EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000008068 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Plus strand
Length
4288 bases
Position
chrKQ557224.1:27097524-27101811
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000010682RRM_1PF00076.223.2e-3012
ENSXCOP00000010682RRM_1PF00076.223.2e-3022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000010806-435-ENSXCOP00000010682144 (aa)--
Gene Model
Click here to download ENSXCOG00000008068's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008068's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000008068-8734.177ENSXCOG00000013190pabpc48234.177
ENSXCOG00000008068-9232.584ENSXCOG00000017066pabpc1a6032.584
ENSXCOG00000008068-9035.897ENSXCOG00000005459pabpc1l6635.897
ENSXCOG00000008068-5530.380ENSXCOG00000014895zcrb15330.380
ENSXCOG00000008068-8870.635ENSXCOG00000002464ELAVL27670.635
ENSXCOG00000008068-5036.111ENSXCOG00000008262cirbpa7837.097
ENSXCOG00000008068-9082.171ENSXCOG00000014236elavl1a7682.171
ENSXCOG00000008068-6537.500ENSXCOG00000017592celf45334.737
ENSXCOG00000008068-6239.773ENSXCOG00000008353si:dkey-205h23.25136.842
ENSXCOG00000008068-9230.769ENSXCOG00000008899-8630.769
ENSXCOG00000008068-9232.308ENSXCOG00000017733tia1l8732.308
ENSXCOG00000008068-9231.461ENSXCOG00000019901pabpc1b5931.461
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000008068-9083.459ENSG00000066044ELAVL18783.459Homo_sapiens
ENSXCOG00000008068-9093.846ENSAPOG00000001912-7893.846Acanthochromis_polyacanthus
ENSXCOG00000008068-9083.721ENSAPOG00000002277elavl1a7283.721Acanthochromis_polyacanthus
ENSXCOG00000008068-8885.827ENSAMEG00000008657ELAVL17385.827Ailuropoda_melanoleuca
ENSXCOG00000008068-9084.496ENSACIG00000018226elavl1a7284.496Amphilophus_citrinellus
ENSXCOG00000008068-9093.077ENSACIG00000000511-7793.077Amphilophus_citrinellus
ENSXCOG00000008068-9083.721ENSAOCG00000020018elavl1a7283.721Amphiprion_ocellaris
ENSXCOG00000008068-9093.077ENSAOCG00000023751-7493.077Amphiprion_ocellaris
ENSXCOG00000008068-9093.077ENSAPEG00000003694-7893.077Amphiprion_percula
ENSXCOG00000008068-9083.721ENSAPEG00000012830elavl1a7283.721Amphiprion_percula
ENSXCOG00000008068-8891.339ENSATEG00000006741-6591.339Anabas_testudineus
ENSXCOG00000008068-9085.271ENSATEG00000007662elavl1a7285.271Anabas_testudineus
ENSXCOG00000008068-8885.039ENSAPLG00000003139ELAVL17585.039Anas_platyrhynchos
ENSXCOG00000008068-9477.305ENSANAG00000037170-9581.203Aotus_nancymaae
ENSXCOG00000008068-9081.955ENSANAG00000027297-9281.955Aotus_nancymaae
ENSXCOG00000008068-9075.188ENSANAG00000031135-6775.188Aotus_nancymaae
ENSXCOG00000008068-9282.576ENSACLG00000009328elavl1a7182.576Astatotilapia_calliptera
ENSXCOG00000008068-8994.531ENSACLG00000019504-7394.531Astatotilapia_calliptera
ENSXCOG00000008068-9183.206ENSAMXG00000031223elavl1a7383.206Astyanax_mexicanus
ENSXCOG00000008068-9181.679ENSAMXG00000006391elavl1b7381.679Astyanax_mexicanus
ENSXCOG00000008068-8885.039ENSBTAG00000000613ELAVL17585.039Bos_taurus
ENSXCOG00000008068-9083.459ENSCJAG00000046587ELAVL18783.459Callithrix_jacchus
ENSXCOG00000008068-8845.385ENSCAFG00000024229-6045.385Canis_familiaris
ENSXCOG00000008068-8885.827ENSCAFG00000018353-7385.827Canis_familiaris
