EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008336 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 16460 bases
Position: chrKQ557224.1:5036138-5052597
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011036	ResIII	PF04851.15	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011163	-	2952	-	ENSXCOP00000011036	983 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008336	chd1l	52	38.095	ENSXCOG00000011170	smarca5	54	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008336	chd1l	85	62.818	ENSG00000131778	CHD1L	99	63.124	Homo_sapiens
ENSXCOG00000008336	chd1l	95	77.847	ENSAPOG00000001539	chd1l	99	80.277	Acanthochromis_polyacanthus
ENSXCOG00000008336	chd1l	86	61.856	ENSAMEG00000017063	CHD1L	97	61.856	Ailuropoda_melanoleuca
ENSXCOG00000008336	chd1l	83	79.157	ENSACIG00000001164	chd1l	99	77.993	Amphilophus_citrinellus
ENSXCOG00000008336	chd1l	98	76.869	ENSAOCG00000014510	chd1l	99	76.280	Amphiprion_ocellaris
ENSXCOG00000008336	chd1l	85	82.388	ENSAPEG00000017573	chd1l	95	82.506	Amphiprion_percula
ENSXCOG00000008336	chd1l	85	82.604	ENSAPEG00000017450	chd1l	95	82.604	Amphiprion_percula
ENSXCOG00000008336	chd1l	98	76.530	ENSATEG00000013058	chd1l	97	76.530	Anabas_testudineus
ENSXCOG00000008336	chd1l	83	61.065	ENSAPLG00000009976	CHD1L	96	60.487	Anas_platyrhynchos
ENSXCOG00000008336	chd1l	83	59.587	ENSACAG00000017686	CHD1L	97	58.896	Anolis_carolinensis
ENSXCOG00000008336	chd1l	85	62.602	ENSANAG00000024347	CHD1L	97	61.503	Aotus_nancymaae
ENSXCOG00000008336	chd1l	93	77.182	ENSACLG00000019304	chd1l	96	77.600	Astatotilapia_calliptera
ENSXCOG00000008336	chd1l	96	60.513	ENSAMXG00000012367	chd1l	96	60.758	Astyanax_mexicanus
ENSXCOG00000008336	chd1l	85	61.938	ENSBTAG00000020831	CHD1L	97	61.416	Bos_taurus
ENSXCOG00000008336	chd1l	85	62.097	ENSCJAG00000002406	CHD1L	97	61.530	Callithrix_jacchus
ENSXCOG00000008336	chd1l	87	58.683	ENSCAFG00000010944	CHD1L	97	58.683	Canis_familiaris
ENSXCOG00000008336	chd1l	88	60.379	ENSCAFG00020020121	CHD1L	98	60.879	Canis_lupus_dingo
ENSXCOG00000008336	chd1l	86	60.959	ENSCHIG00000013871	CHD1L	97	61.187	Capra_hircus
ENSXCOG00000008336	chd1l	83	62.249	ENSTSYG00000003005	CHD1L	99	61.565	Carlito_syrichta
ENSXCOG00000008336	chd1l	85	60.414	ENSCPOG00000009000	CHD1L	98	59.796	Cavia_porcellus
ENSXCOG00000008336	chd1l	85	62.989	ENSCCAG00000036079	CHD1L	97	62.397	Cebus_capucinus
ENSXCOG00000008336	chd1l	85	62.485	ENSCATG00000031044	CHD1L	97	61.872	Cercocebus_atys
ENSXCOG00000008336	chd1l	84	62.937	ENSCLAG00000000880	CHD1L	98	61.775	Chinchilla_lanigera
ENSXCOG00000008336	chd1l	85	62.485	ENSCSAG00000018386	CHD1L	97	61.714	Chlorocebus_sabaeus
ENSXCOG00000008336	chd1l	86	62.887	ENSCPBG00000002600	CHD1L	99	62.108	Chrysemys_picta_bellii
ENSXCOG00000008336	chd1l	85	62.212	ENSCANG00000020239	CHD1L	97	61.714	Colobus_angolensis_palliatus
ENSXCOG00000008336	chd1l	84	62.924	ENSCGRG00001021624	Chd1l	98	62.041	Cricetulus_griseus_chok1gshd
