EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008477 (Gene tree)
Gene ID: -
Gene Symbol: sf3b6
Alias: sf3b14|zgc:86708
Full Name: splicing factor 3b%2C subunit 6
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1340 bases
Position: chrKQ557207.1:19624267-19625606
Accession: ZDB-GENE-040625-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011203	RRM_1	PF00076.22	3.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011333	-	390	-	ENSXCOP00000011203	129 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008477	sf3b6	54	34.722	ENSXCOG00000012134	-	78	34.722
ENSXCOG00000008477	sf3b6	54	31.507	ENSXCOG00000008262	cirbpa	78	33.871

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008477	sf3b6	88	85.841	ENSG00000115128	SF3B6	86	85.841	Homo_sapiens
ENSXCOG00000008477	sf3b6	88	87.611	ENSAPOG00000023788	sf3b6	86	87.611	Acanthochromis_polyacanthus
ENSXCOG00000008477	sf3b6	88	85.841	ENSAMEG00000002786	SF3B6	86	85.841	Ailuropoda_melanoleuca
ENSXCOG00000008477	sf3b6	88	87.611	ENSACIG00000012608	sf3b6	86	87.611	Amphilophus_citrinellus
ENSXCOG00000008477	sf3b6	88	87.611	ENSAOCG00000013394	sf3b6	86	87.611	Amphiprion_ocellaris
ENSXCOG00000008477	sf3b6	88	87.611	ENSAPEG00000015311	sf3b6	86	87.611	Amphiprion_percula
ENSXCOG00000008477	sf3b6	88	87.611	ENSATEG00000016569	sf3b6	86	87.611	Anabas_testudineus
ENSXCOG00000008477	sf3b6	88	85.841	ENSACAG00000011677	SF3B6	86	85.841	Anolis_carolinensis
ENSXCOG00000008477	sf3b6	88	85.841	ENSANAG00000027284	SF3B6	82	85.841	Aotus_nancymaae
ENSXCOG00000008477	sf3b6	88	87.611	ENSACLG00000007793	sf3b6	86	100.000	Astatotilapia_calliptera
ENSXCOG00000008477	sf3b6	88	85.841	ENSAMXG00000034888	sf3b6	86	85.841	Astyanax_mexicanus
ENSXCOG00000008477	sf3b6	88	84.071	ENSBTAG00000049128	-	86	84.071	Bos_taurus
ENSXCOG00000008477	sf3b6	88	85.841	ENSBTAG00000003407	SF3B6	86	85.841	Bos_taurus
ENSXCOG00000008477	sf3b6	74	72.917	WBGene00016808	C50D2.5	70	72.917	Caenorhabditis_elegans
ENSXCOG00000008477	sf3b6	88	85.841	ENSCJAG00000007716	SF3B6	86	85.841	Callithrix_jacchus
ENSXCOG00000008477	sf3b6	88	85.841	ENSCAFG00000003957	SF3B6	86	85.841	Canis_familiaris
ENSXCOG00000008477	sf3b6	78	96.000	ENSCAFG00020025576	SF3B6	86	85.841	Canis_lupus_dingo
ENSXCOG00000008477	sf3b6	88	85.841	ENSCHIG00000009902	SF3B6	86	85.841	Capra_hircus
ENSXCOG00000008477	sf3b6	88	85.841	ENSTSYG00000013978	SF3B6	86	85.841	Carlito_syrichta
ENSXCOG00000008477	sf3b6	84	81.651	ENSCAPG00000016302	SF3B6	84	81.651	Cavia_aperea
ENSXCOG00000008477	sf3b6	88	85.841	ENSCPOG00000008016	SF3B6	86	85.841	Cavia_porcellus
ENSXCOG00000008477	sf3b6	88	84.071	ENSCCAG00000018894	-	84	84.071	Cebus_capucinus
ENSXCOG00000008477	sf3b6	88	85.841	ENSCCAG00000036653	SF3B6	86	85.841	Cebus_capucinus
