG00000007369	-	74	39.172	ENSACLG00000026031	ncl	89	37.758	Astatotilapia_calliptera
ENSXCOG00000007369	-	91	40.065	ENSAMXG00000001647	ncl	89	37.427	Astyanax_mexicanus
ENSXCOG00000007369	-	86	36.757	ENSCPBG00000016444	-	58	35.309	Chrysemys_picta_bellii
ENSXCOG00000007369	-	91	40.155	ENSCSEG00000015089	ncl	58	39.744	Cynoglossus_semilaevis
ENSXCOG00000007369	-	91	38.992	ENSCVAG00000012600	ncl	55	39.211	Cyprinodon_variegatus
ENSXCOG00000007369	-	92	40.470	ENSDARG00000002710	ncl	84	39.763	Danio_rerio
ENSXCOG00000007369	-	84	30.086	ENSDNOG00000031611	-	62	30.226	Dasypus_novemcinctus
ENSXCOG00000007369	-	84	31.579	ENSDNOG00000040257	-	57	31.579	Dasypus_novemcinctus
ENSXCOG00000007369	-	91	34.197	ENSEBUG00000016173	ncl	52	33.014	Eptatretus_burgeri
ENSXCOG00000007369	-	89	45.526	ENSELUG00000022826	-	80	45.526	Esox_lucius
ENSXCOG00000007369	-	90	40.625	ENSELUG00000006033	ncl	56	41.146	Esox_lucius
ENSXCOG00000007369	-	93	36.951	ENSFALG00000007592	-	54	37.113	Ficedula_albicollis
ENSXCOG00000007369	-	89	40.000	ENSFHEG00000018000	ncl	65	39.062	Fundulus_heteroclitus
ENSXCOG00000007369	-	92	38.095	ENSGMOG00000001341	ncl	59	38.095	Gadus_morhua
ENSXCOG00000007369	-	89	36.528	ENSGALG00000032930	NCL	54	36.269	Gallus_gallus
ENSXCOG00000007369	-	89	41.579	ENSGAFG00000015375	ncl	53	40.594	Gambusia_affinis
ENSXCOG00000007369	-	89	39.050	ENSGACG00000008970	ncl	60	39.050	Gasterosteus_aculeatus
ENSXCOG00000007369	-	86	37.027	ENSGAGG00000013330	-	57	36.111	Gopherus_agassizii
ENSXCOG00000007369	-	89	40.053	ENSHBUG00000006869	ncl	53	40.318	Haplochromis_burtoni
ENSXCOG00000007369	-	89	41.207	ENSHCOG00000010234	ncl	52	41.207	Hippocampus_comes
ENSXCOG00000007369	-	89	38.291	ENSIPUG00000024556	ncl	86	37.651	Ictalurus_punctatus
ENSXCOG00000007369	-	89	40.789	ENSKMAG00000008111	ncl	53	40.789	Kryptolebias_marmoratus
ENSXCOG00000007369	-	89	57.031	ENSLBEG00000007915	-	65	57.031	Labrus_bergylta
ENSXCOG00000007369	-	89	41.053	ENSLBEG00000019073	ncl	57	40.513	Labrus_bergylta
ENSXCOG00000007369	-	89	54.839	ENSLBEG00000014278	-	85	53.806	Labrus_bergylta
ENSXCOG00000007369	-	91	41.207	ENSLACG00000009328	ncl	56	41.207	Latimeria_chalumnae
ENSXCOG00000007369	-	94	37.008	ENSLACG00000022167	-	79	37.008	Latimeria_chalumnae
ENSXCOG00000007369	-	86	39.130	ENSLOCG00000004828	ncl	50	38.381	Lepisosteus_oculatus
ENSXCOG00000007369	-	93	53.598	ENSMAMG00000003479	-	72	53.598	Mastacembelus_armatus
ENSXCOG00000007369	-	89	40.053	ENSMZEG00005017438	ncl	53	40.318	Maylandia_zebra
ENSXCOG00000007369	-	91	35.526	ENSMGAG00000008147	-	94	34.217	Meleagris_gallopavo
ENSXCOG00000007369	-	74	39.117	ENSMMOG00000008553	ncl	84	38.226	Mola_mola
ENSXCOG00000007369	-	89	35.602	ENSMODG00000002470	-	53	35.677	Monodelphis_domestica
ENSXCOG00000007369	-	90	37.824	ENSMALG00000014827	ncl	51	39.385	Monopterus_albus
ENSXCOG00000007369	-	69	39.041	ENSNBRG00000000146	-	88	37.864	Neolamprologus_brichardi
ENSXCOG00000007369	-	69	39.041	ENSNBRG00000001232	ncl	84	37.864	Neolamprologus_brichardi
ENSXCOG00000007369	-	86	35.632	ENSMEUG00000012335	-	50	35.511	Notamacropus_eugenii
