EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000007372 (Gene tree)
Gene ID: -
Gene Symbol: trmt1l
Alias: im:7142104|si:dkeyp-11g8.5
Full Name: tRNA methyltransferase 1-like
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 15318 bases
Position: chrKQ557224.1:25915950-25931267
Accession: ZDB-GENE-041014-189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000009691	TRM	PF02005.16	4.3e-68	1	2
ENSXCOP00000009691	TRM	PF02005.16	4.3e-68	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000009805	-	1842	-	ENSXCOP00000009691	613 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000007372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000007372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000007372	trmt1l	91	62.203	ENSG00000121486	TRMT1L	96	70.098	Homo_sapiens
ENSXCOG00000007372	trmt1l	92	83.793	ENSAPOG00000011807	trmt1l	88	83.793	Acanthochromis_polyacanthus
ENSXCOG00000007372	trmt1l	92	61.745	ENSAMEG00000013538	TRMT1L	81	61.913	Ailuropoda_melanoleuca
ENSXCOG00000007372	trmt1l	73	86.444	ENSACIG00000012049	trmt1l	91	86.444	Amphilophus_citrinellus
ENSXCOG00000007372	trmt1l	93	82.203	ENSAOCG00000018112	trmt1l	94	82.203	Amphiprion_ocellaris
ENSXCOG00000007372	trmt1l	91	81.176	ENSAPEG00000021433	trmt1l	95	81.176	Amphiprion_percula
ENSXCOG00000007372	trmt1l	91	84.068	ENSATEG00000004573	trmt1l	97	84.068	Anabas_testudineus
ENSXCOG00000007372	trmt1l	91	63.652	ENSAPLG00000008394	TRMT1L	83	63.652	Anas_platyrhynchos
ENSXCOG00000007372	trmt1l	92	61.486	ENSACAG00000002342	TRMT1L	82	61.486	Anolis_carolinensis
ENSXCOG00000007372	trmt1l	92	61.809	ENSANAG00000038162	TRMT1L	81	62.248	Aotus_nancymaae
ENSXCOG00000007372	trmt1l	92	81.500	ENSACLG00000021625	trmt1l	89	81.500	Astatotilapia_calliptera
ENSXCOG00000007372	trmt1l	91	75.920	ENSAMXG00000009602	trmt1l	85	75.920	Astyanax_mexicanus
ENSXCOG00000007372	trmt1l	92	61.785	ENSBTAG00000011285	TRMT1L	80	61.785	Bos_taurus
ENSXCOG00000007372	trmt1l	90	62.779	ENSCJAG00000005456	TRMT1L	81	62.606	Callithrix_jacchus
ENSXCOG00000007372	trmt1l	92	62.081	ENSCAFG00000013518	TRMT1L	79	62.081	Canis_familiaris
ENSXCOG00000007372	trmt1l	92	62.081	ENSCAFG00020015640	TRMT1L	81	62.081	Canis_lupus_dingo
ENSXCOG00000007372	trmt1l	92	61.409	ENSCHIG00000016522	TRMT1L	81	61.745	Capra_hircus
ENSXCOG00000007372	trmt1l	92	62.081	ENSTSYG00000010465	TRMT1L	82	62.081	Carlito_syrichta
ENSXCOG00000007372	trmt1l	70	59.184	ENSCAPG00000012562	TRMT1L	77	59.592	Cavia_aperea
ENSXCOG00000007372	trmt1l	91	61.735	ENSCPOG00000001567	TRMT1L	81	61.905	Cavia_porcellus
ENSXCOG00000007372	trmt1l	92	61.307	ENSCCAG00000018699	TRMT1L	81	61.577	Cebus_capucinus
ENSXCOG00000007372	trmt1l	93	61.983	ENSCATG00000043114	TRMT1L	82	61.983	Cercocebus_atys
ENSXCOG00000007372	trmt1l	90	47.432	ENSCLAG00000010853	-	81	46.623	Chinchilla_lanigera