ENSXCOG00000008477	sf3b6	88	85.841	ENSCATG00000030936	SF3B6	86	85.841	Cercocebus_atys
ENSXCOG00000008477	sf3b6	88	85.841	ENSCLAG00000014512	SF3B6	86	85.841	Chinchilla_lanigera
ENSXCOG00000008477	sf3b6	88	85.841	ENSCSAG00000008390	SF3B6	86	85.841	Chlorocebus_sabaeus
ENSXCOG00000008477	sf3b6	88	85.841	ENSCHOG00000000689	SF3B6	86	85.841	Choloepus_hoffmanni
ENSXCOG00000008477	sf3b6	74	83.158	ENSCHOG00000013886	-	81	83.158	Choloepus_hoffmanni
ENSXCOG00000008477	sf3b6	88	85.841	ENSCPBG00000020042	SF3B6	86	85.841	Chrysemys_picta_bellii
ENSXCOG00000008477	sf3b6	74	89.583	ENSCING00000012689	-	76	89.583	Ciona_intestinalis
ENSXCOG00000008477	sf3b6	88	85.841	ENSCANG00000030559	SF3B6	86	85.841	Colobus_angolensis_palliatus
ENSXCOG00000008477	sf3b6	88	85.841	ENSCGRG00001014595	Sf3b6	86	85.841	Cricetulus_griseus_chok1gshd
ENSXCOG00000008477	sf3b6	88	85.841	ENSCGRG00000005272	Sf3b6	86	85.841	Cricetulus_griseus_crigri
ENSXCOG00000008477	sf3b6	88	86.726	ENSCSEG00000019017	sf3b6	86	86.726	Cynoglossus_semilaevis
ENSXCOG00000008477	sf3b6	88	86.726	ENSCVAG00000005055	sf3b6	86	86.726	Cyprinodon_variegatus
ENSXCOG00000008477	sf3b6	88	85.841	ENSDARG00000009753	sf3b6	86	85.841	Danio_rerio
ENSXCOG00000008477	sf3b6	88	85.841	ENSDNOG00000007148	SF3B6	86	85.841	Dasypus_novemcinctus
ENSXCOG00000008477	sf3b6	71	81.915	ENSDORG00000029761	-	76	81.915	Dipodomys_ordii
ENSXCOG00000008477	sf3b6	88	85.841	ENSDORG00000009772	Sf3b6	86	85.841	Dipodomys_ordii
ENSXCOG00000008477	sf3b6	71	81.915	ENSDORG00000027390	-	76	81.915	Dipodomys_ordii
ENSXCOG00000008477	sf3b6	70	86.667	FBgn0035692	Sf3b6	74	86.667	Drosophila_melanogaster
ENSXCOG00000008477	sf3b6	85	79.464	ENSEBUG00000004424	sf3b6	83	79.464	Eptatretus_burgeri
ENSXCOG00000008477	sf3b6	88	85.841	ENSEASG00005009993	SF3B6	86	85.841	Equus_asinus_asinus
ENSXCOG00000008477	sf3b6	74	86.458	ENSEASG00005008061	-	86	76.106	Equus_asinus_asinus
ENSXCOG00000008477	sf3b6	78	84.314	ENSECAG00000027755	-	87	84.314	Equus_caballus
ENSXCOG00000008477	sf3b6	78	95.000	ENSECAG00000015618	SF3B6	92	95.000	Equus_caballus
ENSXCOG00000008477	sf3b6	88	85.841	ENSELUG00000010379	sf3b6	86	85.841	Esox_lucius
ENSXCOG00000008477	sf3b6	88	85.841	ENSFCAG00000031365	SF3B6	86	85.841	Felis_catus
ENSXCOG00000008477	sf3b6	88	85.841	ENSFALG00000001651	SF3B6	86	85.841	Ficedula_albicollis
ENSXCOG00000008477	sf3b6	88	85.841	ENSFDAG00000007864	SF3B6	86	85.841	Fukomys_damarensis
ENSXCOG00000008477	sf3b6	88	86.726	ENSFHEG00000000685	sf3b6	86	86.726	Fundulus_heteroclitus
ENSXCOG00000008477	sf3b6	88	84.956	ENSGMOG00000005123	sf3b6	86	84.956	Gadus_morhua
ENSXCOG00000008477	sf3b6	61	81.013	ENSGALG00000016501	SF3B6	80	81.013	Gallus_gallus
