EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSXCOG00000007398 (Gene tree)
Gene ID
-
Gene Symbol
apobec2b
Alias
apo2b
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide-like 2b
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
3634 bases
Position
chrKQ557201.1:14410648-14414281
Accession
ZDB-GENE-090618-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000009729APOBEC_NPF08210.112.8e-4411
ENSXCOP00000009727APOBEC_NPF08210.113.4e-4411
ENSXCOP00000009729APOBEC_CPF05240.145.5e-2611
ENSXCOP00000009727APOBEC_CPF05240.146.2e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000009843-759-ENSXCOP00000009729252 (aa)--
ENSXCOT00000009841-813-ENSXCOP00000009727270 (aa)--
Gene Model
Click here to download ENSXCOG00000007398's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000007398's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000007398apobec2b7362.304ENSG00000124701APOBEC28562.304Homo_sapiens
ENSXCOG00000007398apobec2b10076.838ENSAPOG00000019390apobec2b10076.471Acanthochromis_polyacanthus
ENSXCOG00000007398apobec2b8450.228ENSAMEG00000004467APOBEC27157.222Ailuropoda_melanoleuca
ENSXCOG00000007398apobec2b7355.914ENSACIG00000016370apobec2a7654.359Amphilophus_citrinellus
ENSXCOG00000007398apobec2b10076.838ENSACIG00000002472APOBEC210075.000Amphilophus_citrinellus
ENSXCOG00000007398apobec2b10052.344ENSAOCG00000003291apobec2a10050.385Amphiprion_ocellaris
ENSXCOG00000007398apobec2b10077.574ENSAOCG00000023355apobec2b10077.206Amphiprion_ocellaris
ENSXCOG00000007398apobec2b10077.206ENSAPEG00000004591apobec2b10077.206Amphiprion_percula
ENSXCOG00000007398apobec2b9952.157ENSAPEG00000003630apobec2a10051.351Amphiprion_percula
ENSXCOG00000007398apobec2b10051.562ENSATEG00000000956apobec2a9857.714Anabas_testudineus
ENSXCOG00000007398apobec2b10075.092ENSATEG00000023043APOBEC210076.923Anabas_testudineus
ENSXCOG00000007398apobec2b8751.037ENSAPLG00000002895APOBEC28359.043Anas_platyrhynchos
ENSXCOG00000007398apobec2b8850.000ENSACAG00000016506APOBEC29556.742Anolis_carolinensis
ENSXCOG00000007398apobec2b7362.304ENSANAG00000026993APOBEC28562.304Aotus_nancymaae
ENSXCOG00000007398apobec2b6857.558ENSACLG00000026736-9757.558Astatotilapia_calliptera
ENSXCOG00000007398apobec2b10076.471ENSACLG00000007634APOBEC210075.368Astatotilapia_calliptera
ENSXCOG00000007398apobec2b8454.839ENSAMXG00000042992apobec2a9653.516Astyanax_mexicanus
ENSXCOG00000007398apobec2b8859.825ENSAMXG00000015966apobec2b8756.452Astyanax_mexicanus
ENSXCOG00000007398apobec2b7759.406ENSBTAG00000005974APOBEC26559.406Bos_taurus
ENSXCOG00000007398apobec2b7760.891ENSCJAG00000004063APOBEC29060.891Callithrix_jacchus
ENSXCOG00000007398apobec2b7360.733ENSCAFG00000001575APOBEC28560.733Canis_familiaris
ENSXCOG00000007398apobec2b7360.733ENSCAFG00020008306APOBEC28560.733Canis_lupus_dingo
ENSXCOG00000007398apobec2b7858.333ENSCHIG00000026348APOBEC29058.416Capra_hircus
ENSXCOG00000007398apobec2b7361.257ENSTSYG00000008206APOBEC210053.361Carlito_syrichta
ENSXCOG00000007398apobec2b7360.209ENSCAPG00000015084APOBEC28460.209Cavia_aperea
ENSXCOG00000007398apobec2b7360.209ENSCPOG00000036103APOBEC28460.209Cavia_porcellus
