EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000008082 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 11136 bases
Position: chrKQ557201.1:16490363-16501498
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000010708	PRP1_N	PF06424.12	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000010832	-	2910	-	ENSXCOP00000010708	969 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008082	prpf6	96	92.774	ENSG00000101161	PRPF6	100	92.349	Homo_sapiens
ENSXCOG00000008082	prpf6	100	97.420	ENSAPOG00000010395	prpf6	100	97.420	Acanthochromis_polyacanthus
ENSXCOG00000008082	prpf6	96	92.357	ENSAMEG00000001916	PRPF6	99	91.932	Ailuropoda_melanoleuca
ENSXCOG00000008082	prpf6	100	97.730	ENSACIG00000019862	prpf6	100	97.730	Amphilophus_citrinellus
ENSXCOG00000008082	prpf6	100	97.523	ENSAOCG00000012988	prpf6	100	97.523	Amphiprion_ocellaris
ENSXCOG00000008082	prpf6	96	91.505	ENSAPEG00000008301	prpf6	100	91.720	Amphiprion_percula
ENSXCOG00000008082	prpf6	100	97.110	ENSATEG00000005581	prpf6	100	97.110	Anabas_testudineus
ENSXCOG00000008082	prpf6	96	93.411	ENSACAG00000006464	PRPF6	95	92.986	Anolis_carolinensis
ENSXCOG00000008082	prpf6	96	92.774	ENSANAG00000012661	PRPF6	100	93.286	Aotus_nancymaae
ENSXCOG00000008082	prpf6	100	97.730	ENSACLG00000025875	prpf6	100	97.730	Astatotilapia_calliptera
ENSXCOG00000008082	prpf6	97	94.492	ENSAMXG00000001929	prpf6	100	92.828	Astyanax_mexicanus
ENSXCOG00000008082	prpf6	96	93.305	ENSBTAG00000011656	PRPF6	100	92.880	Bos_taurus
ENSXCOG00000008082	prpf6	96	92.774	ENSCJAG00000010616	PRPF6	100	92.349	Callithrix_jacchus
ENSXCOG00000008082	prpf6	96	93.411	ENSCAFG00000013165	PRPF6	100	92.986	Canis_familiaris
ENSXCOG00000008082	prpf6	96	93.411	ENSCAFG00020002050	PRPF6	100	92.986	Canis_lupus_dingo
ENSXCOG00000008082	prpf6	96	93.305	ENSCHIG00000018187	PRPF6	100	92.880	Capra_hircus
ENSXCOG00000008082	prpf6	96	93.411	ENSTSYG00000007814	PRPF6	100	92.986	Carlito_syrichta
ENSXCOG00000008082	prpf6	93	92.585	ENSCAPG00000015077	PRPF6	100	91.712	Cavia_aperea
ENSXCOG00000008082	prpf6	96	93.836	ENSCPOG00000007518	PRPF6	100	93.411	Cavia_porcellus
ENSXCOG00000008082	prpf6	96	89.692	ENSCCAG00000024564	PRPF6	100	89.267	Cebus_capucinus
ENSXCOG00000008082	prpf6	96	92.880	ENSCATG00000037473	PRPF6	100	92.455	Cercocebus_atys
ENSXCOG00000008082	prpf6	96	90.011	ENSCLAG00000003854	PRPF6	100	89.586	Chinchilla_lanigera
ENSXCOG00000008082	prpf6	96	88.279	ENSCSAG00000016742	PRPF6	100	87.856	Chlorocebus_sabaeus
ENSXCOG00000008082	prpf6	81	78.374	ENSCHOG00000003315	-	98	78.182	Choloepus_hoffmanni
