EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000008397 (Gene tree)
Gene ID: -
Gene Symbol: zmat3
Alias: zmp:0000000878
Full Name: zinc finger%2C matrin-type 3
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5656 bases
Position: chrKQ557225.1:23824055-23829710
Accession: ZDB-GENE-130530-881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011113	zf-met	PF12874.7	9.4e-23	1	3
ENSXCOP00000011113	zf-met	PF12874.7	9.4e-23	2	3
ENSXCOP00000011113	zf-met	PF12874.7	9.4e-23	3	3
ENSXCOP00000011113	zf-C2H2_jaz	PF12171.8	2.5e-20	1	3
ENSXCOP00000011113	zf-C2H2_jaz	PF12171.8	2.5e-20	2	3
ENSXCOP00000011113	zf-C2H2_jaz	PF12171.8	2.5e-20	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011240	-	822	-	ENSXCOP00000011113	273 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008397	zmat3	93	65.019	ENSG00000172667	ZMAT3	88	65.019	Homo_sapiens
ENSXCOG00000008397	zmat3	98	81.319	ENSAPOG00000015037	zmat3	98	82.784	Acanthochromis_polyacanthus
ENSXCOG00000008397	zmat3	93	65.267	ENSAMEG00000010742	ZMAT3	88	65.267	Ailuropoda_melanoleuca
ENSXCOG00000008397	zmat3	100	80.565	ENSACIG00000023037	zmat3	96	80.565	Amphilophus_citrinellus
ENSXCOG00000008397	zmat3	100	83.813	ENSAOCG00000017955	zmat3	94	83.813	Amphiprion_ocellaris
ENSXCOG00000008397	zmat3	98	81.985	ENSAPEG00000014553	zmat3	97	81.985	Amphiprion_percula
ENSXCOG00000008397	zmat3	93	83.525	ENSATEG00000022244	zmat3	98	83.525	Anabas_testudineus
ENSXCOG00000008397	zmat3	97	63.869	ENSAPLG00000013292	ZMAT3	94	63.869	Anas_platyrhynchos
ENSXCOG00000008397	zmat3	95	64.179	ENSACAG00000005005	ZMAT3	93	63.636	Anolis_carolinensis
ENSXCOG00000008397	zmat3	94	59.851	ENSANAG00000035673	ZMAT3	93	60.294	Aotus_nancymaae
ENSXCOG00000008397	zmat3	100	82.671	ENSACLG00000026272	zmat3	94	83.394	Astatotilapia_calliptera
ENSXCOG00000008397	zmat3	97	68.214	ENSAMXG00000009798	zmat3	75	68.214	Astyanax_mexicanus
ENSXCOG00000008397	zmat3	93	65.517	ENSBTAG00000012463	ZMAT3	99	61.486	Bos_taurus
ENSXCOG00000008397	zmat3	97	62.319	ENSCJAG00000013399	ZMAT3	93	62.724	Callithrix_jacchus
ENSXCOG00000008397	zmat3	93	65.517	ENSCAFG00000011081	ZMAT3	88	65.517	Canis_familiaris
ENSXCOG00000008397	zmat3	93	65.517	ENSCAFG00020023107	ZMAT3	88	65.517	Canis_lupus_dingo
ENSXCOG00000008397	zmat3	93	65.019	ENSCHIG00000025074	ZMAT3	99	61.356	Capra_hircus
ENSXCOG00000008397	zmat3	99	59.386	ENSTSYG00000026546	ZMAT3	88	64.639	Carlito_syrichta
ENSXCOG00000008397	zmat3	99	59.727	ENSCAPG00000014645	ZMAT3	99	59.727	Cavia_aperea
ENSXCOG00000008397	zmat3	99	59.727	ENSCPOG00000003865	ZMAT3	99	59.727	Cavia_porcellus
ENSXCOG00000008397	zmat3	97	62.545	ENSCCAG00000036721	ZMAT3	93	62.950	Cebus_capucinus