ENSXCOG00000007398apobec2b7362.304ENSCCAG00000033987APOBEC28562.304Cebus_capucinus
ENSXCOG00000007398apobec2b7362.827ENSCATG00000010691APOBEC28562.827Cercocebus_atys
ENSXCOG00000007398apobec2b7360.733ENSCLAG00000013817APOBEC28460.733Chinchilla_lanigera
ENSXCOG00000007398apobec2b7362.827ENSCSAG00000011177APOBEC28562.827Chlorocebus_sabaeus
ENSXCOG00000007398apobec2b6960.000ENSCHOG00000008930APOBEC210060.000Choloepus_hoffmanni
ENSXCOG00000007398apobec2b7158.378ENSCPBG00000017469APOBEC28558.602Chrysemys_picta_bellii
ENSXCOG00000007398apobec2b7362.827ENSCANG00000035072APOBEC28562.827Colobus_angolensis_palliatus
ENSXCOG00000007398apobec2b8056.744ENSCGRG00001014983Apobec29059.406Cricetulus_griseus_chok1gshd
ENSXCOG00000007398apobec2b8056.744ENSCGRG00000007835Apobec29059.406Cricetulus_griseus_crigri
ENSXCOG00000007398apobec2b10052.692ENSCSEG00000020201apobec2a10050.781Cynoglossus_semilaevis
ENSXCOG00000007398apobec2b7574.468ENSCSEG00000000690-7374.227Cynoglossus_semilaevis
ENSXCOG00000007398apobec2b10087.407ENSCVAG00000012342apobec2b10087.037Cyprinodon_variegatus
ENSXCOG00000007398apobec2b9059.914ENSDARG00000113992apobec2b8560.593Danio_rerio
ENSXCOG00000007398apobec2b10054.615ENSDARG00000018881apobec2a9454.373Danio_rerio
ENSXCOG00000007398apobec2b7342.564ENSDNOG00000033914APOBEC29043.396Dasypus_novemcinctus
ENSXCOG00000007398apobec2b7358.639ENSDORG00000006447Apobec28358.639Dipodomys_ordii
ENSXCOG00000007398apobec2b7359.162ENSETEG00000000624APOBEC28359.162Echinops_telfairi
ENSXCOG00000007398apobec2b6854.645ENSEASG00005002937APOBEC28359.748Equus_asinus_asinus
ENSXCOG00000007398apobec2b8056.744ENSECAG00000006576APOBEC28561.257Equus_caballus
ENSXCOG00000007398apobec2b7759.606ENSEEUG00000006046APOBEC29159.606Erinaceus_europaeus
ENSXCOG00000007398apobec2b9950.000ENSELUG00000003736apobec2a6959.694Esox_lucius
ENSXCOG00000007398apobec2b7360.209ENSFCAG00000004108APOBEC28560.209Felis_catus
ENSXCOG00000007398apobec2b7249.468ENSFALG00000003910APOBEC29047.783Ficedula_albicollis
ENSXCOG00000007398apobec2b7360.209ENSFDAG00000006015APOBEC28560.209Fukomys_damarensis
ENSXCOG00000007398apobec2b10082.540ENSFHEG00000005492apobec2b10083.333Fundulus_heteroclitus
ENSXCOG00000007398apobec2b6960.227ENSGMOG00000007028apobec2a10060.227Gadus_morhua
ENSXCOG00000007398apobec2b8073.529ENSGMOG00000006819apobec2b10064.173Gadus_morhua
ENSXCOG00000007398apobec2b7357.672ENSGALG00000003226APOBEC28557.672Gallus_gallus
ENSXCOG00000007398apobec2b10095.926ENSGAFG00000007634apobec2b8795.926Gambusia_affinis
ENSXCOG00000007398apobec2b10073.810ENSGACG00000009663apobec2b9580.645Gasterosteus_aculeatus
ENSXCOG00000007398apobec2b7460.106ENSGACG00000011671apobec2a10060.106Gasterosteus_aculeatus
ENSXCOG00000007398apobec2b7158.378ENSGAGG00000010347APOBEC29156.716Gopherus_agassizii
ENSXCOG00000007398apobec2b7362.304ENSGGOG00000001099APOBEC28362.304Gorilla_gorilla
ENSXCOG00000007398apobec2b10075.000ENSHBUG00000005993apobec2b10073.897Haplochromis_burtoni
ENSXCOG00000007398apobec2b9454.098ENSHBUG00000015890apobec2a7761.458Haplochromis_burtoni