ENSXCOG00000008082	prpf6	98	91.988	ENSCPBG00000013964	PRPF6	96	93.191	Chrysemys_picta_bellii
ENSXCOG00000008082	prpf6	96	72.727	ENSCING00000008817	-	99	72.304	Ciona_intestinalis
ENSXCOG00000008082	prpf6	96	92.667	ENSCANG00000038230	PRPF6	100	92.242	Colobus_angolensis_palliatus
ENSXCOG00000008082	prpf6	96	93.836	ENSCGRG00001022666	Prpf6	100	93.411	Cricetulus_griseus_chok1gshd
ENSXCOG00000008082	prpf6	96	92.151	ENSCSEG00000018561	prpf6	100	92.151	Cynoglossus_semilaevis
ENSXCOG00000008082	prpf6	100	97.730	ENSCVAG00000010550	prpf6	100	97.730	Cyprinodon_variegatus
ENSXCOG00000008082	prpf6	100	92.930	ENSDARG00000091367	prpf6	100	94.597	Danio_rerio
ENSXCOG00000008082	prpf6	96	92.774	ENSDNOG00000040544	PRPF6	100	92.455	Dasypus_novemcinctus
ENSXCOG00000008082	prpf6	87	92.874	ENSDORG00000005406	Prpf6	100	92.874	Dipodomys_ordii
ENSXCOG00000008082	prpf6	96	71.720	FBgn0036828	CG6841	99	71.828	Drosophila_melanogaster
ENSXCOG00000008082	prpf6	83	92.105	ENSETEG00000004447	PRPF6	85	92.105	Echinops_telfairi
ENSXCOG00000008082	prpf6	96	86.455	ENSEBUG00000008835	prpf6	100	86.032	Eptatretus_burgeri
ENSXCOG00000008082	prpf6	98	92.259	ENSEASG00005023115	PRPF6	100	93.092	Equus_asinus_asinus
ENSXCOG00000008082	prpf6	96	89.267	ENSECAG00000013983	PRPF6	100	88.842	Equus_caballus
ENSXCOG00000008082	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSXCOG00000008082	prpf6	97	94.698	ENSELUG00000001945	prpf6	94	94.698	Esox_lucius
ENSXCOG00000008082	prpf6	96	93.411	ENSFCAG00000001183	PRPF6	100	92.986	Felis_catus
ENSXCOG00000008082	prpf6	96	93.333	ENSFALG00000010326	-	98	93.016	Ficedula_albicollis
ENSXCOG00000008082	prpf6	99	85.346	ENSFALG00000006046	-	97	87.407	Ficedula_albicollis
ENSXCOG00000008082	prpf6	96	92.349	ENSFDAG00000006451	PRPF6	100	93.084	Fukomys_damarensis
ENSXCOG00000008082	prpf6	100	98.142	ENSFHEG00000000560	prpf6	100	98.142	Fundulus_heteroclitus
ENSXCOG00000008082	prpf6	97	93.955	ENSGMOG00000015622	prpf6	99	93.425	Gadus_morhua
ENSXCOG00000008082	prpf6	96	93.411	ENSGALG00000006001	PRPF6	100	93.092	Gallus_gallus
ENSXCOG00000008082	prpf6	100	94.737	ENSGAFG00000021109	prpf6	100	94.737	Gambusia_affinis
ENSXCOG00000008082	prpf6	97	95.869	ENSGACG00000002576	prpf6	100	95.869	Gasterosteus_aculeatus
ENSXCOG00000008082	prpf6	98	92.188	ENSGAGG00000008653	PRPF6	96	93.298	Gopherus_agassizii
ENSXCOG00000008082	prpf6	96	92.774	ENSGGOG00000016876	PRPF6	100	92.349	Gorilla_gorilla
ENSXCOG00000008082	prpf6	100	97.730	ENSHBUG00000004496	prpf6	100	97.730	Haplochromis_burtoni