ENSXCOG00000007372	trmt1l	92	62.353	ENSCLAG00000010801	-	83	61.983	Chinchilla_lanigera
ENSXCOG00000007372	trmt1l	93	61.983	ENSCSAG00000012880	TRMT1L	82	61.983	Chlorocebus_sabaeus
ENSXCOG00000007372	trmt1l	55	67.623	ENSCHOG00000011164	TRMT1L	56	67.623	Choloepus_hoffmanni
ENSXCOG00000007372	trmt1l	91	65.136	ENSCPBG00000015694	TRMT1L	83	65.136	Chrysemys_picta_bellii
ENSXCOG00000007372	trmt1l	93	62.252	ENSCANG00000031107	TRMT1L	81	62.252	Colobus_angolensis_palliatus
ENSXCOG00000007372	trmt1l	92	61.486	ENSCGRG00001019297	Trmt1l	81	61.486	Cricetulus_griseus_chok1gshd
ENSXCOG00000007372	trmt1l	92	61.486	ENSCGRG00000005036	Trmt1l	81	61.486	Cricetulus_griseus_crigri
ENSXCOG00000007372	trmt1l	94	78.798	ENSCSEG00000001248	trmt1l	92	78.798	Cynoglossus_semilaevis
ENSXCOG00000007372	trmt1l	91	85.893	ENSCVAG00000012274	trmt1l	89	85.893	Cyprinodon_variegatus
ENSXCOG00000007372	trmt1l	90	76.142	ENSDARG00000042057	trmt1l	91	76.142	Danio_rerio
ENSXCOG00000007372	trmt1l	92	61.409	ENSDNOG00000005239	TRMT1L	81	61.745	Dasypus_novemcinctus
ENSXCOG00000007372	trmt1l	91	57.240	ENSDORG00000003298	Trmt1l	89	57.240	Dipodomys_ordii
ENSXCOG00000007372	trmt1l	73	66.803	ENSETEG00000015895	TRMT1L	60	66.803	Echinops_telfairi
ENSXCOG00000007372	trmt1l	93	48.427	ENSEBUG00000010301	trmt1l	91	48.427	Eptatretus_burgeri
ENSXCOG00000007372	trmt1l	93	60.622	ENSEASG00005005551	TRMT1L	81	60.068	Equus_asinus_asinus
ENSXCOG00000007372	trmt1l	93	61.102	ENSECAG00000020999	TRMT1L	76	61.102	Equus_caballus
ENSXCOG00000007372	trmt1l	86	61.466	ENSEEUG00000014110	TRMT1L	78	61.466	Erinaceus_europaeus
ENSXCOG00000007372	trmt1l	91	75.793	ENSELUG00000020587	trmt1l	86	76.127	Esox_lucius
ENSXCOG00000007372	trmt1l	92	61.849	ENSFCAG00000011285	TRMT1L	82	61.849	Felis_catus
ENSXCOG00000007372	trmt1l	91	63.481	ENSFALG00000003177	TRMT1L	90	63.481	Ficedula_albicollis
ENSXCOG00000007372	trmt1l	94	60.561	ENSFDAG00000008822	TRMT1L	84	60.661	Fukomys_damarensis
ENSXCOG00000007372	trmt1l	80	84.440	ENSFHEG00000014328	trmt1l	99	84.440	Fundulus_heteroclitus
ENSXCOG00000007372	trmt1l	91	78.893	ENSGMOG00000009535	trmt1l	94	78.893	Gadus_morhua
ENSXCOG00000007372	trmt1l	91	63.435	ENSGALG00000033077	TRMT1L	77	63.435	Gallus_gallus
ENSXCOG00000007372	trmt1l	92	91.820	ENSGAFG00000012445	trmt1l	89	91.820	Gambusia_affinis
ENSXCOG00000007372	trmt1l	92	81.697	ENSGACG00000005050	trmt1l	99	81.769	Gasterosteus_aculeatus
ENSXCOG00000007372	trmt1l	91	65.816	ENSGAGG00000007441	TRMT1L	77	65.816	Gopherus_agassizii
ENSXCOG00000007372	trmt1l	91	62.203	ENSGGOG00000011778	TRMT1L	80	62.373	Gorilla_gorilla
ENSXCOG00000007372	trmt1l	92	82.161	ENSHBUG00000000622	trmt1l	97	82.161	Haplochromis_burtoni
ENSXCOG00000007372	trmt1l	86	52.143	ENSHGLG00000012595	-	84	52.143	Heterocephalus_glaber_female
