EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000008275 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5987 bases
Position: chrKQ557225.1:22914608-22920594
Accession: ZDB-GENE-030131-9686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000010957	SLBP_RNA_bind	PF15247.6	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011082	-	777	-	ENSXCOP00000010957	258 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008275	slbp	77	58.824	ENSG00000163950	SLBP	80	55.128	Homo_sapiens
ENSXCOG00000008275	slbp	100	72.556	ENSAPOG00000004953	slbp	94	72.556	Acanthochromis_polyacanthus
ENSXCOG00000008275	slbp	57	66.225	ENSAMEG00000016915	SLBP	75	61.176	Ailuropoda_melanoleuca
ENSXCOG00000008275	slbp	87	77.729	ENSACIG00000022308	slbp	88	77.729	Amphilophus_citrinellus
ENSXCOG00000008275	slbp	100	71.053	ENSAOCG00000024545	slbp	94	71.053	Amphiprion_ocellaris
ENSXCOG00000008275	slbp	100	71.053	ENSAPEG00000017629	slbp	94	71.053	Amphiprion_percula
ENSXCOG00000008275	slbp	100	73.034	ENSATEG00000016358	slbp	94	73.034	Anabas_testudineus
ENSXCOG00000008275	slbp	64	55.030	ENSAPLG00000015989	-	76	58.580	Anas_platyrhynchos
ENSXCOG00000008275	slbp	77	55.714	ENSANAG00000034769	SLBP	68	62.941	Aotus_nancymaae
ENSXCOG00000008275	slbp	93	72.691	ENSACLG00000007036	-	89	72.691	Astatotilapia_calliptera
ENSXCOG00000008275	slbp	99	56.716	ENSAMXG00000014527	slbp	93	57.414	Astyanax_mexicanus
ENSXCOG00000008275	slbp	85	53.304	ENSBTAG00000001328	SLBP	80	52.361	Bos_taurus
ENSXCOG00000008275	slbp	77	57.143	ENSCJAG00000001790	SLBP	72	54.930	Callithrix_jacchus
ENSXCOG00000008275	slbp	76	55.825	ENSCAFG00000015016	SLBP	71	55.981	Canis_familiaris
ENSXCOG00000008275	slbp	76	55.825	ENSCAFG00020012334	SLBP	71	55.981	Canis_lupus_dingo
ENSXCOG00000008275	slbp	85	53.275	ENSCHIG00000019364	SLBP	80	52.766	Capra_hircus
ENSXCOG00000008275	slbp	64	62.722	ENSTSYG00000000376	SLBP	68	62.353	Carlito_syrichta
ENSXCOG00000008275	slbp	58	64.516	ENSCPOG00000000031	SLBP	71	53.271	Cavia_porcellus
ENSXCOG00000008275	slbp	77	58.824	ENSCATG00000029173	SLBP	68	62.941	Cercocebus_atys
ENSXCOG00000008275	slbp	58	66.667	ENSCLAG00000008157	SLBP	73	57.212	Chinchilla_lanigera
ENSXCOG00000008275	slbp	69	48.333	ENSCSAG00000015628	SLBP	61	48.087	Chlorocebus_sabaeus
ENSXCOG00000008275	slbp	78	57.143	ENSCPBG00000000746	SLBP	73	57.143	Chrysemys_picta_bellii
ENSXCOG00000008275	slbp	63	63.253	ENSCANG00000041008	SLBP	74	62.130	Colobus_angolensis_palliatus
ENSXCOG00000008275	slbp	85	54.464	ENSCGRG00001009760	-	76	54.185	Cricetulus_griseus_chok1gshd
ENSXCOG00000008275	slbp	83	53.182	ENSCGRG00001012991	-	77	52.915	Cricetulus_griseus_chok1gshd
ENSXCOG00000008275	slbp	85	54.464	ENSCGRG00000004506	Slbp	76	54.185	Cricetulus_griseus_crigri
ENSXCOG00000008275	slbp	97	69.685	ENSCSEG00000020337	-	95	68.321	Cynoglossus_semilaevis
ENSXCOG00000008275	slbp	95	77.470	ENSCVAG00000019592	-	92	79.200	Cyprinodon_variegatus
ENSXCOG00000008275	slbp	90	59.091	ENSDARG00000100558	slbp	77	59.917	Danio_rerio
