EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008115 (Gene tree)
Gene ID: -
Gene Symbol: YTHDF1
Alias: C20orf21|FLJ20391
Full Name: YTH N6-methyladenosine RNA binding protein 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6289 bases
Position: chrKQ557201.1:16924444-16930732
Accession: 15867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000010748	YTH	PF04146.15	5.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000010872	YTHDF1-201	1815	-	ENSXCOP00000010748	604 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008115	YTHDF1	96	58.940	ENSXCOG00000004960	ythdf2	97	60.100
ENSXCOG00000008115	YTHDF1	96	75.421	ENSXCOG00000002490	ythdf1	95	76.370
ENSXCOG00000008115	YTHDF1	96	62.226	ENSXCOG00000009687	ythdf3	96	61.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008115	YTHDF1	94	71.728	ENSG00000149658	YTHDF1	97	70.413	Homo_sapiens
ENSXCOG00000008115	YTHDF1	99	78.347	ENSAPOG00000004358	ythdf1	99	76.724	Acanthochromis_polyacanthus
ENSXCOG00000008115	YTHDF1	99	96.352	ENSAPOG00000010796	YTHDF1	98	96.352	Acanthochromis_polyacanthus
ENSXCOG00000008115	YTHDF1	94	74.010	ENSACIG00000011264	ythdf1	97	74.372	Amphilophus_citrinellus
ENSXCOG00000008115	YTHDF1	94	75.952	ENSACIG00000020083	YTHDF1	97	87.022	Amphilophus_citrinellus
ENSXCOG00000008115	YTHDF1	99	77.961	ENSAOCG00000022251	ythdf1	96	78.061	Amphiprion_ocellaris
ENSXCOG00000008115	YTHDF1	99	96.020	ENSAOCG00000012567	YTHDF1	98	96.020	Amphiprion_ocellaris
ENSXCOG00000008115	YTHDF1	99	96.186	ENSAPEG00000008750	YTHDF1	98	96.186	Amphiprion_percula
ENSXCOG00000008115	YTHDF1	99	77.961	ENSAPEG00000021878	ythdf1	96	77.723	Amphiprion_percula
ENSXCOG00000008115	YTHDF1	99	95.033	ENSATEG00000005996	YTHDF1	98	95.861	Anabas_testudineus
ENSXCOG00000008115	YTHDF1	99	77.483	ENSATEG00000023840	ythdf1	98	76.034	Anabas_testudineus
ENSXCOG00000008115	YTHDF1	94	72.426	ENSAPLG00000005985	YTHDF1	97	72.185	Anas_platyrhynchos
ENSXCOG00000008115	YTHDF1	94	73.252	ENSACAG00000005560	YTHDF1	97	72.682	Anolis_carolinensis
ENSXCOG00000008115	YTHDF1	94	71.379	ENSANAG00000034786	-	100	70.351	Aotus_nancymaae
ENSXCOG00000008115	YTHDF1	99	58.070	ENSANAG00000021022	-	97	59.603	Aotus_nancymaae
ENSXCOG00000008115	YTHDF1	99	93.709	ENSACLG00000025518	YTHDF1	98	93.874	Astatotilapia_calliptera
ENSXCOG00000008115	YTHDF1	94	71.705	ENSBTAG00000010383	YTHDF1	100	69.002	Bos_taurus
ENSXCOG00000008115	YTHDF1	94	71.379	ENSCJAG00000010056	YTHDF1	97	70.481	Callithrix_jacchus