ENSXCOG00000007372	trmt1l	85	61.455	ENSHGLG00000003135	-	80	61.455	Heterocephalus_glaber_female
ENSXCOG00000007372	trmt1l	86	52.143	ENSHGLG00100004569	-	84	52.143	Heterocephalus_glaber_male
ENSXCOG00000007372	trmt1l	92	61.913	ENSHGLG00100019412	-	82	61.913	Heterocephalus_glaber_male
ENSXCOG00000007372	trmt1l	90	73.196	ENSIPUG00000008873	trmt1l	92	72.680	Ictalurus_punctatus
ENSXCOG00000007372	trmt1l	92	61.513	ENSSTOG00000010332	TRMT1L	82	61.513	Ictidomys_tridecemlineatus
ENSXCOG00000007372	trmt1l	91	61.158	ENSJJAG00000010929	Trmt1l	83	61.158	Jaculus_jaculus
ENSXCOG00000007372	trmt1l	91	86.949	ENSKMAG00000010310	trmt1l	87	88.007	Kryptolebias_marmoratus
ENSXCOG00000007372	trmt1l	91	83.788	ENSLBEG00000003487	trmt1l	87	84.130	Labrus_bergylta
ENSXCOG00000007372	trmt1l	82	83.396	ENSLBEG00000007982	-	87	83.769	Labrus_bergylta
ENSXCOG00000007372	trmt1l	92	65.167	ENSLACG00000008447	TRMT1L	88	65.282	Latimeria_chalumnae
ENSXCOG00000007372	trmt1l	90	75.421	ENSLOCG00000001781	trmt1l	85	75.421	Lepisosteus_oculatus
ENSXCOG00000007372	trmt1l	92	61.809	ENSLAFG00000004339	TRMT1L	82	61.977	Loxodonta_africana
ENSXCOG00000007372	trmt1l	93	61.983	ENSMFAG00000037592	TRMT1L	82	61.983	Macaca_fascicularis
ENSXCOG00000007372	trmt1l	93	61.983	ENSMMUG00000013879	TRMT1L	86	61.983	Macaca_mulatta
ENSXCOG00000007372	trmt1l	93	61.983	ENSMNEG00000041637	TRMT1L	82	61.983	Macaca_nemestrina
ENSXCOG00000007372	trmt1l	93	61.983	ENSMLEG00000004840	TRMT1L	82	61.983	Mandrillus_leucophaeus
ENSXCOG00000007372	trmt1l	91	84.764	ENSMAMG00000015305	trmt1l	94	84.615	Mastacembelus_armatus
ENSXCOG00000007372	trmt1l	92	81.667	ENSMZEG00005017822	trmt1l	89	81.667	Maylandia_zebra
ENSXCOG00000007372	trmt1l	91	63.051	ENSMGAG00000000930	TRMT1L	90	63.051	Meleagris_gallopavo
ENSXCOG00000007372	trmt1l	90	59.492	ENSMAUG00000019870	Trmt1l	81	59.492	Mesocricetus_auratus
ENSXCOG00000007372	trmt1l	92	61.667	ENSMICG00000009494	TRMT1L	80	62.712	Microcebus_murinus
ENSXCOG00000007372	trmt1l	92	61.486	ENSMOCG00000016453	Trmt1l	81	61.486	Microtus_ochrogaster
ENSXCOG00000007372	trmt1l	89	81.034	ENSMMOG00000016961	trmt1l	94	80.517	Mola_mola
ENSXCOG00000007372	trmt1l	98	61.669	ENSMODG00000007454	TRMT1L	75	61.669	Monodelphis_domestica
ENSXCOG00000007372	trmt1l	92	81.697	ENSMALG00000019306	trmt1l	88	81.697	Monopterus_albus
ENSXCOG00000007372	trmt1l	91	61.329	MGP_CAROLIEiJ_G0014693	Trmt1l	81	61.083	Mus_caroli
ENSXCOG00000007372	trmt1l	91	61.499	ENSMUSG00000053286	Trmt1l	80	61.499	Mus_musculus
ENSXCOG00000007372	trmt1l	91	61.670	MGP_PahariEiJ_G0027929	Trmt1l	80	61.670	Mus_pahari
ENSXCOG00000007372	trmt1l	80	69.072	MGP_SPRETEiJ_G0015500	Trmt1l	79	69.072	Mus_spretus
ENSXCOG00000007372	trmt1l	91	57.288	ENSMPUG00000011859	TRMT1L	81	58.644	Mustela_putorius_furo