ENSXCOG00000008275	slbp	76	55.981	ENSDNOG00000047539	SLBP	79	53.913	Dasypus_novemcinctus
ENSXCOG00000008275	slbp	66	56.395	ENSDORG00000003028	Slbp	90	64.706	Dipodomys_ordii
ENSXCOG00000008275	slbp	81	51.613	ENSETEG00000004641	SLBP	87	54.673	Echinops_telfairi
ENSXCOG00000008275	slbp	53	60.284	ENSEASG00005022714	SLBP	73	59.722	Equus_asinus_asinus
ENSXCOG00000008275	slbp	71	60.963	ENSECAG00000011689	SLBP	59	60.526	Equus_caballus
ENSXCOG00000008275	slbp	100	56.716	ENSELUG00000012854	slbp	94	56.716	Esox_lucius
ENSXCOG00000008275	slbp	63	57.576	ENSFCAG00000000169	SLBP	69	60.588	Felis_catus
ENSXCOG00000008275	slbp	78	52.582	ENSFALG00000010003	-	74	52.582	Ficedula_albicollis
ENSXCOG00000008275	slbp	72	60.417	ENSFDAG00000007592	SLBP	79	57.416	Fukomys_damarensis
ENSXCOG00000008275	slbp	98	81.102	ENSFHEG00000007497	slbp	92	80.709	Fundulus_heteroclitus
ENSXCOG00000008275	slbp	60	73.248	ENSGMOG00000015352	slbp	100	72.500	Gadus_morhua
ENSXCOG00000008275	slbp	87	53.017	ENSGALG00000015712	SLBP	81	53.017	Gallus_gallus
ENSXCOG00000008275	slbp	100	95.349	ENSGAFG00000019577	slbp	100	95.349	Gambusia_affinis
ENSXCOG00000008275	slbp	76	74.752	ENSGACG00000019596	slbp	82	74.752	Gasterosteus_aculeatus
ENSXCOG00000008275	slbp	78	57.619	ENSGAGG00000012096	SLBP	83	57.619	Gopherus_agassizii
ENSXCOG00000008275	slbp	77	58.824	ENSGGOG00000003167	SLBP	68	62.941	Gorilla_gorilla
ENSXCOG00000008275	slbp	93	73.092	ENSHBUG00000003338	-	89	73.092	Haplochromis_burtoni
ENSXCOG00000008275	slbp	58	57.616	ENSHGLG00000008313	-	73	48.792	Heterocephalus_glaber_female
ENSXCOG00000008275	slbp	58	58.974	ENSHGLG00000010461	-	80	48.387	Heterocephalus_glaber_female
ENSXCOG00000008275	slbp	58	58.974	ENSHGLG00100014906	-	73	51.256	Heterocephalus_glaber_male
ENSXCOG00000008275	slbp	58	58.278	ENSHGLG00100010510	-	73	49.758	Heterocephalus_glaber_male
ENSXCOG00000008275	slbp	71	60.847	ENSHGLG00100014018	-	90	61.579	Heterocephalus_glaber_male
ENSXCOG00000008275	slbp	100	68.340	ENSHCOG00000013425	slbp	94	68.340	Hippocampus_comes
ENSXCOG00000008275	slbp	81	58.796	ENSIPUG00000016780	slbp	85	56.466	Ictalurus_punctatus
ENSXCOG00000008275	slbp	77	55.665	ENSSTOG00000003262	SLBP	73	56.938	Ictidomys_tridecemlineatus
ENSXCOG00000008275	slbp	81	56.398	ENSJJAG00000002394	-	73	55.607	Jaculus_jaculus
ENSXCOG00000008275	slbp	90	47.845	ENSJJAG00000020549	-	72	55.607	Jaculus_jaculus
ENSXCOG00000008275	slbp	98	74.517	ENSKMAG00000008187	slbp	92	74.517	Kryptolebias_marmoratus
ENSXCOG00000008275	slbp	100	68.199	ENSLBEG00000024709	slbp	94	68.199	Labrus_bergylta
ENSXCOG00000008275	slbp	84	51.073	ENSLACG00000014623	SLBP	77	51.754	Latimeria_chalumnae
ENSXCOG00000008275	slbp	88	62.397	ENSLOCG00000011027	slbp	79	62.397	Lepisosteus_oculatus
ENSXCOG00000008275	slbp	79	57.416	ENSLAFG00000012933	SLBP	81	56.604	Loxodonta_africana
ENSXCOG00000008275	slbp	77	58.621	ENSMFAG00000030130	SLBP	63	57.971	Macaca_fascicularis
ENSXCOG00000008275	slbp	77	56.872	ENSMMUG00000032303	SLBP	71	62.941	Macaca_mulatta