ENSXCOG00000008397	zmat3	97	57.509	ENSCATG00000025137	ZMAT3	93	57.509	Cercocebus_atys
ENSXCOG00000008397	zmat3	97	63.177	ENSCLAG00000013464	ZMAT3	93	63.177	Chinchilla_lanigera
ENSXCOG00000008397	zmat3	93	64.259	ENSCSAG00000012935	ZMAT3	88	64.259	Chlorocebus_sabaeus
ENSXCOG00000008397	zmat3	93	66.160	ENSCHOG00000005591	ZMAT3	88	66.160	Choloepus_hoffmanni
ENSXCOG00000008397	zmat3	97	62.362	ENSCPBG00000026917	ZMAT3	93	62.362	Chrysemys_picta_bellii
ENSXCOG00000008397	zmat3	93	64.015	ENSCANG00000029476	ZMAT3	88	64.015	Colobus_angolensis_palliatus
ENSXCOG00000008397	zmat3	97	60.949	ENSCGRG00001012339	Zmat3	93	60.949	Cricetulus_griseus_chok1gshd
ENSXCOG00000008397	zmat3	97	60.949	ENSCGRG00000011491	Zmat3	93	60.949	Cricetulus_griseus_crigri
ENSXCOG00000008397	zmat3	100	74.729	ENSCSEG00000019463	zmat3	89	74.729	Cynoglossus_semilaevis
ENSXCOG00000008397	zmat3	100	80.836	ENSCVAG00000011847	zmat3	100	80.836	Cyprinodon_variegatus
ENSXCOG00000008397	zmat3	84	72.840	ENSDARG00000080021	zmat3	96	64.333	Danio_rerio
ENSXCOG00000008397	zmat3	84	69.328	ENSDNOG00000012284	ZMAT3	81	69.328	Dasypus_novemcinctus
ENSXCOG00000008397	zmat3	92	64.504	ENSDORG00000011801	Zmat3	99	59.322	Dipodomys_ordii
ENSXCOG00000008397	zmat3	95	53.138	ENSETEG00000008883	ZMAT3	100	53.138	Echinops_telfairi
ENSXCOG00000008397	zmat3	84	68.776	ENSEASG00005016887	ZMAT3	99	60.678	Equus_asinus_asinus
ENSXCOG00000008397	zmat3	84	68.776	ENSECAG00000012784	ZMAT3	99	60.678	Equus_caballus
ENSXCOG00000008397	zmat3	99	53.770	ENSEEUG00000001126	ZMAT3	99	53.770	Erinaceus_europaeus
ENSXCOG00000008397	zmat3	89	72.763	ENSELUG00000010132	zmat3	78	65.781	Esox_lucius
ENSXCOG00000008397	zmat3	99	60.339	ENSFCAG00000014578	ZMAT3	99	60.339	Felis_catus
ENSXCOG00000008397	zmat3	96	63.704	ENSFALG00000008403	ZMAT3	93	63.704	Ficedula_albicollis
ENSXCOG00000008397	zmat3	99	59.386	ENSFDAG00000013376	ZMAT3	99	59.386	Fukomys_damarensis
ENSXCOG00000008397	zmat3	100	85.357	ENSFHEG00000003221	zmat3	100	86.786	Fundulus_heteroclitus
ENSXCOG00000008397	zmat3	86	79.253	ENSGMOG00000008558	zmat3	100	79.253	Gadus_morhua
ENSXCOG00000008397	zmat3	96	63.704	ENSGALG00000040948	ZMAT3	93	68.619	Gallus_gallus
ENSXCOG00000008397	zmat3	56	98.701	ENSGAFG00000010485	zmat3	56	98.701	Gambusia_affinis
ENSXCOG00000008397	zmat3	91	84.047	ENSGACG00000006175	zmat3	98	84.047	Gasterosteus_aculeatus
ENSXCOG00000008397	zmat3	97	62.362	ENSGAGG00000009275	ZMAT3	93	62.362	Gopherus_agassizii
ENSXCOG00000008397	zmat3	93	65.019	ENSGGOG00000009975	ZMAT3	88	65.019	Gorilla_gorilla
ENSXCOG00000008397	zmat3	100	82.624	ENSHBUG00000004401	zmat3	100	82.624	Haplochromis_burtoni
