EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008042 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 7170 bases
Position: chrKQ557221.1:9427746-9434915
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000010639	MMR_HSR1	PF01926.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000010763	-	657	-	ENSXCOP00000010639	218 (aa)	-	UPI0000364045

Gene Model

Click here to download ENSXCOG00000008042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008042	-	72	42.857	ENSXCOG00000009094	rab9b	79	42.857
ENSXCOG00000008042	-	66	43.333	ENSXCOG00000012032	-	68	43.333
ENSXCOG00000008042	-	87	47.917	ENSXCOG00000013842	rab1ab	95	47.917
ENSXCOG00000008042	-	84	41.398	ENSXCOG00000003428	rab42a	85	41.398
ENSXCOG00000008042	-	72	40.491	ENSXCOG00000019921	rab7a	78	40.491
ENSXCOG00000008042	-	77	33.929	ENSXCOG00000020608	hrasb	91	35.632
ENSXCOG00000008042	-	82	38.587	ENSXCOG00000013344	rab33a	64	38.587
ENSXCOG00000008042	-	99	81.193	ENSXCOG00000004226	rab11al	99	81.193
ENSXCOG00000008042	-	85	71.351	ENSXCOG00000004227	rab25b	100	63.303
ENSXCOG00000008042	-	73	30.723	ENSXCOG00000013226	rasd4	77	30.723
ENSXCOG00000008042	-	94	33.495	ENSXCOG00000007650	rras	95	33.333
ENSXCOG00000008042	-	80	46.591	ENSXCOG00000006807	rab39bb	83	46.591
ENSXCOG00000008042	-	70	35.256	ENSXCOG00000009541	rab34a	60	35.256
ENSXCOG00000008042	-	74	40.719	ENSXCOG00000020575	RAB9A	75	40.719
ENSXCOG00000008042	-	95	32.883	ENSXCOG00000008410	si:dkey-34d22.5	97	32.883
ENSXCOG00000008042	-	72	36.306	ENSXCOG00000002232	rab6bb	75	36.306
ENSXCOG00000008042	-	66	34.722	ENSXCOG00000019281	rheb	79	34.722
ENSXCOG00000008042	-	70	34.839	ENSXCOG00000020508	kras	87	35.928
ENSXCOG00000008042	-	75	47.239	ENSXCOG00000016788	rab5c	76	47.239
ENSXCOG00000008042	-	53	31.092	ENSXCOG00000003892	arl4d	58	31.092
ENSXCOG00000008042	-	81	50.847	ENSXCOG00000010770	-	71	50.847
ENSXCOG00000008042	-	100	87.156	ENSXCOG00000001357	rab11a	82	87.156
ENSXCOG00000008042	-	59	31.061	ENSXCOG00000011229	rras2	85	30.128
ENSXCOG00000008042	-	75	46.626	ENSXCOG00000006300	-	89	42.157
ENSXCOG00000008042	-	95	37.736	ENSXCOG00000019310	rab12	83	37.736
ENSXCOG00000008042	-	64	46.429	ENSXCOG00000003192	-	65	46.429
ENSXCOG00000008042	-	78	41.040	ENSXCOG00000018683	zgc:101559	74	41.040
ENSXCOG00000008042	-	94	32.864	ENSXCOG00000016370	RAB29	98	32.864
ENSXCOG00000008042	-	96	43.128	ENSXCOG00000010695	zgc:171927	99	43.128
ENSXCOG00000008042	-	99	63.303	ENSXCOG00000020125	rab25a	91	75.556
ENSXCOG00000008042	-	94	40.686	ENSXCOG00000020121	rab5aa	89	40.686
ENSXCOG00000008042	-	78	38.043	ENSXCOG00000000469	rab33ba	76	38.043
ENSXCOG00000008042	-	72	40.994	ENSXCOG00000019054	rab9a	73	40.994
ENSXCOG00000008042	-	72	37.580	ENSXCOG00000006259	rab6a	75	37.580
ENSXCOG00000008042	-	74	43.478	ENSXCOG00000016452	rab22a	83	43.478
ENSXCOG00000008042	-	72	36.943	ENSXCOG00000015802	RAB41	74	36.943
ENSXCOG00000008042	-	81	46.023	ENSXCOG00000019533	rab13	94	46.023
ENSXCOG00000008042	-	79	36.047	ENSXCOG00000011864	rab23	80	36.126
ENSXCOG00000008042	-	61	96.992	ENSXCOG00000009194	-	98	96.992
ENSXCOG00000008042	-	100	97.706	ENSXCOG00000009190	-	100	97.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008042	-	100	100.000	ENSAPOG00000023455	rab11bb	100	100.000	Acanthochromis_polyacanthus
ENSXCOG00000008042	-	100	97.706	ENSACIG00000024376	-	100	97.706	Amphilophus_citrinellus
ENSXCOG00000008042	-	100	87.156	ENSACIG00000019631	rab11bb	100	87.156	Amphilophus_citrinellus