ENSXCOG00000008336	chd1l	82	63.418	ENSCGRG00000007554	Chd1l	99	62.500	Cricetulus_griseus_crigri
ENSXCOG00000008336	chd1l	93	81.981	ENSCVAG00000002595	chd1l	97	81.981	Cyprinodon_variegatus
ENSXCOG00000008336	chd1l	98	65.415	ENSDARG00000015471	chd1l	97	66.271	Danio_rerio
ENSXCOG00000008336	chd1l	86	61.556	ENSDNOG00000019504	CHD1L	97	61.556	Dasypus_novemcinctus
ENSXCOG00000008336	chd1l	87	60.565	ENSDORG00000013555	Chd1l	98	60.565	Dipodomys_ordii
ENSXCOG00000008336	chd1l	80	63.251	ENSETEG00000008445	CHD1L	88	63.251	Echinops_telfairi
ENSXCOG00000008336	chd1l	65	50.187	ENSEBUG00000005791	chd1l	86	50.187	Eptatretus_burgeri
ENSXCOG00000008336	chd1l	86	61.785	ENSEASG00005007364	CHD1L	100	62.667	Equus_asinus_asinus
ENSXCOG00000008336	chd1l	86	61.785	ENSECAG00000008915	CHD1L	100	62.667	Equus_caballus
ENSXCOG00000008336	chd1l	98	56.972	ENSELUG00000016844	chd1l	97	57.470	Esox_lucius
ENSXCOG00000008336	chd1l	85	61.789	ENSFCAG00000007777	CHD1L	97	60.973	Felis_catus
ENSXCOG00000008336	chd1l	86	60.206	ENSFALG00000006087	CHD1L	96	60.436	Ficedula_albicollis
ENSXCOG00000008336	chd1l	83	62.901	ENSFDAG00000012431	CHD1L	99	62.573	Fukomys_damarensis
ENSXCOG00000008336	chd1l	98	82.846	ENSFHEG00000012420	chd1l	98	82.644	Fundulus_heteroclitus
ENSXCOG00000008336	chd1l	86	61.194	ENSGALG00000015038	CHD1L	96	61.009	Gallus_gallus
ENSXCOG00000008336	chd1l	96	92.057	ENSGAFG00000018198	chd1l	96	92.057	Gambusia_affinis
ENSXCOG00000008336	chd1l	85	62.687	ENSGAGG00000014432	CHD1L	99	62.486	Gopherus_agassizii
ENSXCOG00000008336	chd1l	85	62.081	ENSGGOG00000001067	CHD1L	96	61.468	Gorilla_gorilla
ENSXCOG00000008336	chd1l	93	77.416	ENSHBUG00000007464	chd1l	98	77.626	Haplochromis_burtoni
ENSXCOG00000008336	chd1l	84	61.512	ENSHGLG00000008933	CHD1L	98	60.884	Heterocephalus_glaber_female
ENSXCOG00000008336	chd1l	82	61.474	ENSHGLG00100007155	CHD1L	100	60.950	Heterocephalus_glaber_male
ENSXCOG00000008336	chd1l	85	72.465	ENSHCOG00000012787	chd1l	94	72.465	Hippocampus_comes
ENSXCOG00000008336	chd1l	96	62.173	ENSIPUG00000022617	chd1l	96	62.892	Ictalurus_punctatus
ENSXCOG00000008336	chd1l	87	56.720	ENSSTOG00000007032	CHD1L	98	56.720	Ictidomys_tridecemlineatus
ENSXCOG00000008336	chd1l	97	75.960	ENSKMAG00000014358	chd1l	97	76.186	Kryptolebias_marmoratus
ENSXCOG00000008336	chd1l	98	75.349	ENSLBEG00000023845	chd1l	96	78.710	Labrus_bergylta
ENSXCOG00000008336	chd1l	96	54.839	ENSLACG00000006262	CHD1L	96	55.343	Latimeria_chalumnae
ENSXCOG00000008336	chd1l	99	64.181	ENSLOCG00000010574	chd1l	100	64.573	Lepisosteus_oculatus
ENSXCOG00000008336	chd1l	84	61.761	ENSLAFG00000018136	CHD1L	100	61.761	Loxodonta_africana
ENSXCOG00000008336	chd1l	83	63.389	ENSMFAG00000043562	CHD1L	99	62.515	Macaca_fascicularis
ENSXCOG00000008336	chd1l	85	62.602	ENSMMUG00000009024	CHD1L	97	61.986	Macaca_mulatta
ENSXCOG00000008336	chd1l	85	62.602	ENSMNEG00000039905	CHD1L	97	61.986	Macaca_nemestrina
