EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000008329 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4891 bases
Position: chrKQ557221.1:11483197-11488087
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011024	PRP38	PF03371.15	1.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011151	-	1392	-	ENSXCOP00000011024	463 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008329	-	100	84.086	ENSATEG00000014482	-	100	83.547	Anabas_testudineus
ENSXCOG00000008329	-	60	86.170	ENSAMXG00000039494	-	50	84.880	Astyanax_mexicanus
ENSXCOG00000008329	-	59	84.420	ENSBTAG00000047874	PRPF38B	85	60.780	Bos_taurus
ENSXCOG00000008329	-	58	46.468	WBGene00022434	Y108G3AL.2	61	53.266	Caenorhabditis_elegans
ENSXCOG00000008329	-	98	56.778	ENSCAFG00020010992	-	91	56.778	Canis_lupus_dingo
ENSXCOG00000008329	-	59	84.420	ENSCHIG00000024357	-	85	60.780	Capra_hircus
ENSXCOG00000008329	-	59	84.783	ENSCPOG00000039545	-	82	62.395	Cavia_porcellus
ENSXCOG00000008329	-	59	84.364	ENSCLAG00000005801	-	83	61.157	Chinchilla_lanigera
ENSXCOG00000008329	-	51	73.950	ENSCHOG00000008972	-	97	59.610	Choloepus_hoffmanni
ENSXCOG00000008329	-	100	79.399	ENSCSEG00000015030	-	100	79.744	Cynoglossus_semilaevis
ENSXCOG00000008329	-	59	82.545	ENSETEG00000014690	-	85	67.342	Echinops_telfairi
ENSXCOG00000008329	-	100	65.209	ENSELUG00000010390	-	97	69.290	Esox_lucius
ENSXCOG00000008329	-	100	75.840	ENSGMOG00000012080	-	99	75.630	Gadus_morhua
ENSXCOG00000008329	-	99	60.827	ENSGALG00000001972	-	92	61.315	Gallus_gallus
ENSXCOG00000008329	-	100	98.920	ENSGAFG00000008943	-	100	98.920	Gambusia_affinis
ENSXCOG00000008329	-	99	62.648	ENSGAGG00000001563	-	83	64.271	Gopherus_agassizii
ENSXCOG00000008329	-	59	85.401	ENSHGLG00000016583	PRPF38B	83	61.443	Heterocephalus_glaber_female
ENSXCOG00000008329	-	59	85.401	ENSHGLG00100015525	-	83	61.443	Heterocephalus_glaber_male
ENSXCOG00000008329	-	100	79.140	ENSHCOG00000001071	-	100	79.274	Hippocampus_comes
ENSXCOG00000008329	-	100	82.452	ENSKMAG00000005540	-	100	83.932	Kryptolebias_marmoratus
ENSXCOG00000008329	-	100	59.013	ENSLACG00000015511	-	75	65.865	Latimeria_chalumnae
ENSXCOG00000008329	-	59	84.727	ENSMOCG00000020285	-	82	61.684	Microtus_ochrogaster
ENSXCOG00000008329	-	100	82.479	ENSMMOG00000011639	-	100	82.441	Mola_mola
ENSXCOG00000008329	-	65	80.656	ENSMODG00000002350	-	95	79.153	Monodelphis_domestica
ENSXCOG00000008329	-	100	86.325	ENSMALG00000019479	-	100	83.761	Monopterus_albus
ENSXCOG00000008329	-	100	87.527	ENSONIG00000010129	-	100	84.946	Oreochromis_niloticus
ENSXCOG00000008329	-	86	65.000	ENSOANG00000007343	-	92	61.853	Ornithorhynchus_anatinus
ENSXCOG00000008329	-	100	82.328	ENSORLG00000015621	-	95	98.171	Oryzias_latipes
ENSXCOG00000008329	-	100	82.543	ENSORLG00020016276	-	94	98.171	Oryzias_latipes_hni
ENSXCOG00000008329	-	100	82.328	ENSORLG00015016270	-	100	82.869	Oryzias_latipes_hsok
ENSXCOG00000008329	-	100	83.405	ENSOMEG00000022050	-	97	97.590	Oryzias_melastigma
ENSXCOG00000008329	-	59	85.401	ENSOGAG00000027048	-	82	62.500	Otolemur_garnettii
ENSXCOG00000008329	-	57	86.364	ENSOARG00000018899	-	82	62.069	Ovis_aries
ENSXCOG00000008329	-	90	70.629	ENSPKIG00000004815	-	78	73.618	Paramormyrops_kingsleyae
ENSXCOG00000008329	-	100	66.194	ENSPKIG00000017291	-	84	66.314	Paramormyrops_kingsleyae
ENSXCOG00000008329	-	100	98.488	ENSPFOG00000004025	-	100	98.488	Poecilia_formosa
ENSXCOG00000008329	-	100	98.272	ENSPLAG00000019842	-	100	98.272	Poecilia_latipinna
ENSXCOG00000008329	-	100	98.272	ENSPMEG00000004807	-	97	98.272	Poecilia_mexicana
ENSXCOG00000008329	-	100	97.840	ENSPREG00000015599	-	100	97.840	Poecilia_reticulata
ENSXCOG00000008329	-	60	84.229	ENSPNAG00000017484	-	95	68.519	Pygocentrus_nattereri
ENSXCOG00000008329	-	59	85.036	ENSRNOG00000020438	Prpf38b	84	61.975	Rattus_norvegicus
ENSXCOG00000008329	-	94	67.865	ENSSFOG00015011251	-	85	89.024	Scleropages_formosus
ENSXCOG00000008329	-	100	84.402	ENSSLDG00000023487	-	100	85.501	Seriola_lalandi_dorsalis
ENSXCOG00000008329	-	99	78.879	ENSTRUG00000011765	-	100	81.290	Takifugu_rubripes
ENSXCOG00000008329	-	99	64.819	ENSTNIG00000015299	-	99	67.880	Tetraodon_nigroviridis
ENSXCOG00000008329	-	58	76.580	ENSTBEG00000007504	-	87	56.660	Tupaia_belangeri
ENSXCOG00000008329	-	59	85.401	ENSTTRG00000006479	-	85	60.532	Tursiops_truncatus
ENSXCOG00000008329	-	57	72.453	ENSVPAG00000005541	-	81	54.176	Vicugna_pacos
ENSXCOG00000008329	-	96	58.522	ENSXETG00000005260	prpf38b	77	67.488	Xenopus_tropicalis
ENSXCOG00000008329	-	100	99.352	ENSXMAG00000023831	-	100	99.352	Xiphophorus_maculatus