ENSXCOG00000008397	zmat3	99	60.959	ENSHGLG00000011523	ZMAT3	99	60.959	Heterocephalus_glaber_female
ENSXCOG00000008397	zmat3	99	60.959	ENSHGLG00100012235	ZMAT3	99	60.959	Heterocephalus_glaber_male
ENSXCOG00000008397	zmat3	97	76.119	ENSHCOG00000010624	zmat3	82	76.119	Hippocampus_comes
ENSXCOG00000008397	zmat3	96	64.311	ENSIPUG00000003043	zmat3	85	72.152	Ictalurus_punctatus
ENSXCOG00000008397	zmat3	93	64.231	ENSSTOG00000028436	ZMAT3	88	64.639	Ictidomys_tridecemlineatus
ENSXCOG00000008397	zmat3	81	68.996	ENSJJAG00000004288	Zmat3	98	60.211	Jaculus_jaculus
ENSXCOG00000008397	zmat3	91	87.452	ENSKMAG00000008962	zmat3	94	86.640	Kryptolebias_marmoratus
ENSXCOG00000008397	zmat3	100	81.625	ENSLBEG00000001993	zmat3	100	81.625	Labrus_bergylta
ENSXCOG00000008397	zmat3	98	56.140	ENSLACG00000015780	ZMAT3	74	57.721	Latimeria_chalumnae
ENSXCOG00000008397	zmat3	87	69.048	ENSLOCG00000001108	zmat3	76	64.894	Lepisosteus_oculatus
ENSXCOG00000008397	zmat3	93	65.530	ENSLAFG00000000897	ZMAT3	99	60.403	Loxodonta_africana
ENSXCOG00000008397	zmat3	93	64.639	ENSMFAG00000021292	ZMAT3	88	64.639	Macaca_fascicularis
ENSXCOG00000008397	zmat3	93	64.394	ENSMMUG00000003216	ZMAT3	88	64.394	Macaca_mulatta
ENSXCOG00000008397	zmat3	93	64.015	ENSMNEG00000036725	ZMAT3	88	64.015	Macaca_nemestrina
ENSXCOG00000008397	zmat3	97	62.143	ENSMLEG00000026279	ZMAT3	94	62.143	Mandrillus_leucophaeus
ENSXCOG00000008397	zmat3	100	78.893	ENSMAMG00000012349	zmat3	94	82.332	Mastacembelus_armatus
ENSXCOG00000008397	zmat3	100	82.671	ENSMZEG00005015427	zmat3	94	83.394	Maylandia_zebra
ENSXCOG00000008397	zmat3	96	63.704	ENSMGAG00000009873	ZMAT3	93	63.704	Meleagris_gallopavo
ENSXCOG00000008397	zmat3	97	60.791	ENSMAUG00000001986	Zmat3	93	60.791	Mesocricetus_auratus
ENSXCOG00000008397	zmat3	99	60.274	ENSMICG00000049501	ZMAT3	99	60.274	Microcebus_murinus
ENSXCOG00000008397	zmat3	97	61.511	ENSMOCG00000018844	Zmat3	93	61.511	Microtus_ochrogaster
ENSXCOG00000008397	zmat3	91	87.200	ENSMMOG00000001603	zmat3	87	83.026	Mola_mola
ENSXCOG00000008397	zmat3	93	58.712	ENSMODG00000021308	ZMAT3	88	58.712	Monodelphis_domestica
ENSXCOG00000008397	zmat3	98	81.618	ENSMALG00000019683	zmat3	96	81.618	Monopterus_albus
ENSXCOG00000008397	zmat3	97	60.219	MGP_CAROLIEiJ_G0024914	Zmat3	93	60.219	Mus_caroli
ENSXCOG00000008397	zmat3	97	60.219	ENSMUSG00000027663	Zmat3	93	60.219	Mus_musculus
ENSXCOG00000008397	zmat3	97	59.489	MGP_PahariEiJ_G0026359	Zmat3	93	59.489	Mus_pahari
ENSXCOG00000008397	zmat3	97	60.219	MGP_SPRETEiJ_G0025848	Zmat3	93	60.219	Mus_spretus
ENSXCOG00000008397	zmat3	99	61.017	ENSMPUG00000017206	ZMAT3	99	61.017	Mustela_putorius_furo