ENSXCOG00000007372	trmt1l	91	62.479	ENSMLUG00000001136	TRMT1L	82	62.585	Myotis_lucifugus
ENSXCOG00000007372	trmt1l	91	61.224	ENSNGAG00000011685	Trmt1l	81	61.224	Nannospalax_galili
ENSXCOG00000007372	trmt1l	74	84.513	ENSNBRG00000004053	trmt1l	88	80.000	Neolamprologus_brichardi
ENSXCOG00000007372	trmt1l	91	62.712	ENSNLEG00000018030	TRMT1L	80	62.881	Nomascus_leucogenys
ENSXCOG00000007372	trmt1l	77	67.010	ENSMEUG00000011344	TRMT1L	68	72.727	Notamacropus_eugenii
ENSXCOG00000007372	trmt1l	88	59.859	ENSOPRG00000000680	TRMT1L	86	59.859	Ochotona_princeps
ENSXCOG00000007372	trmt1l	93	59.432	ENSODEG00000000826	TRMT1L	83	59.432	Octodon_degus
ENSXCOG00000007372	trmt1l	92	82.580	ENSONIG00000007823	trmt1l	96	81.469	Oreochromis_niloticus
ENSXCOG00000007372	trmt1l	93	62.748	ENSOANG00000001010	TRMT1L	92	62.748	Ornithorhynchus_anatinus
ENSXCOG00000007372	trmt1l	92	61.642	ENSOCUG00000004896	TRMT1L	83	62.081	Oryctolagus_cuniculus
ENSXCOG00000007372	trmt1l	89	82.788	ENSORLG00000029610	trmt1l	96	82.343	Oryzias_latipes
ENSXCOG00000007372	trmt1l	89	82.960	ENSORLG00020002203	trmt1l	87	82.513	Oryzias_latipes_hni
ENSXCOG00000007372	trmt1l	89	82.272	ENSORLG00015021512	trmt1l	87	81.834	Oryzias_latipes_hsok
ENSXCOG00000007372	trmt1l	84	100.000	ENSOMEG00000016275	trmt1l	83	100.000	Oryzias_melastigma
ENSXCOG00000007372	trmt1l	91	57.118	ENSOGAG00000016186	TRMT1L	93	57.118	Otolemur_garnettii
ENSXCOG00000007372	trmt1l	92	61.409	ENSOARG00000003786	TRMT1L	81	61.745	Ovis_aries
ENSXCOG00000007372	trmt1l	91	62.373	ENSPPAG00000029141	TRMT1L	80	62.712	Pan_paniscus
ENSXCOG00000007372	trmt1l	92	61.849	ENSPPRG00000023981	TRMT1L	82	61.849	Panthera_pardus
ENSXCOG00000007372	trmt1l	92	61.849	ENSPTIG00000021754	TRMT1L	82	61.849	Panthera_tigris_altaica
ENSXCOG00000007372	trmt1l	91	62.373	ENSPTRG00000001776	TRMT1L	80	62.712	Pan_troglodytes
ENSXCOG00000007372	trmt1l	93	60.331	ENSPANG00000020890	TRMT1L	82	60.331	Papio_anubis
ENSXCOG00000007372	trmt1l	90	76.263	ENSPKIG00000005941	trmt1l	85	76.263	Paramormyrops_kingsleyae
ENSXCOG00000007372	trmt1l	95	63.502	ENSPSIG00000010011	TRMT1L	91	62.419	Pelodiscus_sinensis
ENSXCOG00000007372	trmt1l	84	72.676	ENSPMGG00000021359	trmt1l	95	73.245	Periophthalmus_magnuspinnatus
ENSXCOG00000007372	trmt1l	92	60.469	ENSPEMG00000000031	Trmt1l	82	60.469	Peromyscus_maniculatus_bairdii
ENSXCOG00000007372	trmt1l	90	58.333	ENSPMAG00000005838	trmt1l	94	58.404	Petromyzon_marinus
ENSXCOG00000007372	trmt1l	95	64.901	ENSPCIG00000002409	TRMT1L	82	65.604	Phascolarctos_cinereus
ENSXCOG00000007372	trmt1l	95	88.599	ENSPFOG00000003872	trmt1l	96	88.599	Poecilia_formosa
ENSXCOG00000007372	trmt1l	92	90.033	ENSPLAG00000010387	trmt1l	89	90.033	Poecilia_latipinna
ENSXCOG00000007372	trmt1l	92	90.033	ENSPMEG00000011828	trmt1l	99	90.033	Poecilia_mexicana