ENSXCOG00000008042	-	100	97.706	ENSAOCG00000018849	-	100	97.706	Amphiprion_ocellaris
ENSXCOG00000008042	-	100	100.000	ENSAOCG00000018239	rab11bb	100	100.000	Amphiprion_ocellaris
ENSXCOG00000008042	-	100	100.000	ENSAPEG00000016590	rab11bb	100	100.000	Amphiprion_percula
ENSXCOG00000008042	-	100	100.000	ENSATEG00000017696	rab11bb	100	100.000	Anabas_testudineus
ENSXCOG00000008042	-	100	98.165	ENSATEG00000023725	-	100	98.165	Anabas_testudineus
ENSXCOG00000008042	-	94	98.058	ENSAPLG00000011046	-	94	98.058	Anas_platyrhynchos
ENSXCOG00000008042	-	100	100.000	ENSACLG00000007076	rab11bb	100	100.000	Astatotilapia_calliptera
ENSXCOG00000008042	-	100	97.706	ENSACLG00000005446	-	100	97.706	Astatotilapia_calliptera
ENSXCOG00000008042	-	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSXCOG00000008042	-	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSXCOG00000008042	-	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSXCOG00000008042	-	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSXCOG00000008042	-	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSXCOG00000008042	-	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSXCOG00000008042	-	100	97.248	ENSCSEG00000007239	-	100	97.248	Cynoglossus_semilaevis
ENSXCOG00000008042	-	100	100.000	ENSCSEG00000012149	rab11bb	100	100.000	Cynoglossus_semilaevis
ENSXCOG00000008042	-	100	94.495	ENSCVAG00000019751	-	100	94.495	Cyprinodon_variegatus
ENSXCOG00000008042	-	100	96.789	ENSCVAG00000019718	-	100	96.789	Cyprinodon_variegatus
ENSXCOG00000008042	-	100	100.000	ENSCVAG00000017021	-	100	100.000	Cyprinodon_variegatus
ENSXCOG00000008042	-	100	98.165	ENSDARG00000090086	rab11bb	100	98.165	Danio_rerio
ENSXCOG00000008042	-	99	94.931	ENSETEG00000000905	-	99	94.931	Echinops_telfairi
ENSXCOG00000008042	-	99	94.884	ENSEASG00005003708	-	99	94.884	Equus_asinus_asinus
ENSXCOG00000008042	-	99	94.884	ENSECAG00000000716	RAB11B	99	94.884	Equus_caballus
ENSXCOG00000008042	-	100	98.165	ENSELUG00000021148	rab11bb	100	98.165	Esox_lucius
ENSXCOG00000008042	-	100	96.330	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSXCOG00000008042	-	100	95.413	ENSELUG00000000916	-	100	95.413	Esox_lucius
ENSXCOG00000008042	-	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSXCOG00000008042	-	100	98.165	ENSFHEG00000022676	-	100	98.165	Fundulus_heteroclitus
ENSXCOG00000008042	-	100	100.000	ENSFHEG00000018353	rab11bb	100	100.000	Fundulus_heteroclitus
ENSXCOG00000008042	-	99	93.519	ENSGMOG00000009668	-	99	93.519	Gadus_morhua
ENSXCOG00000008042	-	100	99.541	ENSGMOG00000009211	rab11bb	100	99.541	Gadus_morhua
ENSXCOG00000008042	-	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSXCOG00000008042	-	100	100.000	ENSGAFG00000007102	rab11bb	100	100.000	Gambusia_affinis
ENSXCOG00000008042	-	100	94.495	ENSGACG00000013297	-	99	94.495	Gasterosteus_aculeatus
ENSXCOG00000008042	-	100	99.541	ENSGACG00000015479	rab11bb	100	99.541	Gasterosteus_aculeatus
ENSXCOG00000008042	-	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSXCOG00000008042	-	100	97.706	ENSHBUG00000009947	-	100	97.706	Haplochromis_burtoni
ENSXCOG00000008042	-	100	100.000	ENSHBUG00000014777	rab11bb	100	100.000	Haplochromis_burtoni
ENSXCOG00000008042	-	100	95.413	ENSHCOG00000000954	-	100	95.413	Hippocampus_comes
ENSXCOG00000008042	-	100	99.541	ENSHCOG00000002423	rab11bb	100	99.541	Hippocampus_comes
ENSXCOG00000008042	-	100	93.578	ENSHCOG00000000985	-	100	93.578	Hippocampus_comes