ENSXCOG00000008397	zmat3	93	63.534	ENSMLUG00000013074	ZMAT3	88	63.534	Myotis_lucifugus
ENSXCOG00000008397	zmat3	81	69.432	ENSNGAG00000023602	Zmat3	78	69.432	Nannospalax_galili
ENSXCOG00000008397	zmat3	100	82.624	ENSNBRG00000020886	zmat3	100	82.624	Neolamprologus_brichardi
ENSXCOG00000008397	zmat3	93	64.773	ENSNLEG00000005658	ZMAT3	88	64.773	Nomascus_leucogenys
ENSXCOG00000008397	zmat3	83	66.953	ENSMEUG00000015724	ZMAT3	79	67.382	Notamacropus_eugenii
ENSXCOG00000008397	zmat3	99	58.562	ENSODEG00000003313	ZMAT3	99	58.904	Octodon_degus
ENSXCOG00000008397	zmat3	99	79.798	ENSONIG00000008388	zmat3	99	79.798	Oreochromis_niloticus
ENSXCOG00000008397	zmat3	93	54.902	ENSOANG00000009901	ZMAT3	76	54.902	Ornithorhynchus_anatinus
ENSXCOG00000008397	zmat3	82	67.965	ENSOCUG00000004658	ZMAT3	99	60.678	Oryctolagus_cuniculus
ENSXCOG00000008397	zmat3	86	84.000	ENSORLG00000011575	zmat3	57	78.571	Oryzias_latipes
ENSXCOG00000008397	zmat3	86	85.200	ENSORLG00020005858	zmat3	57	79.643	Oryzias_latipes_hni
ENSXCOG00000008397	zmat3	86	84.400	ENSORLG00015003707	zmat3	55	81.852	Oryzias_latipes_hsok
ENSXCOG00000008397	zmat3	86	84.937	ENSOMEG00000011303	zmat3	78	84.937	Oryzias_melastigma
ENSXCOG00000008397	zmat3	93	64.773	ENSOGAG00000003252	ZMAT3	99	59.396	Otolemur_garnettii
ENSXCOG00000008397	zmat3	93	64.773	ENSOARG00000020713	ZMAT3	99	61.149	Ovis_aries
ENSXCOG00000008397	zmat3	93	65.019	ENSPPAG00000035483	ZMAT3	88	65.019	Pan_paniscus
ENSXCOG00000008397	zmat3	99	60.811	ENSPPRG00000004407	ZMAT3	99	60.811	Panthera_pardus
ENSXCOG00000008397	zmat3	99	60.811	ENSPTIG00000009929	ZMAT3	99	60.811	Panthera_tigris_altaica
ENSXCOG00000008397	zmat3	93	64.773	ENSPTRG00000015641	ZMAT3	88	64.773	Pan_troglodytes
ENSXCOG00000008397	zmat3	97	63.177	ENSPANG00000023167	ZMAT3	94	63.177	Papio_anubis
ENSXCOG00000008397	zmat3	84	71.967	ENSPKIG00000023370	zmat3	71	68.061	Paramormyrops_kingsleyae
ENSXCOG00000008397	zmat3	97	61.852	ENSPSIG00000014839	ZMAT3	92	61.852	Pelodiscus_sinensis
ENSXCOG00000008397	zmat3	96	71.956	ENSPMGG00000023924	zmat3	99	71.956	Periophthalmus_magnuspinnatus
ENSXCOG00000008397	zmat3	97	60.791	ENSPEMG00000019154	Zmat3	93	60.791	Peromyscus_maniculatus_bairdii
ENSXCOG00000008397	zmat3	91	92.015	ENSPFOG00000019206	zmat3	69	92.015	Poecilia_formosa
ENSXCOG00000008397	zmat3	100	90.877	ENSPLAG00000022572	zmat3	100	90.877	Poecilia_latipinna
ENSXCOG00000008397	zmat3	100	77.305	ENSPMEG00000004131	-	100	78.947	Poecilia_mexicana
ENSXCOG00000008397	zmat3	100	92.701	ENSPREG00000022632	zmat3	100	92.701	Poecilia_reticulata
ENSXCOG00000008397	zmat3	93	64.751	ENSPPYG00000014315	ZMAT3	88	64.751	Pongo_abelii