ENSXCOG00000008115	YTHDF1	94	70.228	ENSCHIG00000026494	YTHDF1	98	69.371	Capra_hircus
ENSXCOG00000008115	YTHDF1	94	70.979	ENSTSYG00000033436	YTHDF1	97	71.144	Carlito_syrichta
ENSXCOG00000008115	YTHDF1	94	72.077	ENSCATG00000033272	YTHDF1	97	71.144	Cercocebus_atys
ENSXCOG00000008115	YTHDF1	96	71.355	ENSCLAG00000005989	YTHDF1	98	70.181	Chinchilla_lanigera
ENSXCOG00000008115	YTHDF1	94	72.077	ENSCSAG00000016266	YTHDF1	97	71.144	Chlorocebus_sabaeus
ENSXCOG00000008115	YTHDF1	94	72.917	ENSCPBG00000027183	YTHDF1	97	71.854	Chrysemys_picta_bellii
ENSXCOG00000008115	YTHDF1	94	71.902	ENSCANG00000029082	YTHDF1	97	70.978	Colobus_angolensis_palliatus
ENSXCOG00000008115	YTHDF1	96	71.527	ENSCGRG00001016568	Ythdf1	97	71.476	Cricetulus_griseus_chok1gshd
ENSXCOG00000008115	YTHDF1	94	71.678	ENSCGRG00000009207	Ythdf1	99	71.476	Cricetulus_griseus_crigri
ENSXCOG00000008115	YTHDF1	94	76.708	ENSCSEG00000020623	YTHDF1	97	76.027	Cynoglossus_semilaevis
ENSXCOG00000008115	YTHDF1	99	75.083	ENSCVAG00000017940	ythdf1	97	75.820	Cyprinodon_variegatus
ENSXCOG00000008115	YTHDF1	99	97.015	ENSCVAG00000014378	YTHDF1	98	97.015	Cyprinodon_variegatus
ENSXCOG00000008115	YTHDF1	99	80.265	ENSDARG00000016447	ythdf1	97	80.161	Danio_rerio
ENSXCOG00000008115	YTHDF1	94	71.329	ENSDNOG00000043590	YTHDF1	97	71.642	Dasypus_novemcinctus
ENSXCOG00000008115	YTHDF1	79	53.012	ENSETEG00000017860	-	96	53.012	Echinops_telfairi
ENSXCOG00000008115	YTHDF1	96	69.297	ENSEASG00005023186	YTHDF1	97	71.096	Equus_asinus_asinus
ENSXCOG00000008115	YTHDF1	95	69.550	ENSECAG00000019475	YTHDF1	100	70.351	Equus_caballus
ENSXCOG00000008115	YTHDF1	90	71.009	ENSEEUG00000007461	YTHDF1	100	70.121	Erinaceus_europaeus
ENSXCOG00000008115	YTHDF1	99	80.349	ENSELUG00000001906	YTHDF1	99	77.513	Esox_lucius
ENSXCOG00000008115	YTHDF1	99	80.032	ENSELUG00000022768	ythdf1	96	79.967	Esox_lucius
ENSXCOG00000008115	YTHDF1	94	72.775	ENSFALG00000010463	YTHDF1	97	71.689	Ficedula_albicollis
ENSXCOG00000008115	YTHDF1	97	69.728	ENSFDAG00000019602	YTHDF1	97	69.307	Fukomys_damarensis
ENSXCOG00000008115	YTHDF1	99	95.199	ENSFHEG00000002540	YTHDF1	98	96.026	Fundulus_heteroclitus
ENSXCOG00000008115	YTHDF1	99	76.246	ENSFHEG00000023218	ythdf1	98	74.576	Fundulus_heteroclitus
ENSXCOG00000008115	YTHDF1	88	90.187	ENSGMOG00000019610	ythdf1	83	90.187	Gadus_morhua
ENSXCOG00000008115	YTHDF1	94	72.600	ENSGALG00000005745	YTHDF1	100	71.804	Gallus_gallus