ENSXCOG00000008082	prpf6	96	93.730	ENSHGLG00000009222	PRPF6	100	93.305	Heterocephalus_glaber_female
ENSXCOG00000008082	prpf6	93	93.675	ENSHGLG00100016600	PRPF6	100	93.239	Heterocephalus_glaber_male
ENSXCOG00000008082	prpf6	100	95.562	ENSHCOG00000011513	prpf6	100	95.562	Hippocampus_comes
ENSXCOG00000008082	prpf6	100	92.608	ENSIPUG00000004912	prpf6	100	92.608	Ictalurus_punctatus
ENSXCOG00000008082	prpf6	96	91.295	ENSSTOG00000002922	PRPF6	100	90.446	Ictidomys_tridecemlineatus
ENSXCOG00000008082	prpf6	96	93.836	ENSJJAG00000000836	Prpf6	100	93.411	Jaculus_jaculus
ENSXCOG00000008082	prpf6	100	97.626	ENSKMAG00000017800	prpf6	100	97.626	Kryptolebias_marmoratus
ENSXCOG00000008082	prpf6	100	96.285	ENSLBEG00000012582	prpf6	100	96.285	Labrus_bergylta
ENSXCOG00000008082	prpf6	96	94.468	ENSLOCG00000004827	prpf6	96	92.660	Lepisosteus_oculatus
ENSXCOG00000008082	prpf6	96	92.880	ENSLAFG00000005272	PRPF6	100	92.455	Loxodonta_africana
ENSXCOG00000008082	prpf6	96	92.667	ENSMFAG00000037542	PRPF6	100	92.242	Macaca_fascicularis
ENSXCOG00000008082	prpf6	96	86.412	ENSMMUG00000015558	PRPF6	98	93.934	Macaca_mulatta
ENSXCOG00000008082	prpf6	96	80.191	ENSMNEG00000045555	PRPF6	100	79.767	Macaca_nemestrina
ENSXCOG00000008082	prpf6	100	97.317	ENSMAMG00000010718	prpf6	100	97.317	Mastacembelus_armatus
ENSXCOG00000008082	prpf6	97	97.974	ENSMZEG00005015261	-	100	97.974	Maylandia_zebra
ENSXCOG00000008082	prpf6	90	97.943	ENSMZEG00005026539	prpf6	100	97.943	Maylandia_zebra
ENSXCOG00000008082	prpf6	93	93.566	ENSMGAG00000006634	PRPF6	100	93.239	Meleagris_gallopavo
ENSXCOG00000008082	prpf6	96	93.836	ENSMAUG00000013969	Prpf6	100	93.411	Mesocricetus_auratus
ENSXCOG00000008082	prpf6	84	92.579	ENSMICG00000017793	PRPF6	98	92.602	Microcebus_murinus
ENSXCOG00000008082	prpf6	96	93.730	ENSMOCG00000001701	Prpf6	100	93.305	Microtus_ochrogaster
ENSXCOG00000008082	prpf6	96	97.204	ENSMMOG00000020419	prpf6	100	97.204	Mola_mola
ENSXCOG00000008082	prpf6	93	94.451	ENSMODG00000017051	PRPF6	99	93.958	Monodelphis_domestica
ENSXCOG00000008082	prpf6	95	97.609	ENSMALG00000000089	prpf6	100	97.609	Monopterus_albus
ENSXCOG00000008082	prpf6	96	87.566	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSXCOG00000008082	prpf6	96	93.836	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSXCOG00000008082	prpf6	96	93.836	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSXCOG00000008082	prpf6	96	93.836	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSXCOG00000008082	prpf6	86	93.439	ENSMPUG00000008673	PRPF6	98	93.439	Mustela_putorius_furo