ENSXCOG00000007372	trmt1l	92	89.369	ENSPREG00000002866	trmt1l	89	89.369	Poecilia_reticulata
ENSXCOG00000007372	trmt1l	91	62.542	ENSPPYG00000000416	TRMT1L	80	62.712	Pongo_abelii
ENSXCOG00000007372	trmt1l	83	67.708	ENSPCAG00000008257	TRMT1L	69	67.708	Procavia_capensis
ENSXCOG00000007372	trmt1l	76	59.211	ENSPCOG00000005682	TRMT1L	78	46.154	Propithecus_coquereli
ENSXCOG00000007372	trmt1l	80	68.657	ENSPVAG00000005961	TRMT1L	70	68.657	Pteropus_vampyrus
ENSXCOG00000007372	trmt1l	92	81.990	ENSPNYG00000005607	trmt1l	97	81.990	Pundamilia_nyererei
ENSXCOG00000007372	trmt1l	91	74.749	ENSPNAG00000004389	trmt1l	85	74.749	Pygocentrus_nattereri
ENSXCOG00000007372	trmt1l	91	62.010	ENSRNOG00000002580	Trmt1l	81	62.010	Rattus_norvegicus
ENSXCOG00000007372	trmt1l	93	62.086	ENSRBIG00000042589	TRMT1L	81	62.086	Rhinopithecus_bieti
ENSXCOG00000007372	trmt1l	93	62.086	ENSRROG00000032183	TRMT1L	81	62.086	Rhinopithecus_roxellana
ENSXCOG00000007372	trmt1l	95	60.714	ENSSBOG00000029282	TRMT1L	83	61.039	Saimiri_boliviensis_boliviensis
ENSXCOG00000007372	trmt1l	93	75.369	ENSSFOG00015004878	trmt1l	88	75.369	Scleropages_formosus
ENSXCOG00000007372	trmt1l	67	82.803	ENSSMAG00000015425	trmt1l	93	83.019	Scophthalmus_maximus
ENSXCOG00000007372	trmt1l	90	85.274	ENSSDUG00000021807	trmt1l	96	85.274	Seriola_dumerili
ENSXCOG00000007372	trmt1l	90	84.932	ENSSLDG00000016579	trmt1l	96	84.932	Seriola_lalandi_dorsalis
ENSXCOG00000007372	trmt1l	70	60.584	ENSSARG00000010135	TRMT1L	82	60.584	Sorex_araneus
ENSXCOG00000007372	trmt1l	91	64.786	ENSSPUG00000003927	TRMT1L	96	64.786	Sphenodon_punctatus
ENSXCOG00000007372	trmt1l	91	83.108	ENSSPAG00000008597	trmt1l	87	82.689	Stegastes_partitus
ENSXCOG00000007372	trmt1l	92	63.855	ENSSSCG00000021393	TRMT1L	77	63.855	Sus_scrofa
ENSXCOG00000007372	trmt1l	91	63.993	ENSTGUG00000003737	TRMT1L	87	63.993	Taeniopygia_guttata
ENSXCOG00000007372	trmt1l	92	76.094	ENSTRUG00000002396	trmt1l	96	72.968	Takifugu_rubripes
ENSXCOG00000007372	trmt1l	65	78.282	ENSTNIG00000005534	trmt1l	99	78.282	Tetraodon_nigroviridis
ENSXCOG00000007372	trmt1l	77	59.819	ENSTBEG00000016498	TRMT1L	69	60.000	Tupaia_belangeri
ENSXCOG00000007372	trmt1l	92	59.564	ENSTTRG00000005892	TRMT1L	81	59.564	Tursiops_truncatus
ENSXCOG00000007372	trmt1l	92	61.745	ENSUAMG00000020936	TRMT1L	81	61.913	Ursus_americanus
ENSXCOG00000007372	trmt1l	92	61.745	ENSUMAG00000021919	TRMT1L	80	61.913	Ursus_maritimus
ENSXCOG00000007372	trmt1l	92	61.913	ENSVPAG00000011854	TRMT1L	91	61.913	Vicugna_pacos
ENSXCOG00000007372	trmt1l	92	62.081	ENSVVUG00000009166	TRMT1L	81	62.081	Vulpes_vulpes
ENSXCOG00000007372	trmt1l	78	58.471	ENSXETG00000004539	trmt1l	93	58.471	Xenopus_tropicalis
ENSXCOG00000007372	trmt1l	94	93.898	ENSXMAG00000003575	trmt1l	99	93.898	Xiphophorus_maculatus