ENSXCOG00000008115	YTHDF1	99	98.507	ENSGAFG00000021100	YTHDF1	98	98.507	Gambusia_affinis
ENSXCOG00000008115	YTHDF1	99	77.063	ENSGACG00000012014	ythdf1	97	75.908	Gasterosteus_aculeatus
ENSXCOG00000008115	YTHDF1	99	86.371	ENSGACG00000002613	YTHDF1	98	87.356	Gasterosteus_aculeatus
ENSXCOG00000008115	YTHDF1	94	73.345	ENSGAGG00000003007	YTHDF1	97	71.854	Gopherus_agassizii
ENSXCOG00000008115	YTHDF1	96	71.993	ENSGGOG00000008340	YTHDF1	97	70.744	Gorilla_gorilla
ENSXCOG00000008115	YTHDF1	99	93.543	ENSHBUG00000004875	YTHDF1	98	94.371	Haplochromis_burtoni
ENSXCOG00000008115	YTHDF1	99	77.265	ENSHBUG00000011284	ythdf1	98	76.461	Haplochromis_burtoni
ENSXCOG00000008115	YTHDF1	94	70.228	ENSHGLG00000006585	YTHDF1	97	69.193	Heterocephalus_glaber_female
ENSXCOG00000008115	YTHDF1	94	70.228	ENSHGLG00100004683	YTHDF1	97	69.193	Heterocephalus_glaber_male
ENSXCOG00000008115	YTHDF1	99	87.336	ENSHCOG00000011303	YTHDF1	98	87.336	Hippocampus_comes
ENSXCOG00000008115	YTHDF1	96	76.897	ENSHCOG00000008866	ythdf1	96	76.451	Hippocampus_comes
ENSXCOG00000008115	YTHDF1	99	80.363	ENSIPUG00000000425	Ythdf1	97	78.947	Ictalurus_punctatus
ENSXCOG00000008115	YTHDF1	96	71.698	ENSJJAG00000013589	Ythdf1	98	72.556	Jaculus_jaculus
ENSXCOG00000008115	YTHDF1	99	94.215	ENSKMAG00000017472	YTHDF1	98	95.041	Kryptolebias_marmoratus
ENSXCOG00000008115	YTHDF1	99	77.409	ENSKMAG00000005595	ythdf1	97	76.329	Kryptolebias_marmoratus
ENSXCOG00000008115	YTHDF1	99	77.076	ENSLBEG00000014105	ythdf1	96	77.049	Labrus_bergylta
ENSXCOG00000008115	YTHDF1	99	92.703	ENSLBEG00000012068	YTHDF1	98	92.703	Labrus_bergylta
ENSXCOG00000008115	YTHDF1	96	71.945	ENSLACG00000014195	YTHDF1	98	72.337	Latimeria_chalumnae
ENSXCOG00000008115	YTHDF1	99	77.190	ENSLOCG00000005020	ythdf1	97	76.694	Lepisosteus_oculatus
ENSXCOG00000008115	YTHDF1	94	72.648	ENSLAFG00000008884	YTHDF1	97	70.861	Loxodonta_africana
ENSXCOG00000008115	YTHDF1	94	72.077	ENSMFAG00000042868	YTHDF1	97	71.144	Macaca_fascicularis
ENSXCOG00000008115	YTHDF1	96	72.165	ENSMMUG00000009227	YTHDF1	97	71.144	Macaca_mulatta
ENSXCOG00000008115	YTHDF1	94	72.077	ENSMNEG00000030851	YTHDF1	97	71.144	Macaca_nemestrina
ENSXCOG00000008115	YTHDF1	96	72.289	ENSMLEG00000009252	YTHDF1	99	71.144	Mandrillus_leucophaeus
ENSXCOG00000008115	YTHDF1	99	75.828	ENSMAMG00000024255	ythdf1	97	72.259	Mastacembelus_armatus
ENSXCOG00000008115	YTHDF1	99	94.040	ENSMAMG00000011072	YTHDF1	98	94.868	Mastacembelus_armatus
ENSXCOG00000008115	YTHDF1	99	93.543	ENSMZEG00005023596	YTHDF1	98	94.371	Maylandia_zebra
