EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000008271 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 44127 bases
Position: chrKQ557224.1:28837765-28881891
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000010954	RRM_1	PF00076.22	8.7e-26	1	2
ENSXCOP00000010954	RRM_1	PF00076.22	8.7e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011079	-	948	-	ENSXCOP00000010954	315 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008271's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008271	-	89	93.214	ENSACIG00000012229	-	94	92.857	Amphilophus_citrinellus
ENSXCOG00000008271	-	89	87.633	ENSAOCG00000010129	-	98	87.279	Amphiprion_ocellaris
ENSXCOG00000008271	-	89	87.633	ENSAPEG00000010843	-	98	87.279	Amphiprion_percula
ENSXCOG00000008271	-	92	90.722	ENSATEG00000019679	raver2	99	90.378	Anabas_testudineus
ENSXCOG00000008271	-	57	62.983	ENSCAPG00000013527	RAVER2	51	62.983	Cavia_aperea
ENSXCOG00000008271	-	58	68.132	ENSCGRG00000011814	-	58	68.132	Cricetulus_griseus_crigri
ENSXCOG00000008271	-	87	92.000	ENSCSEG00000017839	raver2	89	92.000	Cynoglossus_semilaevis
ENSXCOG00000008271	-	76	96.218	ENSCVAG00000002687	raver2	55	96.218	Cyprinodon_variegatus
ENSXCOG00000008271	-	88	76.173	ENSELUG00000022384	raver2	97	76.173	Esox_lucius
ENSXCOG00000008271	-	57	67.956	ENSHGLG00100006640	RAVER2	52	67.956	Heterocephalus_glaber_male
ENSXCOG00000008271	-	69	68.203	ENSSTOG00000009844	RAVER2	57	68.203	Ictidomys_tridecemlineatus
ENSXCOG00000008271	-	75	92.373	ENSKMAG00000011656	raver2	84	83.582	Kryptolebias_marmoratus
ENSXCOG00000008271	-	82	85.992	ENSLBEG00000003778	raver2	81	85.992	Labrus_bergylta
ENSXCOG00000008271	-	75	92.405	ENSMAMG00000009059	raver2	50	95.575	Mastacembelus_armatus
ENSXCOG00000008271	-	57	96.133	ENSMMOG00000006006	-	65	96.133	Mola_mola
ENSXCOG00000008271	-	74	65.517	MGP_PahariEiJ_G0028539	Raver2	50	66.228	Mus_pahari
ENSXCOG00000008271	-	87	93.455	ENSNBRG00000014345	-	92	93.091	Neolamprologus_brichardi
ENSXCOG00000008271	-	88	88.256	ENSORLG00015000191	raver2	67	88.968	Oryzias_latipes_hsok
ENSXCOG00000008271	-	71	79.018	ENSPKIG00000013925	raver2	54	78.603	Paramormyrops_kingsleyae
ENSXCOG00000008271	-	62	77.551	ENSPMGG00000017781	raver2	50	77.551	Periophthalmus_magnuspinnatus
ENSXCOG00000008271	-	69	66.820	ENSPPYG00000001271	-	52	67.130	Pongo_abelii
ENSXCOG00000008271	-	87	93.091	ENSPNYG00000013943	-	92	92.727	Pundamilia_nyererei
ENSXCOG00000008271	-	87	77.091	ENSPNAG00000000962	raver2	85	76.000	Pygocentrus_nattereri
ENSXCOG00000008271	-	75	76.596	ENSSFOG00015001335	raver2	51	78.319	Scleropages_formosus
ENSXCOG00000008271	-	87	94.909	ENSSPAG00000004134	raver2	86	94.545	Stegastes_partitus
ENSXCOG00000008271	-	72	57.456	ENSSSCG00000037672	-	52	57.456	Sus_scrofa