ENSXCOG00000008042	-	100	99.083	ENSIPUG00000019927	rab11bb	100	99.083	Ictalurus_punctatus
ENSXCOG00000008042	-	100	97.248	ENSIPUG00000025100	rab11b	100	97.248	Ictalurus_punctatus
ENSXCOG00000008042	-	100	100.000	ENSKMAG00000009033	rab11bb	100	100.000	Kryptolebias_marmoratus
ENSXCOG00000008042	-	100	97.706	ENSKMAG00000006170	-	100	97.706	Kryptolebias_marmoratus
ENSXCOG00000008042	-	100	96.789	ENSLBEG00000004172	-	100	96.789	Labrus_bergylta
ENSXCOG00000008042	-	100	99.541	ENSLBEG00000015248	rab11bb	100	99.541	Labrus_bergylta
ENSXCOG00000008042	-	100	89.450	ENSLBEG00000005981	-	100	89.450	Labrus_bergylta
ENSXCOG00000008042	-	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSXCOG00000008042	-	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSXCOG00000008042	-	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSXCOG00000008042	-	100	96.789	ENSMAMG00000018533	-	100	96.789	Mastacembelus_armatus
ENSXCOG00000008042	-	100	99.541	ENSMAMG00000006378	rab11bb	100	99.541	Mastacembelus_armatus
ENSXCOG00000008042	-	100	97.706	ENSMZEG00005010975	-	100	97.706	Maylandia_zebra
ENSXCOG00000008042	-	100	100.000	ENSMZEG00005003352	rab11bb	100	100.000	Maylandia_zebra
ENSXCOG00000008042	-	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSXCOG00000008042	-	94	100.000	ENSMMOG00000007917	rab11bb	100	100.000	Mola_mola
ENSXCOG00000008042	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSXCOG00000008042	-	100	97.706	ENSMMOG00000001250	-	100	97.706	Mola_mola
ENSXCOG00000008042	-	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSXCOG00000008042	-	100	100.000	ENSMALG00000022187	rab11bb	100	100.000	Monopterus_albus
ENSXCOG00000008042	-	94	87.923	ENSMLUG00000006677	-	100	87.923	Myotis_lucifugus
ENSXCOG00000008042	-	100	97.706	ENSNBRG00000023885	-	100	97.706	Neolamprologus_brichardi
ENSXCOG00000008042	-	100	100.000	ENSNBRG00000000372	rab11bb	100	100.000	Neolamprologus_brichardi
ENSXCOG00000008042	-	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSXCOG00000008042	-	100	97.706	ENSONIG00000002544	-	100	97.706	Oreochromis_niloticus
ENSXCOG00000008042	-	100	100.000	ENSONIG00000010435	rab11bb	100	100.000	Oreochromis_niloticus
ENSXCOG00000008042	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSXCOG00000008042	-	100	99.541	ENSORLG00000013938	rab11bb	100	99.541	Oryzias_latipes
ENSXCOG00000008042	-	99	95.853	ENSORLG00000015284	-	72	95.853	Oryzias_latipes
ENSXCOG00000008042	-	100	99.541	ENSORLG00020019393	rab11bb	100	99.541	Oryzias_latipes_hni
ENSXCOG00000008042	-	99	95.853	ENSORLG00020020844	RAB11B	99	95.853	Oryzias_latipes_hni
ENSXCOG00000008042	-	99	95.853	ENSORLG00015016999	RAB11B	99	95.853	Oryzias_latipes_hsok
ENSXCOG00000008042	-	100	99.541	ENSORLG00015020173	rab11bb	100	99.541	Oryzias_latipes_hsok
ENSXCOG00000008042	-	100	96.789	ENSOMEG00000002562	-	100	96.789	Oryzias_melastigma
ENSXCOG00000008042	-	100	100.000	ENSOMEG00000017806	-	100	100.000	Oryzias_melastigma
ENSXCOG00000008042	-	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSXCOG00000008042	-	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSXCOG00000008042	-	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSXCOG00000008042	-	98	97.196	ENSPKIG00000001389	-	69	97.196	Paramormyrops_kingsleyae
ENSXCOG00000008042	-	100	99.083	ENSPKIG00000011640	rab11bb	100	99.083	Paramormyrops_kingsleyae
ENSXCOG00000008042	-	100	98.624	ENSPKIG00000011703	-	100	98.624	Paramormyrops_kingsleyae