ENSXCOG00000008115	YTHDF1	99	77.265	ENSMZEG00005026397	ythdf1	98	77.015	Maylandia_zebra
ENSXCOG00000008115	YTHDF1	94	72.600	ENSMGAG00000006139	YTHDF1	97	72.351	Meleagris_gallopavo
ENSXCOG00000008115	YTHDF1	96	71.404	ENSMAUG00000017660	Ythdf1	98	72.432	Mesocricetus_auratus
ENSXCOG00000008115	YTHDF1	94	71.030	ENSMICG00000032266	YTHDF1	97	70.315	Microcebus_murinus
ENSXCOG00000008115	YTHDF1	94	71.154	ENSMOCG00000013573	Ythdf1	97	70.978	Microtus_ochrogaster
ENSXCOG00000008115	YTHDF1	94	76.655	ENSMMOG00000017500	ythdf1	96	74.503	Mola_mola
ENSXCOG00000008115	YTHDF1	99	91.987	ENSMMOG00000020467	YTHDF1	96	92.821	Mola_mola
ENSXCOG00000008115	YTHDF1	89	72.119	ENSMODG00000016842	YTHDF1	100	70.979	Monodelphis_domestica
ENSXCOG00000008115	YTHDF1	99	91.749	ENSMALG00000022209	YTHDF1	98	91.297	Monopterus_albus
ENSXCOG00000008115	YTHDF1	99	77.025	ENSMALG00000015672	ythdf1	97	75.084	Monopterus_albus
ENSXCOG00000008115	YTHDF1	94	71.154	MGP_CAROLIEiJ_G0024790	Ythdf1	97	70.978	Mus_caroli
ENSXCOG00000008115	YTHDF1	94	71.154	ENSMUSG00000038848	Ythdf1	97	70.978	Mus_musculus
ENSXCOG00000008115	YTHDF1	94	71.154	MGP_PahariEiJ_G0026237	Ythdf1	97	70.978	Mus_pahari
ENSXCOG00000008115	YTHDF1	94	71.154	MGP_SPRETEiJ_G0025715	Ythdf1	97	70.978	Mus_spretus
ENSXCOG00000008115	YTHDF1	89	67.412	ENSMPUG00000008111	YTHDF1	100	66.495	Mustela_putorius_furo
ENSXCOG00000008115	YTHDF1	95	71.503	ENSMLUG00000002241	YTHDF1	97	69.522	Myotis_lucifugus
ENSXCOG00000008115	YTHDF1	94	71.902	ENSNGAG00000000334	Ythdf1	97	71.310	Nannospalax_galili
ENSXCOG00000008115	YTHDF1	94	77.604	ENSNBRG00000008213	ythdf1	95	76.975	Neolamprologus_brichardi
ENSXCOG00000008115	YTHDF1	94	94.180	ENSNBRG00000015321	YTHDF1	98	94.310	Neolamprologus_brichardi
ENSXCOG00000008115	YTHDF1	95	64.138	ENSOPRG00000001758	-	99	64.940	Ochotona_princeps
ENSXCOG00000008115	YTHDF1	94	56.261	ENSODEG00000000074	-	97	58.209	Octodon_degus
ENSXCOG00000008115	YTHDF1	99	68.729	ENSODEG00000004380	-	97	69.802	Octodon_degus
ENSXCOG00000008115	YTHDF1	94	77.604	ENSONIG00000016799	ythdf1	98	76.541	Oreochromis_niloticus
ENSXCOG00000008115	YTHDF1	94	72.696	ENSOANG00000003723	YTHDF1	97	72.158	Ornithorhynchus_anatinus
ENSXCOG00000008115	YTHDF1	74	86.486	ENSOCUG00000012780	YTHDF1	96	65.116	Oryctolagus_cuniculus
ENSXCOG00000008115	YTHDF1	99	89.884	ENSORLG00000009739	YTHDF1	98	91.556	Oryzias_latipes
ENSXCOG00000008115	YTHDF1	99	76.159	ENSORLG00000014665	YTHDF1	96	73.409	Oryzias_latipes