ENSXCOG00000008477	sf3b6	88	87.611	ENSGAFG00000009334	sf3b6	86	87.611	Gambusia_affinis
ENSXCOG00000008477	sf3b6	88	86.726	ENSGACG00000004803	sf3b6	86	86.726	Gasterosteus_aculeatus
ENSXCOG00000008477	sf3b6	88	85.841	ENSGAGG00000012240	SF3B6	86	85.841	Gopherus_agassizii
ENSXCOG00000008477	sf3b6	88	85.841	ENSGGOG00000040806	SF3B6	86	85.841	Gorilla_gorilla
ENSXCOG00000008477	sf3b6	88	87.611	ENSHBUG00000012556	sf3b6	86	87.611	Haplochromis_burtoni
ENSXCOG00000008477	sf3b6	88	85.841	ENSHGLG00000014895	SF3B14	86	85.841	Heterocephalus_glaber_female
ENSXCOG00000008477	sf3b6	88	85.841	ENSHGLG00100008639	SF3B14	86	85.841	Heterocephalus_glaber_male
ENSXCOG00000008477	sf3b6	88	86.726	ENSHCOG00000019962	sf3b6	86	86.726	Hippocampus_comes
ENSXCOG00000008477	sf3b6	88	85.841	ENSIPUG00000023800	sf3b6	86	85.841	Ictalurus_punctatus
ENSXCOG00000008477	sf3b6	88	85.841	ENSJJAG00000021819	Sf3b6	86	85.841	Jaculus_jaculus
ENSXCOG00000008477	sf3b6	88	87.611	ENSKMAG00000004000	sf3b6	86	87.611	Kryptolebias_marmoratus
ENSXCOG00000008477	sf3b6	88	85.841	ENSLBEG00000022937	sf3b6	86	85.841	Labrus_bergylta
ENSXCOG00000008477	sf3b6	88	85.841	ENSLACG00000014326	SF3B6	86	85.841	Latimeria_chalumnae
ENSXCOG00000008477	sf3b6	88	85.841	ENSLOCG00000016481	sf3b6	86	85.841	Lepisosteus_oculatus
ENSXCOG00000008477	sf3b6	88	85.841	ENSLAFG00000029423	SF3B6	86	85.841	Loxodonta_africana
ENSXCOG00000008477	sf3b6	88	85.841	ENSMFAG00000038178	SF3B6	86	85.841	Macaca_fascicularis
ENSXCOG00000008477	sf3b6	88	85.841	ENSMMUG00000001282	SF3B6	86	85.841	Macaca_mulatta
ENSXCOG00000008477	sf3b6	88	85.841	ENSMNEG00000029050	SF3B6	86	85.841	Macaca_nemestrina
ENSXCOG00000008477	sf3b6	88	85.841	ENSMLEG00000019896	SF3B6	86	85.841	Mandrillus_leucophaeus
ENSXCOG00000008477	sf3b6	75	100.000	ENSMAMG00000007713	sf3b6	88	100.000	Mastacembelus_armatus
ENSXCOG00000008477	sf3b6	88	87.611	ENSMZEG00005003557	sf3b6	86	87.611	Maylandia_zebra
ENSXCOG00000008477	sf3b6	88	85.841	ENSMGAG00000014057	SF3B6	86	85.841	Meleagris_gallopavo
ENSXCOG00000008477	sf3b6	88	85.841	ENSMAUG00000000586	-	86	85.841	Mesocricetus_auratus
ENSXCOG00000008477	sf3b6	88	85.841	ENSMICG00000032874	SF3B6	86	85.841	Microcebus_murinus
ENSXCOG00000008477	sf3b6	88	85.841	ENSMOCG00000014338	Sf3b6	86	85.841	Microtus_ochrogaster
ENSXCOG00000008477	sf3b6	88	86.726	ENSMMOG00000015653	sf3b6	86	86.726	Mola_mola
ENSXCOG00000008477	sf3b6	67	97.674	ENSMODG00000002144	SF3B6	69	97.674	Monodelphis_domestica
ENSXCOG00000008477	sf3b6	88	86.726	ENSMALG00000019642	sf3b6	58	86.726	Monopterus_albus
ENSXCOG00000008477	sf3b6	88	85.841	MGP_CAROLIEiJ_G0017590	Sf3b6	86	85.841	Mus_caroli
ENSXCOG00000008477	sf3b6	88	85.841	ENSMUSG00000037361	Sf3b6	77	97.674	Mus_musculus