ENSXCOG00000007369	-	91	46.475	ENSONIG00000010631	-	97	46.475	Oreochromis_niloticus
ENSXCOG00000007369	-	89	40.053	ENSONIG00000012508	ncl	52	40.318	Oreochromis_niloticus
ENSXCOG00000007369	-	90	36.667	ENSOANG00000008732	-	61	36.410	Ornithorhynchus_anatinus
ENSXCOG00000007369	-	87	41.192	ENSORLG00000007055	ncl	50	41.316	Oryzias_latipes
ENSXCOG00000007369	-	93	44.552	ENSORLG00000004645	-	86	46.250	Oryzias_latipes
ENSXCOG00000007369	-	89	41.316	ENSORLG00020017943	ncl	50	41.316	Oryzias_latipes_hni
ENSXCOG00000007369	-	94	43.198	ENSORLG00020003497	-	78	44.828	Oryzias_latipes_hni
ENSXCOG00000007369	-	89	41.470	ENSORLG00015013815	ncl	89	38.138	Oryzias_latipes_hsok
ENSXCOG00000007369	-	93	44.310	ENSORLG00015006613	-	80	46.250	Oryzias_latipes_hsok
ENSXCOG00000007369	-	89	40.526	ENSOMEG00000020786	ncl	50	39.589	Oryzias_melastigma
ENSXCOG00000007369	-	94	42.537	ENSOMEG00000015864	-	86	42.537	Oryzias_melastigma
ENSXCOG00000007369	-	90	41.099	ENSPKIG00000002604	ncl	53	40.992	Paramormyrops_kingsleyae
ENSXCOG00000007369	-	86	35.912	ENSPSIG00000002361	-	54	34.091	Pelodiscus_sinensis
ENSXCOG00000007369	-	91	38.994	ENSPMGG00000004709	ncl	82	38.182	Periophthalmus_magnuspinnatus
ENSXCOG00000007369	-	89	40.789	ENSPFOG00000024205	ncl	54	39.753	Poecilia_formosa
ENSXCOG00000007369	-	89	41.053	ENSPLAG00000024026	ncl	50	41.316	Poecilia_latipinna
ENSXCOG00000007369	-	89	40.789	ENSPMEG00000006000	ncl	54	39.753	Poecilia_mexicana
ENSXCOG00000007369	-	89	40.053	ENSPNYG00000020494	ncl	53	40.318	Pundamilia_nyererei
ENSXCOG00000007369	-	89	41.053	ENSPNAG00000006192	ncl	52	40.253	Pygocentrus_nattereri
ENSXCOG00000007369	-	89	34.203	ENSSHAG00000002702	-	54	34.582	Sarcophilus_harrisii
ENSXCOG00000007369	-	96	41.885	ENSSFOG00015008583	ncl	59	41.282	Scleropages_formosus
ENSXCOG00000007369	-	73	34.405	ENSSFOG00015013153	-	75	34.405	Scleropages_formosus
ENSXCOG00000007369	-	89	40.526	ENSSMAG00000021241	ncl	53	40.314	Scophthalmus_maximus
ENSXCOG00000007369	-	92	54.000	ENSSMAG00000007582	-	67	52.941	Scophthalmus_maximus
ENSXCOG00000007369	-	89	41.579	ENSSDUG00000006128	ncl	85	41.361	Seriola_dumerili
ENSXCOG00000007369	-	92	55.250	ENSSDUG00000010922	-	76	53.828	Seriola_dumerili
ENSXCOG00000007369	-	89	41.316	ENSSLDG00000002012	ncl	54	40.979	Seriola_lalandi_dorsalis
ENSXCOG00000007369	-	93	54.726	ENSSLDG00000015784	-	70	53.333	Seriola_lalandi_dorsalis
ENSXCOG00000007369	-	90	34.491	ENSSPUG00000008244	-	61	33.738	Sphenodon_punctatus
ENSXCOG00000007369	-	64	42.804	ENSSPAG00000002637	ncl	86	38.994	Stegastes_partitus
ENSXCOG00000007369	-	94	51.621	ENSSPAG00000001859	-	64	51.621	Stegastes_partitus
ENSXCOG00000007369	-	89	36.554	ENSTGUG00000009782	-	60	38.342	Taeniopygia_guttata
ENSXCOG00000007369	-	87	39.084	ENSTRUG00000008185	ncl	55	39.791	Takifugu_rubripes
ENSXCOG00000007369	-	86	39.024	ENSTNIG00000012186	ncl	61	39.474	Tetraodon_nigroviridis
ENSXCOG00000007369	-	86	36.856	ENSXETG00000009517	ncl	51	37.398	Xenopus_tropicalis
ENSXCOG00000007369	-	89	42.105	ENSXMAG00000005914	ncl	54	40.842	Xiphophorus_maculatus