ENSXCOG00000008115	YTHDF1	99	89.386	ENSORLG00020001332	YTHDF1	98	91.060	Oryzias_latipes_hni
ENSXCOG00000008115	YTHDF1	99	76.490	ENSORLG00020000307	ythdf1	96	73.736	Oryzias_latipes_hni
ENSXCOG00000008115	YTHDF1	99	89.552	ENSORLG00015018321	YTHDF1	98	91.225	Oryzias_latipes_hsok
ENSXCOG00000008115	YTHDF1	99	76.325	ENSORLG00015006302	ythdf1	96	73.573	Oryzias_latipes_hsok
ENSXCOG00000008115	YTHDF1	99	91.708	ENSOMEG00000011843	YTHDF1	98	91.708	Oryzias_melastigma
ENSXCOG00000008115	YTHDF1	99	76.949	ENSOMEG00000002941	YTHDF1	96	75.779	Oryzias_melastigma
ENSXCOG00000008115	YTHDF1	94	69.930	ENSOGAG00000000480	YTHDF1	97	69.421	Otolemur_garnettii
ENSXCOG00000008115	YTHDF1	96	71.993	ENSPPAG00000023277	YTHDF1	98	70.744	Pan_paniscus
ENSXCOG00000008115	YTHDF1	78	79.913	ENSPTIG00000017355	YTHDF1	95	77.733	Panthera_tigris_altaica
ENSXCOG00000008115	YTHDF1	96	71.993	ENSPTRG00000013730	YTHDF1	97	70.744	Pan_troglodytes
ENSXCOG00000008115	YTHDF1	94	72.077	ENSPANG00000021472	YTHDF1	97	71.144	Papio_anubis
ENSXCOG00000008115	YTHDF1	96	73.070	ENSPKIG00000005026	YTHDF1	97	71.356	Paramormyrops_kingsleyae
ENSXCOG00000008115	YTHDF1	96	71.918	ENSPSIG00000005529	YTHDF1	96	73.116	Pelodiscus_sinensis
ENSXCOG00000008115	YTHDF1	94	77.312	ENSPMGG00000015328	ythdf1	98	77.265	Periophthalmus_magnuspinnatus
ENSXCOG00000008115	YTHDF1	100	91.901	ENSPMGG00000009101	YTHDF1	100	91.901	Periophthalmus_magnuspinnatus
ENSXCOG00000008115	YTHDF1	96	71.897	ENSPEMG00000020199	Ythdf1	99	71.307	Peromyscus_maniculatus_bairdii
ENSXCOG00000008115	YTHDF1	96	73.196	ENSPCIG00000017170	YTHDF1	100	71.678	Phascolarctos_cinereus
ENSXCOG00000008115	YTHDF1	99	76.617	ENSPFOG00000005405	ythdf1	96	75.833	Poecilia_formosa
ENSXCOG00000008115	YTHDF1	99	98.342	ENSPLAG00000006298	YTHDF1	98	98.342	Poecilia_latipinna
ENSXCOG00000008115	YTHDF1	99	76.617	ENSPLAG00000006653	ythdf1	97	76.158	Poecilia_latipinna
ENSXCOG00000008115	YTHDF1	99	75.123	ENSPMEG00000023753	ythdf1	97	76.541	Poecilia_mexicana
ENSXCOG00000008115	YTHDF1	99	98.507	ENSPMEG00000020969	-	98	98.507	Poecilia_mexicana
ENSXCOG00000008115	YTHDF1	99	75.738	ENSPREG00000002173	ythdf1	97	76.844	Poecilia_reticulata
ENSXCOG00000008115	YTHDF1	99	98.336	ENSPREG00000017662	YTHDF1	98	98.336	Poecilia_reticulata
ENSXCOG00000008115	YTHDF1	79	87.179	ENSPPYG00000011226	YTHDF1	98	83.871	Pongo_abelii
ENSXCOG00000008115	YTHDF1	89	69.061	ENSPCAG00000002452	YTHDF1	100	69.009	Procavia_capensis