ENSXCOG00000008336	chd1l	85	62.602	ENSMLEG00000030900	CHD1L	97	61.986	Mandrillus_leucophaeus
ENSXCOG00000008336	chd1l	97	76.435	ENSMAMG00000012822	chd1l	99	77.445	Mastacembelus_armatus
ENSXCOG00000008336	chd1l	93	77.287	ENSMZEG00005020830	chd1l	94	77.077	Maylandia_zebra
ENSXCOG00000008336	chd1l	84	61.047	ENSMGAG00000014304	CHD1L	99	61.118	Meleagris_gallopavo
ENSXCOG00000008336	chd1l	85	63.140	ENSMICG00000002497	CHD1L	96	62.457	Microcebus_murinus
ENSXCOG00000008336	chd1l	86	61.889	ENSMOCG00000006305	Chd1l	98	61.889	Microtus_ochrogaster
ENSXCOG00000008336	chd1l	85	71.412	ENSMMOG00000005964	chd1l	91	71.527	Mola_mola
ENSXCOG00000008336	chd1l	87	59.641	ENSMODG00000018717	CHD1L	99	59.865	Monodelphis_domestica
ENSXCOG00000008336	chd1l	98	76.714	ENSMALG00000014675	chd1l	97	76.838	Monopterus_albus
ENSXCOG00000008336	chd1l	86	62.401	MGP_CAROLIEiJ_G0025401	Chd1l	97	62.132	Mus_caroli
ENSXCOG00000008336	chd1l	84	62.702	ENSMUSG00000028089	Chd1l	97	62.089	Mus_musculus
ENSXCOG00000008336	chd1l	86	62.472	MGP_PahariEiJ_G0026845	Chd1l	97	62.202	Mus_pahari
ENSXCOG00000008336	chd1l	84	62.933	MGP_SPRETEiJ_G0026347	Chd1l	97	62.089	Mus_spretus
ENSXCOG00000008336	chd1l	87	61.136	ENSMPUG00000000615	CHD1L	97	61.136	Mustela_putorius_furo
ENSXCOG00000008336	chd1l	85	60.714	ENSMLUG00000007573	CHD1L	97	59.977	Myotis_lucifugus
ENSXCOG00000008336	chd1l	85	58.410	ENSNGAG00000000908	Chd1l	98	58.295	Nannospalax_galili
ENSXCOG00000008336	chd1l	85	79.535	ENSNBRG00000006021	chd1l	95	79.302	Neolamprologus_brichardi
ENSXCOG00000008336	chd1l	84	61.844	ENSNLEG00000000179	CHD1L	97	60.800	Nomascus_leucogenys
ENSXCOG00000008336	chd1l	84	52.687	ENSOPRG00000006973	CHD1L	99	52.521	Ochotona_princeps
ENSXCOG00000008336	chd1l	85	58.960	ENSODEG00000002494	CHD1L	97	59.039	Octodon_degus
ENSXCOG00000008336	chd1l	98	76.700	ENSONIG00000003183	chd1l	97	76.500	Oreochromis_niloticus
ENSXCOG00000008336	chd1l	76	58.546	ENSOANG00000003068	CHD1L	93	59.278	Ornithorhynchus_anatinus
ENSXCOG00000008336	chd1l	84	59.450	ENSOCUG00000009336	CHD1L	96	58.286	Oryctolagus_cuniculus
ENSXCOG00000008336	chd1l	85	74.770	ENSORLG00000003673	chd1l	95	74.885	Oryzias_latipes
ENSXCOG00000008336	chd1l	93	73.061	ENSORLG00020005123	chd1l	98	73.166	Oryzias_latipes_hni
ENSXCOG00000008336	chd1l	93	72.737	ENSORLG00015001680	chd1l	98	74.799	Oryzias_latipes_hsok
ENSXCOG00000008336	chd1l	78	74.568	ENSOMEG00000006109	chd1l	90	74.882	Oryzias_melastigma
ENSXCOG00000008336	chd1l	86	61.556	ENSOGAG00000008775	CHD1L	96	61.442	Otolemur_garnettii
ENSXCOG00000008336	chd1l	86	61.379	ENSOARG00000020547	CHD1L	99	61.960	Ovis_aries
ENSXCOG00000008336	chd1l	83	63.189	ENSPPAG00000039193	CHD1L	99	62.364	Pan_paniscus
ENSXCOG00000008336	chd1l	84	62.471	ENSPPRG00000010258	CHD1L	97	61.425	Panthera_pardus
ENSXCOG00000008336	chd1l	85	62.702	ENSPTRG00000001220	CHD1L	96	61.998	Pan_troglodytes