ENSXCOG00000008068-8885.827ENSCAFG00020022841-7585.827Canis_lupus_dingo
ENSXCOG00000008068-8883.465ENSCAFG00020026232-8583.465Canis_lupus_dingo
ENSXCOG00000008068-8885.039ENSCHIG00000014334ELAVL17585.039Capra_hircus
ENSXCOG00000008068-9083.459ENSTSYG00000008248ELAVL18783.459Carlito_syrichta
ENSXCOG00000008068-8475.248ENSCAPG00000009014ELAVL17275.248Cavia_aperea
ENSXCOG00000008068-8569.912ENSCPOG00000011884ELAVL17769.912Cavia_porcellus
ENSXCOG00000008068-9083.459ENSCCAG00000025328ELAVL18783.459Cebus_capucinus
ENSXCOG00000008068-9083.459ENSCATG00000032090ELAVL18783.459Cercocebus_atys
ENSXCOG00000008068-8885.827ENSCLAG00000007826ELAVL17585.827Chinchilla_lanigera
ENSXCOG00000008068-9083.459ENSCSAG00000008155ELAVL17783.459Chlorocebus_sabaeus
ENSXCOG00000008068-8484.337ENSCHOG00000006810-7584.337Choloepus_hoffmanni
ENSXCOG00000008068-8583.673ENSCHOG00000002832-7183.673Choloepus_hoffmanni
ENSXCOG00000008068-8885.827ENSCPBG00000017097ELAVL15685.827Chrysemys_picta_bellii
ENSXCOG00000008068-9083.459ENSCANG00000041972ELAVL18783.459Colobus_angolensis_palliatus
ENSXCOG00000008068-8885.827ENSCGRG00001013676Elavl17585.827Cricetulus_griseus_chok1gshd
ENSXCOG00000008068-8885.827ENSCGRG00000001625Elavl17585.827Cricetulus_griseus_crigri
ENSXCOG00000008068-9191.603ENSCSEG00000000688-7391.603Cynoglossus_semilaevis
ENSXCOG00000008068-9083.721ENSCSEG00000003608elavl1a6883.721Cynoglossus_semilaevis
ENSXCOG00000008068-9199.237ENSCVAG00000016617-7499.237Cyprinodon_variegatus
ENSXCOG00000008068-9082.171ENSCVAG00000017170elavl1a7682.171Cyprinodon_variegatus
ENSXCOG00000008068-9183.206ENSDARG00000038695elavl1a8283.206Danio_rerio
ENSXCOG00000008068-9180.153ENSDARG00000101744elavl1b7780.153Danio_rerio
ENSXCOG00000008068-8885.827ENSDNOG00000008797ELAVL17585.827Dasypus_novemcinctus
ENSXCOG00000008068-8885.827ENSDORG00000009158Elavl17585.827Dipodomys_ordii
ENSXCOG00000008068-8484.337ENSETEG00000012985ELAVL17584.337Echinops_telfairi
ENSXCOG00000008068-8885.039ENSEASG00005003790ELAVL17585.039Equus_asinus_asinus
ENSXCOG00000008068-8885.039ENSECAG00000019459ELAVL17585.039Equus_caballus
ENSXCOG00000008068-9184.733ENSELUG00000003289-7384.733Esox_lucius
ENSXCOG00000008068-9082.946ENSELUG00000008024elavl1a7282.946Esox_lucius
ENSXCOG00000008068-9681.884ENSFCAG00000034143ELAVL19081.884Felis_catus
ENSXCOG00000008068-8885.039ENSFALG00000011725ELAVL16185.039Ficedula_albicollis
ENSXCOG00000008068-8885.827ENSFDAG00000021259ELAVL17585.827Fukomys_damarensis
ENSXCOG00000008068-91100.000ENSFHEG00000014715-79100.000Fundulus_heteroclitus
ENSXCOG00000008068-9480.147ENSFHEG00000015979elavl1a7580.147Fundulus_heteroclitus
ENSXCOG00000008068-9083.721ENSGMOG00000014835elavl1a7683.721Gadus_morhua
ENSXCOG00000008068-9161.538ENSGMOG00000014008-7761.538Gadus_morhua
ENSXCOG00000008068-8885.039ENSGALG00000000726ELAVL17585.039Gallus_gallus
ENSXCOG00000008068-91100.000ENSGAFG00000000715-78100.000Gambusia_affinis
ENSXCOG00000008068-9082.946ENSGAFG00000019133elavl1a7782.946Gambusia_affinis
ENSXCOG00000008068-9185.714ENSGACG00000010657elavl1a7785.714Gasterosteus_aculeatus
ENSXCOG00000008068-9795.745ENSGACG00000013329-7093.077Gasterosteus_aculeatus