ENSXCOG00000008477	sf3b6	88	85.841	MGP_PahariEiJ_G0029348	Sf3b6	86	85.841	Mus_pahari
ENSXCOG00000008477	sf3b6	88	85.841	MGP_SPRETEiJ_G0018434	Sf3b6	86	85.841	Mus_spretus
ENSXCOG00000008477	sf3b6	88	85.841	ENSMPUG00000013957	SF3B6	86	85.841	Mustela_putorius_furo
ENSXCOG00000008477	sf3b6	88	84.071	ENSMLUG00000002473	SF3B6	86	84.071	Myotis_lucifugus
ENSXCOG00000008477	sf3b6	88	85.841	ENSNGAG00000020256	Sf3b6	86	85.841	Nannospalax_galili
ENSXCOG00000008477	sf3b6	88	87.611	ENSNBRG00000018244	sf3b6	86	87.611	Neolamprologus_brichardi
ENSXCOG00000008477	sf3b6	88	85.841	ENSNLEG00000000815	-	86	85.841	Nomascus_leucogenys
ENSXCOG00000008477	sf3b6	75	83.505	ENSODEG00000009547	SF3B6	76	83.505	Octodon_degus
ENSXCOG00000008477	sf3b6	88	87.611	ENSONIG00000001219	sf3b6	86	87.611	Oreochromis_niloticus
ENSXCOG00000008477	sf3b6	88	85.841	ENSOANG00000007627	SF3B6	86	85.841	Ornithorhynchus_anatinus
ENSXCOG00000008477	sf3b6	88	85.841	ENSOCUG00000022008	SF3B6	86	85.841	Oryctolagus_cuniculus
ENSXCOG00000008477	sf3b6	88	85.841	ENSORLG00000015955	sf3b6	86	85.841	Oryzias_latipes
ENSXCOG00000008477	sf3b6	88	85.841	ENSORLG00020005875	sf3b6	86	85.841	Oryzias_latipes_hni
ENSXCOG00000008477	sf3b6	88	85.841	ENSORLG00015001347	sf3b6	86	85.841	Oryzias_latipes_hsok
ENSXCOG00000008477	sf3b6	88	86.726	ENSOMEG00000014506	sf3b6	86	86.726	Oryzias_melastigma
ENSXCOG00000008477	sf3b6	88	85.841	ENSOGAG00000004468	SF3B6	86	85.841	Otolemur_garnettii
ENSXCOG00000008477	sf3b6	88	85.841	ENSOARG00000017819	SF3B6	86	85.841	Ovis_aries
ENSXCOG00000008477	sf3b6	88	85.841	ENSPPAG00000027816	SF3B6	86	85.841	Pan_paniscus
ENSXCOG00000008477	sf3b6	88	85.841	ENSPPRG00000023257	SF3B6	86	85.841	Panthera_pardus
ENSXCOG00000008477	sf3b6	88	85.841	ENSPTIG00000013322	SF3B6	86	85.841	Panthera_tigris_altaica
ENSXCOG00000008477	sf3b6	88	85.841	ENSPTRG00000011709	SF3B6	86	85.841	Pan_troglodytes
ENSXCOG00000008477	sf3b6	88	85.841	ENSPANG00000021963	SF3B6	86	85.841	Papio_anubis
ENSXCOG00000008477	sf3b6	88	85.841	ENSPKIG00000012311	sf3b6	82	97.938	Paramormyrops_kingsleyae
ENSXCOG00000008477	sf3b6	80	84.466	ENSPSIG00000017115	SF3B6	84	84.466	Pelodiscus_sinensis
ENSXCOG00000008477	sf3b6	77	95.960	ENSPMGG00000014621	sf3b6	83	95.960	Periophthalmus_magnuspinnatus
ENSXCOG00000008477	sf3b6	88	85.841	ENSPEMG00000010308	Sf3b6	86	85.841	Peromyscus_maniculatus_bairdii
ENSXCOG00000008477	sf3b6	82	80.189	ENSPMAG00000006008	sf3b6	80	80.189	Petromyzon_marinus
ENSXCOG00000008477	sf3b6	75	75.258	ENSPCIG00000015858	-	78	75.258	Phascolarctos_cinereus
ENSXCOG00000008477	sf3b6	88	85.841	ENSPCIG00000022128	-	86	85.841	Phascolarctos_cinereus
ENSXCOG00000008477	sf3b6	88	87.611	ENSPFOG00000012494	sf3b6	86	87.611	Poecilia_formosa