ENSXCOG00000008336	chd1l	84	62.881	ENSPANG00000009170	CHD1L	97	61.872	Papio_anubis
ENSXCOG00000008336	chd1l	96	66.224	ENSPKIG00000022166	chd1l	97	68.351	Paramormyrops_kingsleyae
ENSXCOG00000008336	chd1l	84	63.232	ENSPSIG00000012595	CHD1L	96	62.428	Pelodiscus_sinensis
ENSXCOG00000008336	chd1l	85	62.037	ENSPEMG00000013528	Chd1l	98	61.486	Peromyscus_maniculatus_bairdii
ENSXCOG00000008336	chd1l	82	60.072	ENSPCIG00000030409	CHD1L	100	60.552	Phascolarctos_cinereus
ENSXCOG00000008336	chd1l	96	89.704	ENSPFOG00000015948	chd1l	96	89.704	Poecilia_formosa
ENSXCOG00000008336	chd1l	96	90.641	ENSPLAG00000015145	chd1l	97	91.619	Poecilia_latipinna
ENSXCOG00000008336	chd1l	93	90.285	ENSPMEG00000008720	chd1l	99	90.285	Poecilia_mexicana
ENSXCOG00000008336	chd1l	85	88.812	ENSPREG00000017885	chd1l	98	88.927	Poecilia_reticulata
ENSXCOG00000008336	chd1l	85	62.212	ENSPPYG00000000946	CHD1L	97	61.600	Pongo_abelii
ENSXCOG00000008336	chd1l	80	55.897	ENSPCAG00000005959	CHD1L	91	56.479	Procavia_capensis
ENSXCOG00000008336	chd1l	84	60.870	ENSPVAG00000006084	CHD1L	100	60.752	Pteropus_vampyrus
ENSXCOG00000008336	chd1l	85	77.968	ENSPNYG00000013001	chd1l	97	77.740	Pundamilia_nyererei
ENSXCOG00000008336	chd1l	98	64.950	ENSPNAG00000011881	chd1l	97	65.647	Pygocentrus_nattereri
ENSXCOG00000008336	chd1l	86	62.386	ENSRNOG00000017669	Chd1l	97	62.386	Rattus_norvegicus
ENSXCOG00000008336	chd1l	85	62.327	ENSRBIG00000041272	CHD1L	97	61.872	Rhinopithecus_bieti
ENSXCOG00000008336	chd1l	84	62.500	ENSRROG00000041354	CHD1L	96	62.500	Rhinopithecus_roxellana
ENSXCOG00000008336	chd1l	84	60.400	ENSSHAG00000017395	CHD1L	97	60.345	Sarcophilus_harrisii
ENSXCOG00000008336	chd1l	93	67.194	ENSSFOG00015003649	chd1l	98	68.318	Scleropages_formosus
ENSXCOG00000008336	chd1l	98	72.520	ENSSMAG00000019377	chd1l	96	74.742	Scophthalmus_maximus
ENSXCOG00000008336	chd1l	83	80.213	ENSSDUG00000019831	chd1l	95	80.213	Seriola_dumerili
ENSXCOG00000008336	chd1l	83	80.756	ENSSLDG00000012714	chd1l	95	80.756	Seriola_lalandi_dorsalis
ENSXCOG00000008336	chd1l	86	59.840	ENSSPUG00000016865	CHD1L	98	60.412	Sphenodon_punctatus
ENSXCOG00000008336	chd1l	93	78.347	ENSSPAG00000017653	chd1l	99	78.842	Stegastes_partitus
ENSXCOG00000008336	chd1l	85	63.820	ENSSSCG00000006701	CHD1L	98	63.011	Sus_scrofa
ENSXCOG00000008336	chd1l	84	61.196	ENSTGUG00000013392	-	99	60.620	Taeniopygia_guttata
ENSXCOG00000008336	chd1l	83	65.691	ENSTNIG00000004902	chd1l	99	65.691	Tetraodon_nigroviridis
ENSXCOG00000008336	chd1l	85	59.954	ENSTTRG00000011711	CHD1L	100	59.954	Tursiops_truncatus
ENSXCOG00000008336	chd1l	86	61.512	ENSUAMG00000021991	CHD1L	96	62.915	Ursus_americanus
ENSXCOG00000008336	chd1l	86	61.416	ENSUMAG00000009733	CHD1L	98	62.368	Ursus_maritimus
ENSXCOG00000008336	chd1l	87	60.658	ENSVVUG00000007316	CHD1L	93	60.658	Vulpes_vulpes
ENSXCOG00000008336	chd1l	96	93.661	ENSXMAG00000015898	chd1l	96	93.661	Xiphophorus_maculatus