ENSXCOG00000008068-8885.827ENSGAGG00000024119ELAVL17585.827Gopherus_agassizii
ENSXCOG00000008068-9083.459ENSGGOG00000006100ELAVL18783.459Gorilla_gorilla
ENSXCOG00000008068-9083.721ENSHBUG00000007897elavl1a7283.721Haplochromis_burtoni
ENSXCOG00000008068-9093.846ENSHBUG00000007503-7493.846Haplochromis_burtoni
ENSXCOG00000008068-8885.827ENSHGLG00000016101ELAVL17585.827Heterocephalus_glaber_female
ENSXCOG00000008068-8882.677ENSHGLG00000008478-7682.677Heterocephalus_glaber_female
ENSXCOG00000008068-8882.677ENSHGLG00100000375-7782.677Heterocephalus_glaber_male
ENSXCOG00000008068-8885.827ENSHGLG00100007070ELAVL17585.827Heterocephalus_glaber_male
ENSXCOG00000008068-8988.281ENSHCOG00000020439-6588.281Hippocampus_comes
ENSXCOG00000008068-9079.070ENSHCOG00000015240elavl1a7279.070Hippocampus_comes
ENSXCOG00000008068-9082.171ENSIPUG00000015781elavl1b6882.171Ictalurus_punctatus
ENSXCOG00000008068-9183.969ENSIPUG00000014082elavl1a6983.969Ictalurus_punctatus
ENSXCOG00000008068-8885.827ENSSTOG00000009130ELAVL17585.827Ictidomys_tridecemlineatus
ENSXCOG00000008068-8885.827ENSJJAG00000015838Elavl17585.827Jaculus_jaculus
ENSXCOG00000008068-9083.721ENSKMAG00000014042elavl1a7683.721Kryptolebias_marmoratus
ENSXCOG00000008068-9096.154ENSKMAG00000006259-7896.154Kryptolebias_marmoratus
ENSXCOG00000008068-9093.077ENSLBEG00000028513-5793.077Labrus_bergylta
ENSXCOG00000008068-9083.721ENSLBEG00000021924elavl1a7283.721Labrus_bergylta
ENSXCOG00000008068-8983.594ENSLACG00000017607ELAVL17582.308Latimeria_chalumnae
ENSXCOG00000008068-9183.206ENSLOCG00000000284elavl1b7383.206Lepisosteus_oculatus
ENSXCOG00000008068-8885.827ENSLAFG00000004219ELAVL17585.827Loxodonta_africana
ENSXCOG00000008068-9083.459ENSMFAG00000040787ELAVL18783.459Macaca_fascicularis
ENSXCOG00000008068-9083.459ENSMMUG00000006544ELAVL18783.459Macaca_mulatta
ENSXCOG00000008068-9083.459ENSMNEG00000028431ELAVL18783.459Macaca_nemestrina
ENSXCOG00000008068-9083.459ENSMLEG00000037227ELAVL18783.459Mandrillus_leucophaeus
ENSXCOG00000008068-8992.188ENSMAMG00000006701-7392.188Mastacembelus_armatus
ENSXCOG00000008068-9084.091ENSMAMG00000002385elavl1a7284.091Mastacembelus_armatus
ENSXCOG00000008068-9093.846ENSMZEG00005020865-7993.846Maylandia_zebra
ENSXCOG00000008068-9282.576ENSMZEG00005015772elavl1a7182.576Maylandia_zebra
ENSXCOG00000008068-9093.846ENSMZEG00005020888-6193.846Maylandia_zebra
ENSXCOG00000008068-8583.529ENSMGAG00000001015ELAVL17583.529Meleagris_gallopavo
ENSXCOG00000008068-8885.827ENSMAUG00000000924Elavl17585.827Mesocricetus_auratus
ENSXCOG00000008068-9083.459ENSMICG00000009699ELAVL19583.459Microcebus_murinus
ENSXCOG00000008068-8885.827ENSMOCG00000014588Elavl17585.827Microtus_ochrogaster
ENSXCOG00000008068-9480.882ENSMMOG00000011938elavl1a7680.882Mola_mola
ENSXCOG00000008068-8991.406ENSMMOG00000008014-7891.406Mola_mola
ENSXCOG00000008068-8885.827ENSMODG00000005041ELAVL16285.156Monodelphis_domestica
ENSXCOG00000008068-9090.769ENSMALG00000021265-7790.769Monopterus_albus
ENSXCOG00000008068-9083.721ENSMALG00000010070elavl1a7683.721Monopterus_albus
ENSXCOG00000008068-8885.827MGP_CAROLIEiJ_G0030798Elavl17585.827Mus_caroli
ENSXCOG00000008068-8885.827ENSMUSG00000040028Elavl17585.827Mus_musculus