ENSXCOG00000008082	prpf6	96	93.943	ENSNGAG00000003365	Prpf6	100	93.518	Nannospalax_galili
ENSXCOG00000008082	prpf6	100	97.833	ENSNBRG00000015025	prpf6	100	97.833	Neolamprologus_brichardi
ENSXCOG00000008082	prpf6	96	92.667	ENSNLEG00000010208	PRPF6	100	92.242	Nomascus_leucogenys
ENSXCOG00000008082	prpf6	96	84.337	ENSMEUG00000009824	-	90	84.585	Notamacropus_eugenii
ENSXCOG00000008082	prpf6	96	87.885	ENSODEG00000004841	PRPF6	100	87.460	Octodon_degus
ENSXCOG00000008082	prpf6	100	97.730	ENSONIG00000017406	prpf6	100	97.730	Oreochromis_niloticus
ENSXCOG00000008082	prpf6	96	93.624	ENSOANG00000004920	PRPF6	100	93.199	Ornithorhynchus_anatinus
ENSXCOG00000008082	prpf6	95	91.524	ENSOCUG00000014151	PRPF6	100	91.094	Oryctolagus_cuniculus
ENSXCOG00000008082	prpf6	100	96.388	ENSORLG00000009592	prpf6	100	96.388	Oryzias_latipes
ENSXCOG00000008082	prpf6	100	96.491	ENSORLG00020001458	prpf6	100	96.491	Oryzias_latipes_hni
ENSXCOG00000008082	prpf6	100	96.491	ENSORLG00015018762	prpf6	100	96.491	Oryzias_latipes_hsok
ENSXCOG00000008082	prpf6	100	96.801	ENSOMEG00000012174	prpf6	100	96.801	Oryzias_melastigma
ENSXCOG00000008082	prpf6	96	86.518	ENSOGAG00000007573	PRPF6	100	86.093	Otolemur_garnettii
ENSXCOG00000008082	prpf6	96	92.880	ENSOARG00000008776	PRPF6	99	92.455	Ovis_aries
ENSXCOG00000008082	prpf6	96	92.774	ENSPPAG00000008686	PRPF6	100	92.349	Pan_paniscus
ENSXCOG00000008082	prpf6	96	93.411	ENSPPRG00000008497	PRPF6	100	92.986	Panthera_pardus
ENSXCOG00000008082	prpf6	93	93.348	ENSPTIG00000011184	PRPF6	97	92.912	Panthera_tigris_altaica
ENSXCOG00000008082	prpf6	96	92.774	ENSPTRG00000013765	PRPF6	100	92.349	Pan_troglodytes
ENSXCOG00000008082	prpf6	96	92.455	ENSPANG00000024135	PRPF6	100	92.030	Papio_anubis
ENSXCOG00000008082	prpf6	96	95.106	ENSPKIG00000005627	prpf6	99	94.681	Paramormyrops_kingsleyae
ENSXCOG00000008082	prpf6	90	93.311	ENSPSIG00000007717	PRPF6	100	92.857	Pelodiscus_sinensis
ENSXCOG00000008082	prpf6	99	94.628	ENSPMGG00000008925	prpf6	99	93.905	Periophthalmus_magnuspinnatus
ENSXCOG00000008082	prpf6	96	93.836	ENSPEMG00000016036	Prpf6	100	93.411	Peromyscus_maniculatus_bairdii
ENSXCOG00000008082	prpf6	98	87.356	ENSPMAG00000006144	prpf6	100	87.987	Petromyzon_marinus
ENSXCOG00000008082	prpf6	96	93.730	ENSPCIG00000017909	PRPF6	100	93.305	Phascolarctos_cinereus
ENSXCOG00000008082	prpf6	100	98.466	ENSPFOG00000006431	prpf6	99	98.466	Poecilia_formosa
ENSXCOG00000008082	prpf6	100	99.278	ENSPLAG00000005974	prpf6	100	99.278	Poecilia_latipinna
ENSXCOG00000008082	prpf6	100	99.690	ENSPMEG00000009977	prpf6	100	99.690	Poecilia_mexicana