ENSXCOG00000008477	sf3b6	92	84.874	ENSPLAG00000020460	sf3b6	90	84.874	Poecilia_latipinna
ENSXCOG00000008477	sf3b6	100	79.845	ENSPMEG00000004426	sf3b6	98	79.845	Poecilia_mexicana
ENSXCOG00000008477	sf3b6	88	85.841	ENSPPYG00000012603	SF3B6	86	85.841	Pongo_abelii
ENSXCOG00000008477	sf3b6	88	85.841	ENSPVAG00000011346	SF3B6	86	85.841	Pteropus_vampyrus
ENSXCOG00000008477	sf3b6	88	87.611	ENSPNYG00000021832	sf3b6	86	87.611	Pundamilia_nyererei
ENSXCOG00000008477	sf3b6	77	96.970	ENSPNAG00000008845	sf3b6	91	96.970	Pygocentrus_nattereri
ENSXCOG00000008477	sf3b6	88	70.796	ENSRNOG00000046172	Sf3b6	85	70.796	Rattus_norvegicus
ENSXCOG00000008477	sf3b6	88	85.841	ENSRBIG00000039598	SF3B6	86	85.841	Rhinopithecus_bieti
ENSXCOG00000008477	sf3b6	88	85.841	ENSRROG00000011368	SF3B6	86	85.841	Rhinopithecus_roxellana
ENSXCOG00000008477	sf3b6	88	85.841	ENSSBOG00000002914	SF3B6	86	85.841	Saimiri_boliviensis_boliviensis
ENSXCOG00000008477	sf3b6	88	85.841	ENSSFOG00015014370	sf3b6	86	85.841	Scleropages_formosus
ENSXCOG00000008477	sf3b6	88	85.841	ENSSMAG00000004566	sf3b6	86	85.841	Scophthalmus_maximus
ENSXCOG00000008477	sf3b6	88	87.611	ENSSDUG00000006538	sf3b6	86	87.611	Seriola_dumerili
ENSXCOG00000008477	sf3b6	88	87.611	ENSSLDG00000004494	sf3b6	86	87.611	Seriola_lalandi_dorsalis
ENSXCOG00000008477	sf3b6	88	85.841	ENSSARG00000011902	-	86	85.841	Sorex_araneus
ENSXCOG00000008477	sf3b6	88	85.841	ENSSPUG00000014919	SF3B6	86	85.841	Sphenodon_punctatus
ENSXCOG00000008477	sf3b6	88	87.611	ENSSPAG00000013201	sf3b6	86	87.611	Stegastes_partitus
ENSXCOG00000008477	sf3b6	88	85.841	ENSSSCG00000008587	SF3B6	86	85.841	Sus_scrofa
ENSXCOG00000008477	sf3b6	88	85.841	ENSTGUG00000013191	SF3B6	86	85.841	Taeniopygia_guttata
ENSXCOG00000008477	sf3b6	88	87.611	ENSTRUG00000025286	sf3b6	86	87.611	Takifugu_rubripes
ENSXCOG00000008477	sf3b6	88	87.611	ENSTNIG00000009719	sf3b6	86	87.611	Tetraodon_nigroviridis
ENSXCOG00000008477	sf3b6	80	84.466	ENSTBEG00000012532	SF3B6	84	84.466	Tupaia_belangeri
ENSXCOG00000008477	sf3b6	80	84.466	ENSTTRG00000013430	SF3B6	84	84.466	Tursiops_truncatus
ENSXCOG00000008477	sf3b6	88	85.841	ENSUAMG00000025329	SF3B6	86	85.841	Ursus_americanus
ENSXCOG00000008477	sf3b6	93	65.574	ENSUAMG00000000978	-	92	65.574	Ursus_americanus
ENSXCOG00000008477	sf3b6	88	85.841	ENSUMAG00000022835	SF3B6	86	85.841	Ursus_maritimus
ENSXCOG00000008477	sf3b6	80	84.466	ENSVPAG00000005546	SF3B6	84	84.466	Vicugna_pacos
ENSXCOG00000008477	sf3b6	88	85.841	ENSVVUG00000010874	SF3B6	86	85.841	Vulpes_vulpes
ENSXCOG00000008477	sf3b6	88	84.956	ENSXETG00000018204	sf3b6	86	84.956	Xenopus_tropicalis
ENSXCOG00000008477	sf3b6	88	87.611	ENSXMAG00000010747	sf3b6	89	100.000	Xiphophorus_maculatus