ENSXCOG00000008068-8885.827MGP_PahariEiJ_G0021261Elavl17585.827Mus_pahari
ENSXCOG00000008068-8885.827MGP_SPRETEiJ_G0031906Elavl17585.827Mus_spretus
ENSXCOG00000008068-8885.827ENSMPUG00000007991ELAVL17585.827Mustela_putorius_furo
ENSXCOG00000008068-8885.039ENSMLUG00000008101-7285.039Myotis_lucifugus
ENSXCOG00000008068-8885.827ENSNGAG00000019590Elavl17585.827Nannospalax_galili
ENSXCOG00000008068-9283.333ENSNBRG00000021290elavl1a7183.333Neolamprologus_brichardi
ENSXCOG00000008068-9093.846ENSNBRG00000006218-7493.846Neolamprologus_brichardi
ENSXCOG00000008068-8885.714ENSNLEG00000001325ELAVL18285.714Nomascus_leucogenys
ENSXCOG00000008068-8884.252ENSOPRG00000009691-7584.252Ochotona_princeps
ENSXCOG00000008068-8885.827ENSODEG00000012189ELAVL17585.827Octodon_degus
ENSXCOG00000008068-9480.882ENSONIG00000001096elavl1a7080.882Oreochromis_niloticus
ENSXCOG00000008068-9093.846ENSONIG00000003197-7493.846Oreochromis_niloticus
ENSXCOG00000008068-9382.836ENSOANG00000022373-8882.836Ornithorhynchus_anatinus
ENSXCOG00000008068-8884.252ENSOCUG00000015871ELAVL15984.252Oryctolagus_cuniculus
ENSXCOG00000008068-9086.047ENSORLG00000012435elavl1a7286.047Oryzias_latipes
ENSXCOG00000008068-9093.846ENSORLG00000000087-6993.846Oryzias_latipes
ENSXCOG00000008068-9093.846ENSORLG00020012447-6993.846Oryzias_latipes_hni
ENSXCOG00000008068-9086.047ENSORLG00020019326elavl1a7286.047Oryzias_latipes_hni
ENSXCOG00000008068-9093.846ENSORLG00015008332-6993.846Oryzias_latipes_hsok
ENSXCOG00000008068-9086.047ENSORLG00015016801elavl1a7286.047Oryzias_latipes_hsok
ENSXCOG00000008068-9093.846ENSOMEG00000015322-7391.045Oryzias_melastigma
ENSXCOG00000008068-9086.047ENSOMEG00000015457elavl1a7286.047Oryzias_melastigma
ENSXCOG00000008068-9083.459ENSOGAG00000012877ELAVL17783.459Otolemur_garnettii
ENSXCOG00000008068-8885.039ENSOARG00000003168ELAVL17285.039Ovis_aries
ENSXCOG00000008068-9083.459ENSPPAG00000035262ELAVL18783.459Pan_paniscus
ENSXCOG00000008068-9681.884ENSPPRG00000002521ELAVL19081.884Panthera_pardus
ENSXCOG00000008068-9681.884ENSPTIG00000013602ELAVL19081.884Panthera_tigris_altaica
ENSXCOG00000008068-9083.459ENSPTRG00000010413ELAVL18783.459Pan_troglodytes
ENSXCOG00000008068-9083.459ENSPANG00000025878ELAVL18783.459Papio_anubis
ENSXCOG00000008068-9183.206ENSPKIG00000023897-7383.206Paramormyrops_kingsleyae
ENSXCOG00000008068-9185.496ENSPKIG00000003894ELAVL17685.496Paramormyrops_kingsleyae
ENSXCOG00000008068-8885.827ENSPSIG00000013736ELAVL17585.827Pelodiscus_sinensis
ENSXCOG00000008068-9183.969ENSPMGG00000015593-7883.969Periophthalmus_magnuspinnatus
ENSXCOG00000008068-9478.676ENSPMGG00000015849elavl1a7978.676Periophthalmus_magnuspinnatus
ENSXCOG00000008068-91100.000ENSPFOG00000009739ELAVL174100.000Poecilia_formosa
ENSXCOG00000008068-9082.946ENSPFOG00000014116elavl1a7282.946Poecilia_formosa
ENSXCOG00000008068-9082.946ENSPLAG00000008127elavl1a7282.946Poecilia_latipinna
ENSXCOG00000008068-91100.000ENSPLAG00000020810ELAVL178100.000Poecilia_latipinna
ENSXCOG00000008068-9082.946ENSPMEG00000002868elavl1a7282.946Poecilia_mexicana
ENSXCOG00000008068-91100.000ENSPMEG00000000283ELAVL178100.000Poecilia_mexicana
ENSXCOG00000008068-91100.000ENSPREG00000005877-78100.000Poecilia_reticulata