ENSXCOG00000008082	prpf6	100	99.174	ENSPREG00000017993	prpf6	95	99.174	Poecilia_reticulata
ENSXCOG00000008082	prpf6	96	92.242	ENSPPYG00000011256	PRPF6	100	91.817	Pongo_abelii
ENSXCOG00000008082	prpf6	91	95.425	ENSPCAG00000006536	PRPF6	88	95.425	Procavia_capensis
ENSXCOG00000008082	prpf6	96	92.986	ENSPCOG00000016881	PRPF6	100	92.561	Propithecus_coquereli
ENSXCOG00000008082	prpf6	96	87.460	ENSPVAG00000014316	PRPF6	100	87.035	Pteropus_vampyrus
ENSXCOG00000008082	prpf6	100	83.778	ENSPNYG00000001939	prpf6	100	83.778	Pundamilia_nyererei
ENSXCOG00000008082	prpf6	97	95.445	ENSPNAG00000015606	prpf6	100	93.545	Pygocentrus_nattereri
ENSXCOG00000008082	prpf6	96	93.730	ENSRNOG00000051498	Prpf6	100	93.305	Rattus_norvegicus
ENSXCOG00000008082	prpf6	96	92.667	ENSRBIG00000043613	PRPF6	100	92.242	Rhinopithecus_bieti
ENSXCOG00000008082	prpf6	96	89.630	ENSRROG00000040969	PRPF6	98	92.561	Rhinopithecus_roxellana
ENSXCOG00000008082	prpf6	87	90.088	ENSSBOG00000020632	PRPF6	93	87.889	Saimiri_boliviensis_boliviensis
ENSXCOG00000008082	prpf6	96	93.730	ENSSHAG00000016810	PRPF6	100	93.305	Sarcophilus_harrisii
ENSXCOG00000008082	prpf6	95	95.054	ENSSFOG00015020859	prpf6	100	94.624	Scleropages_formosus
ENSXCOG00000008082	prpf6	100	95.975	ENSSMAG00000008112	prpf6	100	95.975	Scophthalmus_maximus
ENSXCOG00000008082	prpf6	100	97.214	ENSSDUG00000016142	prpf6	100	97.214	Seriola_dumerili
ENSXCOG00000008082	prpf6	100	97.214	ENSSLDG00000025283	prpf6	99	97.214	Seriola_lalandi_dorsalis
ENSXCOG00000008082	prpf6	90	92.281	ENSSPUG00000018260	PRPF6	100	91.827	Sphenodon_punctatus
ENSXCOG00000008082	prpf6	100	97.317	ENSSPAG00000015850	prpf6	100	97.317	Stegastes_partitus
ENSXCOG00000008082	prpf6	97	91.937	ENSSSCG00000029119	PRPF6	98	92.841	Sus_scrofa
ENSXCOG00000008082	prpf6	96	93.432	ENSTGUG00000007221	PRPF6	100	93.114	Taeniopygia_guttata
ENSXCOG00000008082	prpf6	100	96.388	ENSTRUG00000002920	prpf6	100	96.388	Takifugu_rubripes
ENSXCOG00000008082	prpf6	96	90.223	ENSTNIG00000017873	prpf6	100	90.223	Tetraodon_nigroviridis
ENSXCOG00000008082	prpf6	85	94.444	ENSTBEG00000005348	PRPF6	85	92.222	Tupaia_belangeri
ENSXCOG00000008082	prpf6	96	93.092	ENSTTRG00000013068	PRPF6	100	92.667	Tursiops_truncatus
ENSXCOG00000008082	prpf6	98	88.866	ENSUMAG00000021631	PRPF6	98	91.413	Ursus_maritimus
ENSXCOG00000008082	prpf6	96	93.411	ENSVVUG00000014948	PRPF6	100	92.986	Vulpes_vulpes
ENSXCOG00000008082	prpf6	96	92.872	ENSXETG00000012054	prpf6	97	92.447	Xenopus_tropicalis
ENSXCOG00000008082	prpf6	100	99.897	ENSXMAG00000015581	prpf6	100	99.897	Xiphophorus_maculatus