ENSXCOG00000008275	slbp	55	52.318	ENSMNEG00000008082	SLBP	64	51.948	Macaca_nemestrina
ENSXCOG00000008275	slbp	72	58.639	ENSMLEG00000024639	SLBP	71	58.247	Mandrillus_leucophaeus
ENSXCOG00000008275	slbp	94	68.651	ENSMAMG00000001046	-	89	68.651	Mastacembelus_armatus
ENSXCOG00000008275	slbp	93	73.092	ENSMZEG00005017261	-	89	73.092	Maylandia_zebra
ENSXCOG00000008275	slbp	64	59.639	ENSMGAG00000013085	SLBP	75	59.639	Meleagris_gallopavo
ENSXCOG00000008275	slbp	84	54.709	ENSMAUG00000009490	Slbp	75	54.425	Mesocricetus_auratus
ENSXCOG00000008275	slbp	64	63.314	ENSMICG00000014244	SLBP	68	62.941	Microcebus_murinus
ENSXCOG00000008275	slbp	81	55.399	ENSMOCG00000015826	Slbp	85	59.686	Microtus_ochrogaster
ENSXCOG00000008275	slbp	72	77.540	ENSMMOG00000010181	slbp	79	77.540	Mola_mola
ENSXCOG00000008275	slbp	76	57.767	ENSMODG00000004304	SLBP	78	57.075	Monodelphis_domestica
ENSXCOG00000008275	slbp	100	69.888	ENSMALG00000013883	-	69	69.663	Monopterus_albus
ENSXCOG00000008275	slbp	81	55.869	MGP_CAROLIEiJ_G0027117	Slbp	82	60.209	Mus_caroli
ENSXCOG00000008275	slbp	81	55.869	ENSMUSG00000004642	Slbp	83	60.209	Mus_musculus
ENSXCOG00000008275	slbp	81	55.869	MGP_PahariEiJ_G0016901	Slbp	82	60.209	Mus_pahari
ENSXCOG00000008275	slbp	81	55.869	MGP_SPRETEiJ_G0028113	Slbp	83	60.209	Mus_spretus
ENSXCOG00000008275	slbp	57	62.667	ENSMLUG00000004425	SLBP	72	53.529	Myotis_lucifugus
ENSXCOG00000008275	slbp	81	54.717	ENSNGAG00000020799	Slbp	72	54.717	Nannospalax_galili
ENSXCOG00000008275	slbp	93	71.825	ENSNBRG00000006044	-	95	71.825	Neolamprologus_brichardi
ENSXCOG00000008275	slbp	77	56.872	ENSNLEG00000000048	SLBP	68	62.941	Nomascus_leucogenys
ENSXCOG00000008275	slbp	56	67.808	ENSMEUG00000002501	SLBP	91	61.538	Notamacropus_eugenii
ENSXCOG00000008275	slbp	58	67.320	ENSODEG00000012641	SLBP	74	57.561	Octodon_degus
ENSXCOG00000008275	slbp	90	73.554	ENSONIG00000017469	-	87	73.554	Oreochromis_niloticus
ENSXCOG00000008275	slbp	66	62.941	ENSOANG00000014243	SLBP	68	62.941	Ornithorhynchus_anatinus
ENSXCOG00000008275	slbp	100	66.409	ENSORLG00000024887	-	94	66.409	Oryzias_latipes
ENSXCOG00000008275	slbp	91	69.492	ENSORLG00020007798	slbp	87	69.492	Oryzias_latipes_hni
ENSXCOG00000008275	slbp	91	69.620	ENSORLG00015016656	slbp	87	69.620	Oryzias_latipes_hsok
ENSXCOG00000008275	slbp	91	68.354	ENSOMEG00000010818	slbp	87	69.198	Oryzias_melastigma
ENSXCOG00000008275	slbp	68	60.894	ENSOGAG00000009750	SLBP	72	56.481	Otolemur_garnettii
ENSXCOG00000008275	slbp	57	66.887	ENSOARG00000016090	SLBP	75	61.176	Ovis_aries
ENSXCOG00000008275	slbp	77	58.333	ENSPPAG00000033300	SLBP	68	62.941	Pan_paniscus
ENSXCOG00000008275	slbp	63	57.576	ENSPPRG00000016897	SLBP	78	56.373	Panthera_pardus
ENSXCOG00000008275	slbp	77	58.128	ENSPTRG00000015832	SLBP	68	62.941	Pan_troglodytes
ENSXCOG00000008275	slbp	77	55.924	ENSPANG00000004932	SLBP	68	62.941	Papio_anubis
ENSXCOG00000008275	slbp	82	64.815	ENSPKIG00000006183	slbp	79	62.393	Paramormyrops_kingsleyae
ENSXCOG00000008275	slbp	86	64.912	ENSPMGG00000017684	-	99	66.332	Periophthalmus_magnuspinnatus