ENSXCOG00000008068-9082.946ENSPREG00000011054elavl1a7782.946Poecilia_reticulata
ENSXCOG00000008068-9083.459ENSPPYG00000009496ELAVL17783.459Pongo_abelii
ENSXCOG00000008068-8484.337ENSPCAG00000016012ELAVL17584.337Procavia_capensis
ENSXCOG00000008068-9083.459ENSPCOG00000003300ELAVL19583.459Propithecus_coquereli
ENSXCOG00000008068-8864.567ENSPVAG00000002299ELAVL17564.567Pteropus_vampyrus
ENSXCOG00000008068-9282.576ENSPNYG00000012769elavl1a7182.576Pundamilia_nyererei
ENSXCOG00000008068-9093.846ENSPNYG00000013107-7493.846Pundamilia_nyererei
ENSXCOG00000008068-9183.206ENSPNAG00000010909elavl1a7383.206Pygocentrus_nattereri
ENSXCOG00000008068-9183.206ENSPNAG00000024381elavl1b7383.206Pygocentrus_nattereri
ENSXCOG00000008068-8885.827ENSRNOG00000001069Elavl17585.827Rattus_norvegicus
ENSXCOG00000008068-9073.684ENSRBIG00000029014-8673.684Rhinopithecus_bieti
ENSXCOG00000008068-9083.459ENSRBIG00000032339-8783.459Rhinopithecus_bieti
ENSXCOG00000008068-9083.459ENSRROG00000037769ELAVL18783.459Rhinopithecus_roxellana
ENSXCOG00000008068-9083.459ENSSBOG00000028871ELAVL18783.459Saimiri_boliviensis_boliviensis
ENSXCOG00000008068-8885.827ENSSHAG00000008109ELAVL17585.827Sarcophilus_harrisii
ENSXCOG00000008068-9183.206ENSSFOG00015021786ELAVL17683.206Scleropages_formosus
ENSXCOG00000008068-9183.206ENSSFOG00015017503-7383.206Scleropages_formosus
ENSXCOG00000008068-9085.271ENSSMAG00000014763elavl1a7285.271Scophthalmus_maximus
ENSXCOG00000008068-8992.969ENSSMAG00000014353-6892.969Scophthalmus_maximus
ENSXCOG00000008068-9084.496ENSSDUG00000012465elavl1a7284.496Seriola_dumerili
ENSXCOG00000008068-9090.000ENSSDUG00000015257-7890.000Seriola_dumerili
ENSXCOG00000008068-9090.000ENSSLDG00000019362-7890.000Seriola_lalandi_dorsalis
ENSXCOG00000008068-9084.496ENSSLDG00000022499elavl1a7284.496Seriola_lalandi_dorsalis
ENSXCOG00000008068-8885.039ENSSPUG00000002077ELAVL17585.039Sphenodon_punctatus
ENSXCOG00000008068-9084.496ENSSPAG00000013543elavl1a7284.496Stegastes_partitus
ENSXCOG00000008068-9092.308ENSSPAG00000011250-7792.308Stegastes_partitus
ENSXCOG00000008068-8884.252ENSSSCG00000013592ELAVL17584.252Sus_scrofa
ENSXCOG00000008068-8885.039ENSTGUG00000000118ELAVL17585.039Taeniopygia_guttata
ENSXCOG00000008068-8989.062ENSTRUG00000007296-6489.062Takifugu_rubripes
ENSXCOG00000008068-9480.741ENSTRUG00000023704elavl1a7480.741Takifugu_rubripes
ENSXCOG00000008068-9068.421ENSTNIG00000004733-7768.421Tetraodon_nigroviridis
ENSXCOG00000008068-9481.752ENSTNIG00000019823elavl1a7881.752Tetraodon_nigroviridis
ENSXCOG00000008068-8861.417ENSTTRG00000010180ELAVL17561.417Tursiops_truncatus
ENSXCOG00000008068-8885.827ENSUAMG00000022313ELAVL17185.827Ursus_americanus
ENSXCOG00000008068-8885.827ENSUMAG00000014798ELAVL17185.827Ursus_maritimus
ENSXCOG00000008068-8885.827ENSVVUG00000026988-7085.827Vulpes_vulpes
ENSXCOG00000008068-8482.353ENSVVUG00000003187-6377.358Vulpes_vulpes
ENSXCOG00000008068-8885.827ENSXETG00000008752elavl17585.827Xenopus_tropicalis
ENSXCOG00000008068-9082.171ENSXMAG00000009362elavl1a7582.171Xiphophorus_maculatus
ENSXCOG00000008068-91100.000ENSXMAG00000030088-69100.000Xiphophorus_maculatus

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