ENSXCOG00000008115	YTHDF1	94	71.329	ENSPCOG00000025969	YTHDF1	97	70.098	Propithecus_coquereli
ENSXCOG00000008115	YTHDF1	99	93.543	ENSPNYG00000002266	YTHDF1	98	94.371	Pundamilia_nyererei
ENSXCOG00000008115	YTHDF1	99	77.063	ENSPNYG00000014007	ythdf1	97	77.381	Pundamilia_nyererei
ENSXCOG00000008115	YTHDF1	94	70.804	ENSRNOG00000027015	Ythdf1	97	70.978	Rattus_norvegicus
ENSXCOG00000008115	YTHDF1	94	71.204	ENSRBIG00000044959	YTHDF1	97	70.647	Rhinopithecus_bieti
ENSXCOG00000008115	YTHDF1	94	71.204	ENSRROG00000033014	YTHDF1	97	70.647	Rhinopithecus_roxellana
ENSXCOG00000008115	YTHDF1	95	69.723	ENSSBOG00000027278	YTHDF1	100	69.177	Saimiri_boliviensis_boliviensis
ENSXCOG00000008115	YTHDF1	94	73.205	ENSSHAG00000010430	YTHDF1	87	72.231	Sarcophilus_harrisii
ENSXCOG00000008115	YTHDF1	99	77.537	ENSSFOG00015000284	ythdf1	98	77.467	Scleropages_formosus
ENSXCOG00000008115	YTHDF1	68	91.083	ENSSMAG00000013715	ythdf1	90	85.556	Scophthalmus_maximus
ENSXCOG00000008115	YTHDF1	99	89.782	ENSSMAG00000007635	YTHDF1	96	89.782	Scophthalmus_maximus
ENSXCOG00000008115	YTHDF1	99	91.613	ENSSDUG00000015823	YTHDF1	98	91.613	Seriola_dumerili
ENSXCOG00000008115	YTHDF1	99	78.311	ENSSDUG00000000435	ythdf1	96	77.265	Seriola_dumerili
ENSXCOG00000008115	YTHDF1	99	92.020	ENSSLDG00000001054	YTHDF1	98	92.182	Seriola_lalandi_dorsalis
ENSXCOG00000008115	YTHDF1	99	78.275	ENSSLDG00000024948	ythdf1	97	76.221	Seriola_lalandi_dorsalis
ENSXCOG00000008115	YTHDF1	89	71.058	ENSSPUG00000015143	YTHDF1	100	71.181	Sphenodon_punctatus
ENSXCOG00000008115	YTHDF1	99	95.530	ENSSPAG00000003666	YTHDF1	98	95.530	Stegastes_partitus
ENSXCOG00000008115	YTHDF1	99	76.885	ENSSPAG00000014989	ythdf1	96	77.087	Stegastes_partitus
ENSXCOG00000008115	YTHDF1	94	72.775	ENSTGUG00000007565	YTHDF1	98	71.689	Taeniopygia_guttata
ENSXCOG00000008115	YTHDF1	94	77.018	ENSTRUG00000004288	ythdf1	96	76.441	Takifugu_rubripes
ENSXCOG00000008115	YTHDF1	94	91.243	ENSTRUG00000005049	YTHDF1	98	91.312	Takifugu_rubripes
ENSXCOG00000008115	YTHDF1	94	74.035	ENSTNIG00000012490	ythdf1	95	74.310	Tetraodon_nigroviridis
ENSXCOG00000008115	YTHDF1	94	82.746	ENSTNIG00000003975	YTHDF1	97	80.763	Tetraodon_nigroviridis
ENSXCOG00000008115	YTHDF1	96	73.413	ENSXETG00000027086	ythdf1	96	72.973	Xenopus_tropicalis
ENSXCOG00000008115	YTHDF1	99	77.167	ENSXMAG00000008525	ythdf1	99	76.265	Xiphophorus_maculatus
ENSXCOG00000008115	YTHDF1	99	99.005	ENSXMAG00000015644	YTHDF1	98	99.005	Xiphophorus_maculatus