ENSXCOG00000008397	zmat3	99	59.932	ENSPCAG00000008585	ZMAT3	99	59.864	Procavia_capensis
ENSXCOG00000008397	zmat3	99	60.274	ENSPCOG00000022835	ZMAT3	99	60.274	Propithecus_coquereli
ENSXCOG00000008397	zmat3	97	62.007	ENSPVAG00000004489	ZMAT3	93	62.007	Pteropus_vampyrus
ENSXCOG00000008397	zmat3	100	82.624	ENSPNYG00000014350	zmat3	100	82.624	Pundamilia_nyererei
ENSXCOG00000008397	zmat3	97	67.857	ENSPNAG00000015664	zmat3	75	67.857	Pygocentrus_nattereri
ENSXCOG00000008397	zmat3	94	59.498	ENSRNOG00000010119	Zmat3	96	59.498	Rattus_norvegicus
ENSXCOG00000008397	zmat3	93	64.259	ENSRBIG00000029622	ZMAT3	88	64.259	Rhinopithecus_bieti
ENSXCOG00000008397	zmat3	93	64.015	ENSRROG00000038345	ZMAT3	88	64.015	Rhinopithecus_roxellana
ENSXCOG00000008397	zmat3	93	63.846	ENSSBOG00000033332	ZMAT3	93	62.590	Saimiri_boliviensis_boliviensis
ENSXCOG00000008397	zmat3	83	67.949	ENSSHAG00000016154	ZMAT3	80	67.949	Sarcophilus_harrisii
ENSXCOG00000008397	zmat3	84	73.707	ENSSFOG00015006984	zmat3	98	65.035	Scleropages_formosus
ENSXCOG00000008397	zmat3	98	79.505	ENSSMAG00000019540	-	61	79.505	Scophthalmus_maximus
ENSXCOG00000008397	zmat3	90	85.156	ENSSDUG00000016188	zmat3	77	85.156	Seriola_dumerili
ENSXCOG00000008397	zmat3	90	86.154	ENSSLDG00000018611	zmat3	77	85.156	Seriola_lalandi_dorsalis
ENSXCOG00000008397	zmat3	56	63.975	ENSSARG00000004901	ZMAT3	71	63.975	Sorex_araneus
ENSXCOG00000008397	zmat3	88	65.182	ENSSPUG00000014753	ZMAT3	94	61.624	Sphenodon_punctatus
ENSXCOG00000008397	zmat3	97	82.593	ENSSPAG00000011062	zmat3	79	86.614	Stegastes_partitus
ENSXCOG00000008397	zmat3	99	60.678	ENSSSCG00000033860	ZMAT3	99	60.678	Sus_scrofa
ENSXCOG00000008397	zmat3	96	63.704	ENSTGUG00000010765	-	93	63.704	Taeniopygia_guttata
ENSXCOG00000008397	zmat3	83	88.646	ENSTRUG00000004788	zmat3	95	80.074	Takifugu_rubripes
ENSXCOG00000008397	zmat3	91	82.692	ENSTNIG00000006781	zmat3	97	79.348	Tetraodon_nigroviridis
ENSXCOG00000008397	zmat3	64	74.000	ENSTBEG00000012359	ZMAT3	94	74.000	Tupaia_belangeri
ENSXCOG00000008397	zmat3	84	67.382	ENSTTRG00000004923	ZMAT3	99	59.794	Tursiops_truncatus
ENSXCOG00000008397	zmat3	93	64.504	ENSUAMG00000007623	ZMAT3	88	64.504	Ursus_americanus
ENSXCOG00000008397	zmat3	93	64.751	ENSUMAG00000007847	ZMAT3	88	64.751	Ursus_maritimus
ENSXCOG00000008397	zmat3	84	68.067	ENSVPAG00000006611	ZMAT3	99	60.135	Vicugna_pacos
ENSXCOG00000008397	zmat3	99	61.433	ENSVVUG00000004729	ZMAT3	99	61.433	Vulpes_vulpes
ENSXCOG00000008397	zmat3	91	62.698	ENSXETG00000007251	zmat3	86	62.698	Xenopus_tropicalis
ENSXCOG00000008397	zmat3	100	96.429	ENSXMAG00000015188	zmat3	61	96.429	Xiphophorus_maculatus