ENSXCOG00000007398apobec2b7359.162ENSHGLG00000017169APOBEC28459.162Heterocephalus_glaber_female
ENSXCOG00000007398apobec2b7359.162ENSHGLG00100019442APOBEC28459.162Heterocephalus_glaber_male
ENSXCOG00000007398apobec2b9649.388ENSHCOG00000020319apobec2a8057.360Hippocampus_comes
ENSXCOG00000007398apobec2b10073.162ENSHCOG00000002712APOBEC210071.324Hippocampus_comes
ENSXCOG00000007398apobec2b10051.724ENSIPUG00000017355apobec2a7151.938Ictalurus_punctatus
ENSXCOG00000007398apobec2b10057.664ENSIPUG00000013784Apobec210057.664Ictalurus_punctatus
ENSXCOG00000007398apobec2b7360.733ENSSTOG00000023643APOBEC28560.733Ictidomys_tridecemlineatus
ENSXCOG00000007398apobec2b7757.921ENSJJAG00000009733Apobec29057.921Jaculus_jaculus
ENSXCOG00000007398apobec2b9978.067ENSKMAG00000020631apobec2b9976.952Kryptolebias_marmoratus
ENSXCOG00000007398apobec2b10050.000ENSLBEG00000025214apobec2a10050.000Labrus_bergylta
ENSXCOG00000007398apobec2b10070.000ENSLBEG00000009422-10071.378Labrus_bergylta
ENSXCOG00000007398apobec2b8558.009ENSLACG00000015985APOBEC29658.009Latimeria_chalumnae
ENSXCOG00000007398apobec2b7762.814ENSLOCG00000012415apobec2b9950.357Lepisosteus_oculatus
ENSXCOG00000007398apobec2b7859.314ENSLAFG00000016563APOBEC29059.406Loxodonta_africana
ENSXCOG00000007398apobec2b7362.827ENSMFAG00000044645APOBEC28562.827Macaca_fascicularis
ENSXCOG00000007398apobec2b7362.827ENSMMUG00000021171APOBEC28562.827Macaca_mulatta
ENSXCOG00000007398apobec2b7362.827ENSMNEG00000045497APOBEC28562.827Macaca_nemestrina
ENSXCOG00000007398apobec2b7362.827ENSMLEG00000028328APOBEC28562.827Mandrillus_leucophaeus
ENSXCOG00000007398apobec2b9853.725ENSMAMG00000023685apobec2a9652.344Mastacembelus_armatus
ENSXCOG00000007398apobec2b10073.477ENSMAMG00000007926APOBEC210072.826Mastacembelus_armatus
ENSXCOG00000007398apobec2b8956.522ENSMZEG00005005240-9059.195Maylandia_zebra
ENSXCOG00000007398apobec2b10076.471ENSMZEG00005027159APOBEC210075.368Maylandia_zebra
ENSXCOG00000007398apobec2b8951.082ENSMGAG00000010173APOBEC29455.866Meleagris_gallopavo
ENSXCOG00000007398apobec2b8356.502ENSMAUG00000011016Apobec29059.901Mesocricetus_auratus
ENSXCOG00000007398apobec2b8057.407ENSMICG00000043339APOBEC28561.257Microcebus_murinus
ENSXCOG00000007398apobec2b7760.396ENSMOCG00000001904Apobec29060.396Microtus_ochrogaster
ENSXCOG00000007398apobec2b10073.333ENSMMOG00000008681apobec2b10073.333Mola_mola
ENSXCOG00000007398apobec2b8355.093ENSMODG00000013090APOBEC28659.474Monodelphis_domestica
ENSXCOG00000007398apobec2b10071.481ENSMALG00000013779APOBEC210071.852Monopterus_albus
ENSXCOG00000007398apobec2b10050.781ENSMALG00000020523apobec2a10051.575Monopterus_albus
ENSXCOG00000007398apobec2b7759.901MGP_CAROLIEiJ_G0021727Apobec29059.901Mus_caroli
ENSXCOG00000007398apobec2b7759.901ENSMUSG00000040694Apobec29059.901Mus_musculus
ENSXCOG00000007398apobec2b7759.901MGP_PahariEiJ_G0020716Apobec29059.901Mus_pahari
ENSXCOG00000007398apobec2b7361.257ENSMPUG00000013691APOBEC28261.257Mustela_putorius_furo
ENSXCOG00000007398apobec2b7360.733ENSMLUG00000011327APOBEC28360.733Myotis_lucifugus
ENSXCOG00000007398apobec2b7758.911ENSNGAG00000013717Apobec29058.911Nannospalax_galili