ENSXCOG00000008275	slbp	81	55.399	ENSPEMG00000018369	Slbp	72	55.093	Peromyscus_maniculatus_bairdii
ENSXCOG00000008275	slbp	76	55.607	ENSPCIG00000013575	SLBP	62	55.000	Phascolarctos_cinereus
ENSXCOG00000008275	slbp	98	94.444	ENSPFOG00000000462	slbp	93	94.444	Poecilia_formosa
ENSXCOG00000008275	slbp	98	93.651	ENSPLAG00000008300	slbp	98	91.373	Poecilia_latipinna
ENSXCOG00000008275	slbp	98	94.444	ENSPMEG00000020807	slbp	93	94.444	Poecilia_mexicana
ENSXCOG00000008275	slbp	98	94.841	ENSPREG00000004561	slbp	93	94.841	Poecilia_reticulata
ENSXCOG00000008275	slbp	77	58.824	ENSPPYG00000014529	SLBP	71	58.454	Pongo_abelii
ENSXCOG00000008275	slbp	64	63.314	ENSPCOG00000017399	SLBP	74	57.604	Propithecus_coquereli
ENSXCOG00000008275	slbp	86	51.327	ENSPVAG00000002807	SLBP	79	51.092	Pteropus_vampyrus
ENSXCOG00000008275	slbp	93	73.092	ENSPNYG00000005451	-	89	73.092	Pundamilia_nyererei
ENSXCOG00000008275	slbp	95	58.103	ENSPNAG00000018503	slbp	92	58.103	Pygocentrus_nattereri
ENSXCOG00000008275	slbp	81	55.869	ENSRNOG00000037162	Slbp	72	55.556	Rattus_norvegicus
ENSXCOG00000008275	slbp	77	58.824	ENSRBIG00000039159	SLBP	68	62.941	Rhinopithecus_bieti
ENSXCOG00000008275	slbp	77	58.824	ENSRROG00000030081	SLBP	73	57.971	Rhinopithecus_roxellana
ENSXCOG00000008275	slbp	52	63.309	ENSSBOG00000033897	SLBP	71	61.972	Saimiri_boliviensis_boliviensis
ENSXCOG00000008275	slbp	79	54.260	ENSSHAG00000013939	SLBP	75	53.712	Sarcophilus_harrisii
ENSXCOG00000008275	slbp	89	60.338	ENSSFOG00015019429	slbp	83	60.338	Scleropages_formosus
ENSXCOG00000008275	slbp	91	72.653	ENSSMAG00000016028	-	88	71.146	Scophthalmus_maximus
ENSXCOG00000008275	slbp	100	72.727	ENSSDUG00000000855	-	95	72.727	Seriola_dumerili
ENSXCOG00000008275	slbp	98	53.077	ENSSLDG00000007554	-	83	52.308	Seriola_lalandi_dorsalis
ENSXCOG00000008275	slbp	57	75.817	ENSSLDG00000022893	-	87	78.082	Seriola_lalandi_dorsalis
ENSXCOG00000008275	slbp	78	52.941	ENSSPUG00000016007	SLBP	77	56.731	Sphenodon_punctatus
ENSXCOG00000008275	slbp	100	71.429	ENSSPAG00000004021	slbp	100	72.692	Stegastes_partitus
ENSXCOG00000008275	slbp	80	56.398	ENSSSCG00000008676	SLBP	72	56.075	Sus_scrofa
ENSXCOG00000008275	slbp	78	54.854	ENSTGUG00000010626	-	78	54.854	Taeniopygia_guttata
ENSXCOG00000008275	slbp	100	65.517	ENSTRUG00000000688	slbp	94	66.412	Takifugu_rubripes
ENSXCOG00000008275	slbp	93	65.145	ENSTNIG00000000484	-	94	65.145	Tetraodon_nigroviridis
ENSXCOG00000008275	slbp	76	31.000	ENSTBEG00000004085	SLBP	78	31.034	Tupaia_belangeri
ENSXCOG00000008275	slbp	57	66.667	ENSTTRG00000010901	-	75	61.446	Tursiops_truncatus
ENSXCOG00000008275	slbp	57	62.000	ENSTTRG00000004010	-	91	57.229	Tursiops_truncatus
ENSXCOG00000008275	slbp	71	60.417	ENSUAMG00000012990	SLBP	71	56.311	Ursus_americanus
ENSXCOG00000008275	slbp	76	55.825	ENSVVUG00000015578	-	71	55.981	Vulpes_vulpes
ENSXCOG00000008275	slbp	79	56.938	ENSXETG00000003876	slbp	78	56.938	Xenopus_tropicalis
ENSXCOG00000008275	slbp	98	96.032	ENSXMAG00000001331	-	92	96.032	Xiphophorus_maculatus