ENSXCOG00000008042	-	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSXCOG00000008042	-	100	100.000	ENSPMGG00000009435	rab11bb	100	100.000	Periophthalmus_magnuspinnatus
ENSXCOG00000008042	-	99	93.088	ENSPMGG00000014336	-	99	93.088	Periophthalmus_magnuspinnatus
ENSXCOG00000008042	-	100	96.789	ENSPMGG00000014333	-	100	96.789	Periophthalmus_magnuspinnatus
ENSXCOG00000008042	-	97	95.755	ENSPCIG00000020371	-	99	95.755	Phascolarctos_cinereus
ENSXCOG00000008042	-	100	100.000	ENSPFOG00000024114	-	100	100.000	Poecilia_formosa
ENSXCOG00000008042	-	100	97.706	ENSPFOG00000006224	-	100	97.706	Poecilia_formosa
ENSXCOG00000008042	-	100	100.000	ENSPLAG00000001598	rab11bb	100	100.000	Poecilia_latipinna
ENSXCOG00000008042	-	100	97.706	ENSPLAG00000014207	-	100	97.706	Poecilia_latipinna
ENSXCOG00000008042	-	100	100.000	ENSPMEG00000012389	rab11bb	100	100.000	Poecilia_mexicana
ENSXCOG00000008042	-	100	97.706	ENSPMEG00000007842	-	100	97.706	Poecilia_mexicana
ENSXCOG00000008042	-	100	97.248	ENSPREG00000006336	-	100	97.248	Poecilia_reticulata
ENSXCOG00000008042	-	100	100.000	ENSPREG00000014269	rab11bb	100	100.000	Poecilia_reticulata
ENSXCOG00000008042	-	100	97.706	ENSPNYG00000019611	-	100	97.706	Pundamilia_nyererei
ENSXCOG00000008042	-	100	100.000	ENSPNYG00000004098	rab11bb	100	100.000	Pundamilia_nyererei
ENSXCOG00000008042	-	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSXCOG00000008042	-	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSXCOG00000008042	-	100	75.229	ENSSFOG00015006245	-	100	75.229	Scleropages_formosus
ENSXCOG00000008042	-	100	97.706	ENSSFOG00015009042	rab11bb	100	97.706	Scleropages_formosus
ENSXCOG00000008042	-	100	94.954	ENSSMAG00000018613	-	100	94.954	Scophthalmus_maximus
ENSXCOG00000008042	-	100	99.541	ENSSMAG00000004922	rab11bb	100	99.541	Scophthalmus_maximus
ENSXCOG00000008042	-	100	100.000	ENSSDUG00000013558	rab11bb	100	100.000	Seriola_dumerili
ENSXCOG00000008042	-	100	97.706	ENSSDUG00000002934	-	100	97.706	Seriola_dumerili
ENSXCOG00000008042	-	100	100.000	ENSSLDG00000020676	rab11bb	100	100.000	Seriola_lalandi_dorsalis
ENSXCOG00000008042	-	100	97.706	ENSSLDG00000005275	-	100	97.706	Seriola_lalandi_dorsalis
ENSXCOG00000008042	-	100	96.789	ENSSPUG00000002243	-	100	96.789	Sphenodon_punctatus
ENSXCOG00000008042	-	100	97.706	ENSSPAG00000014559	-	100	97.706	Stegastes_partitus
ENSXCOG00000008042	-	100	100.000	ENSSPAG00000011419	rab11bb	100	100.000	Stegastes_partitus
ENSXCOG00000008042	-	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSXCOG00000008042	-	100	100.000	ENSTRUG00000022029	rab11bb	100	100.000	Takifugu_rubripes
ENSXCOG00000008042	-	99	94.931	ENSTRUG00000021614	-	99	94.931	Takifugu_rubripes
ENSXCOG00000008042	-	99	97.685	ENSTRUG00000021619	-	100	97.685	Takifugu_rubripes
ENSXCOG00000008042	-	99	94.470	ENSTNIG00000013184	-	99	94.470	Tetraodon_nigroviridis
ENSXCOG00000008042	-	99	97.685	ENSTNIG00000013182	-	100	97.685	Tetraodon_nigroviridis
ENSXCOG00000008042	-	100	98.624	ENSTNIG00000011081	rab11bb	100	98.624	Tetraodon_nigroviridis
ENSXCOG00000008042	-	93	96.552	ENSTNIG00000002003	-	100	96.552	Tetraodon_nigroviridis
ENSXCOG00000008042	-	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSXCOG00000008042	-	100	97.260	ENSXETG00000025484	rab11b.1	99	97.260	Xenopus_tropicalis
ENSXCOG00000008042	-	100	100.000	ENSXMAG00000011926	rab11bb	100	100.000	Xiphophorus_maculatus
ENSXCOG00000008042	-	100	97.248	ENSXMAG00000024840	-	100	97.248	Xiphophorus_maculatus