ENSXCOG00000007398apobec2b7460.847ENSNBRG00000021776apobec2a7660.847Neolamprologus_brichardi
ENSXCOG00000007398apobec2b10076.838ENSNBRG00000018806apobec2b8975.735Neolamprologus_brichardi
ENSXCOG00000007398apobec2b7362.304ENSNLEG00000005057APOBEC28562.304Nomascus_leucogenys
ENSXCOG00000007398apobec2b8355.556ENSMEUG00000011623APOBEC28660.000Notamacropus_eugenii
ENSXCOG00000007398apobec2b7958.654ENSOPRG00000014808APOBEC28461.780Ochotona_princeps
ENSXCOG00000007398apobec2b7360.733ENSODEG00000016183APOBEC28360.733Octodon_degus
ENSXCOG00000007398apobec2b10077.574ENSONIG00000012289apobec2b10076.471Oreochromis_niloticus
ENSXCOG00000007398apobec2b9953.360ENSONIG00000004644-7861.658Oreochromis_niloticus
ENSXCOG00000007398apobec2b6557.143ENSOANG00000000824APOBEC29955.249Ornithorhynchus_anatinus
ENSXCOG00000007398apobec2b7957.212ENSOCUG00000028008APOBEC28460.209Oryctolagus_cuniculus
ENSXCOG00000007398apobec2b10080.370ENSORLG00000022372APOBEC210080.000Oryzias_latipes
ENSXCOG00000007398apobec2b9055.983ENSORLG00000010752apobec2a9754.310Oryzias_latipes
ENSXCOG00000007398apobec2b9055.983ENSORLG00020004153apobec2a9754.310Oryzias_latipes_hni
ENSXCOG00000007398apobec2b10080.741ENSORLG00020006164APOBEC210080.370Oryzias_latipes_hni
ENSXCOG00000007398apobec2b9055.983ENSORLG00015021781apobec2a9754.310Oryzias_latipes_hsok
ENSXCOG00000007398apobec2b10080.370ENSORLG00015022089-10080.000Oryzias_latipes_hsok
ENSXCOG00000007398apobec2b9054.661ENSOMEG00000001311apobec2a9656.087Oryzias_melastigma
ENSXCOG00000007398apobec2b10081.111ENSOMEG00000015449APOBEC210080.741Oryzias_melastigma
ENSXCOG00000007398apobec2b8057.870ENSOGAG00000002632APOBEC28561.780Otolemur_garnettii
ENSXCOG00000007398apobec2b7858.824ENSOARG00000000820APOBEC29058.911Ovis_aries
ENSXCOG00000007398apobec2b7362.304ENSPPAG00000035598APOBEC28362.304Pan_paniscus
ENSXCOG00000007398apobec2b7360.209ENSPPRG00000008530APOBEC28560.209Panthera_pardus
ENSXCOG00000007398apobec2b7360.209ENSPTIG00000011084APOBEC28560.209Panthera_tigris_altaica
ENSXCOG00000007398apobec2b7362.304ENSPTRG00000029679APOBEC28362.304Pan_troglodytes
ENSXCOG00000007398apobec2b7362.827ENSPANG00000007121APOBEC28562.827Papio_anubis
ENSXCOG00000007398apobec2b9163.291ENSPKIG00000004741apobec2b6871.123Paramormyrops_kingsleyae
ENSXCOG00000007398apobec2b9353.968ENSPKIG00000005395apobec2a8063.265Paramormyrops_kingsleyae
ENSXCOG00000007398apobec2b7158.919ENSPSIG00000013480APOBEC29949.791Pelodiscus_sinensis
ENSXCOG00000007398apobec2b10054.864ENSPMGG00000004044apobec2a9954.475Periophthalmus_magnuspinnatus
ENSXCOG00000007398apobec2b10068.750ENSPMGG00000002686APOBEC28067.279Periophthalmus_magnuspinnatus
ENSXCOG00000007398apobec2b7759.901ENSPEMG00000005724Apobec29059.901Peromyscus_maniculatus_bairdii
ENSXCOG00000007398apobec2b10094.074ENSPFOG00000001216apobec2b10093.704Poecilia_formosa
ENSXCOG00000007398apobec2b10093.704ENSPLAG00000002074apobec2b10093.333Poecilia_latipinna
ENSXCOG00000007398apobec2b10094.444ENSPMEG00000017537apobec2b10094.074Poecilia_mexicana
ENSXCOG00000007398apobec2b10094.444ENSPREG00000020060apobec2b8794.074Poecilia_reticulata
ENSXCOG00000007398apobec2b7361.780ENSPPYG00000016586APOBEC28561.780Pongo_abelii
ENSXCOG00000007398apobec2b7360.209ENSPCAG00000011433APOBEC210060.209Procavia_capensis
ENSXCOG00000007398apobec2b7362.304ENSPCOG00000026935APOBEC28562.304Propithecus_coquereli
ENSXCOG00000007398apobec2b7360.733ENSPVAG00000008316APOBEC28560.733Pteropus_vampyrus
ENSXCOG00000007398apobec2b10076.471ENSPNYG00000016747apobec2b10075.368Pundamilia_nyererei
ENSXCOG00000007398apobec2b8659.910ENSPNAG00000013666apobec2b10054.930Pygocentrus_nattereri
ENSXCOG00000007398apobec2b9855.769ENSPNAG00000010382apobec2a9653.937Pygocentrus_nattereri
ENSXCOG00000007398apobec2b7759.406ENSRNOG00000012303Apobec29059.406Rattus_norvegicus
ENSXCOG00000007398apobec2b7362.827ENSRBIG00000044756APOBEC28562.827Rhinopithecus_bieti
ENSXCOG00000007398apobec2b7362.827ENSRROG00000030082APOBEC28562.827Rhinopithecus_roxellana
ENSXCOG00000007398apobec2b7362.304ENSSBOG00000028496APOBEC210054.202Saimiri_boliviensis_boliviensis
ENSXCOG00000007398apobec2b7957.488ENSSHAG00000017771APOBEC28660.526Sarcophilus_harrisii
ENSXCOG00000007398apobec2b9162.869ENSSFOG00015022920apobec26870.588Scleropages_formosus
ENSXCOG00000007398apobec2b6654.438ENSSFOG00015005437-7154.438Scleropages_formosus
ENSXCOG00000007398apobec2b8978.509ENSSMAG00000005110APOBEC210074.182Scophthalmus_maximus
ENSXCOG00000007398apobec2b10051.373ENSSMAG00000001011apobec2a6654.018Scophthalmus_maximus
ENSXCOG00000007398apobec2b10077.574ENSSDUG00000014543apobec2b10076.471Seriola_dumerili
ENSXCOG00000007398apobec2b10053.125ENSSDUG00000007013apobec2a10052.344Seriola_dumerili
ENSXCOG00000007398apobec2b10077.574ENSSLDG00000003321apobec2b10076.471Seriola_lalandi_dorsalis
ENSXCOG00000007398apobec2b10052.918ENSSLDG00000020199apobec2a10051.562Seriola_lalandi_dorsalis
ENSXCOG00000007398apobec2b6853.333ENSSPUG00000010839APOBEC28754.444Sphenodon_punctatus
ENSXCOG00000007398apobec2b10052.344ENSSPAG00000016299-9654.274Stegastes_partitus
ENSXCOG00000007398apobec2b10078.676ENSSPAG00000005253apobec2b10078.309Stegastes_partitus
ENSXCOG00000007398apobec2b7759.113ENSSSCG00000036018APOBEC29159.113Sus_scrofa
ENSXCOG00000007398apobec2b7257.979ENSTGUG00000018533APOBEC29255.665Taeniopygia_guttata
ENSXCOG00000007398apobec2b10051.575ENSTRUG00000009123apobec2a9552.564Takifugu_rubripes
ENSXCOG00000007398apobec2b10067.778ENSTRUG00000012839apobec2b10065.926Takifugu_rubripes
ENSXCOG00000007398apobec2b10068.889ENSTNIG00000015038apobec2b10067.037Tetraodon_nigroviridis
ENSXCOG00000007398apobec2b7759.406ENSTBEG00000003553APOBEC29059.406Tupaia_belangeri
ENSXCOG00000007398apobec2b7757.921ENSTTRG00000013392APOBEC29057.921Tursiops_truncatus
ENSXCOG00000007398apobec2b7359.162ENSUAMG00000027667APOBEC28459.162Ursus_americanus
ENSXCOG00000007398apobec2b7360.733ENSVVUG00000026617APOBEC28560.733Vulpes_vulpes
ENSXCOG00000007398apobec2b8545.690ENSXETG00000008007apobec28949.289Xenopus_tropicalis
ENSXCOG00000007398apobec2b10099.259ENSXMAG00000008134apobec2b10099.259Xiphophorus_maculatus

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