EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008517 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6029 bases
Position: chrKQ557225.1:8953219-8959247
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011270	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011401	-	963	-	ENSXCOP00000011270	320 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008517	-	52	56.548	ENSXCOG00000003913	-	87	56.548
ENSXCOG00000008517	-	58	45.026	ENSXCOG00000019639	-	73	45.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008517	-	57	51.087	ENSACIG00000004501	-	64	51.087	Amphilophus_citrinellus
ENSXCOG00000008517	-	57	49.457	ENSACIG00000015684	-	65	49.457	Amphilophus_citrinellus
ENSXCOG00000008517	-	62	50.500	ENSACIG00000000741	-	70	50.500	Amphilophus_citrinellus
ENSXCOG00000008517	-	62	45.050	ENSACIG00000004408	-	66	45.050	Amphilophus_citrinellus
ENSXCOG00000008517	-	66	46.948	ENSACIG00000004426	-	69	46.948	Amphilophus_citrinellus
ENSXCOG00000008517	-	61	48.744	ENSACIG00000015616	-	68	48.744	Amphilophus_citrinellus
ENSXCOG00000008517	-	52	48.810	ENSACIG00000004521	-	59	48.810	Amphilophus_citrinellus
ENSXCOG00000008517	-	60	45.641	ENSACIG00000004444	-	65	47.826	Amphilophus_citrinellus
ENSXCOG00000008517	-	63	53.659	ENSAOCG00000002056	-	67	53.659	Amphiprion_ocellaris
ENSXCOG00000008517	-	64	50.962	ENSAPEG00000021053	-	71	50.962	Amphiprion_percula
ENSXCOG00000008517	-	61	51.795	ENSATEG00000002869	-	68	51.795	Anabas_testudineus
ENSXCOG00000008517	-	63	47.087	ENSATEG00000002718	-	63	45.631	Anabas_testudineus
ENSXCOG00000008517	-	57	42.553	ENSACLG00000018321	-	65	47.872	Astatotilapia_calliptera
ENSXCOG00000008517	-	57	40.761	ENSACLG00000027615	-	67	40.761	Astatotilapia_calliptera
ENSXCOG00000008517	-	64	46.667	ENSACLG00000010292	-	73	46.667	Astatotilapia_calliptera
ENSXCOG00000008517	-	68	42.009	ENSACLG00000002020	-	83	42.009	Astatotilapia_calliptera
ENSXCOG00000008517	-	57	47.541	ENSACLG00000016487	-	60	47.541	Astatotilapia_calliptera
ENSXCOG00000008517	-	61	36.224	ENSACLG00000016390	-	68	36.224	Astatotilapia_calliptera
ENSXCOG00000008517	-	56	35.676	ENSAMXG00000037563	-	66	35.676	Astyanax_mexicanus
ENSXCOG00000008517	-	58	44.385	ENSCSEG00000018832	-	69	44.385	Cynoglossus_semilaevis
ENSXCOG00000008517	-	62	39.901	ENSCVAG00000016719	-	69	39.901	Cyprinodon_variegatus
ENSXCOG00000008517	-	54	46.893	ENSCVAG00000014640	-	81	46.893	Cyprinodon_variegatus
ENSXCOG00000008517	-	61	74.490	ENSCVAG00000023166	-	74	74.490	Cyprinodon_variegatus
ENSXCOG00000008517	-	66	36.279	ENSDARG00000107486	CR855320.3	71	36.279	Danio_rerio
ENSXCOG00000008517	-	58	37.629	ENSDARG00000095309	si:dkey-79f11.9	68	37.629	Danio_rerio
ENSXCOG00000008517	-	62	39.409	ENSDARG00000093857	si:dkey-79f11.10	66	38.140	Danio_rerio
ENSXCOG00000008517	-	53	41.618	ENSDARG00000092361	si:dkey-79f11.7	72	41.618	Danio_rerio
ENSXCOG00000008517	-	63	37.438	ENSDARG00000010729	CABZ01073795.1	69	37.438	Danio_rerio
ENSXCOG00000008517	-	58	49.198	ENSDARG00000015678	si:dkeyp-75b4.9	89	49.198	Danio_rerio
ENSXCOG00000008517	-	66	38.785	ENSDARG00000092634	CABZ01000634.1	71	38.785	Danio_rerio
ENSXCOG00000008517	-	66	40.000	ENSDARG00000095673	si:dkey-79f11.8	65	40.000	Danio_rerio
ENSXCOG00000008517	-	66	36.530	ENSDARG00000029720	si:dkeyp-9d4.2	72	37.443	Danio_rerio
ENSXCOG00000008517	-	52	44.379	ENSDARG00000075791	si:dkey-79f11.5	63	40.394	Danio_rerio
ENSXCOG00000008517	-	56	46.667	ENSFHEG00000018078	-	65	46.667	Fundulus_heteroclitus
ENSXCOG00000008517	-	60	45.876	ENSFHEG00000018069	-	65	45.876	Fundulus_heteroclitus
ENSXCOG00000008517	-	66	54.054	ENSFHEG00000019992	-	74	54.054	Fundulus_heteroclitus
ENSXCOG00000008517	-	64	52.404	ENSFHEG00000021105	-	69	52.404	Fundulus_heteroclitus
ENSXCOG00000008517	-	53	41.808	ENSGAFG00000019422	-	65	41.808	Gambusia_affinis
ENSXCOG00000008517	-	61	52.020	ENSGACG00000012556	-	62	52.020	Gasterosteus_aculeatus
ENSXCOG00000008517	-	61	51.515	ENSGACG00000012548	-	66	51.515	Gasterosteus_aculeatus
ENSXCOG00000008517	-	61	52.020	ENSGACG00000001319	-	72	52.020	Gasterosteus_aculeatus
ENSXCOG00000008517	-	55	47.753	ENSHBUG00000010945	-	65	47.753	Haplochromis_burtoni
ENSXCOG00000008517	-	61	40.201	ENSIPUG00000007632	-	56	40.201	Ictalurus_punctatus
ENSXCOG00000008517	-	60	43.814	ENSIPUG00000005624	-	70	43.814	Ictalurus_punctatus
ENSXCOG00000008517	-	57	37.363	ENSIPUG00000006725	-	85	39.205	Ictalurus_punctatus
ENSXCOG00000008517	-	61	40.704	ENSIPUG00000006852	-	61	40.704	Ictalurus_punctatus
ENSXCOG00000008517	-	56	50.276	ENSKMAG00000000369	-	68	50.276	Kryptolebias_marmoratus
ENSXCOG00000008517	-	58	50.267	ENSKMAG00000000325	-	67	50.267	Kryptolebias_marmoratus
ENSXCOG00000008517	-	56	68.508	ENSKMAG00000006729	-	67	68.508	Kryptolebias_marmoratus
ENSXCOG00000008517	-	57	51.630	ENSMAMG00000003570	-	64	51.630	Mastacembelus_armatus
ENSXCOG00000008517	-	62	44.390	ENSMAMG00000003546	-	66	44.390	Mastacembelus_armatus
ENSXCOG00000008517	-	57	48.404	ENSMZEG00005015498	-	65	48.404	Maylandia_zebra
ENSXCOG00000008517	-	57	45.109	ENSMZEG00005008301	-	68	45.109	Maylandia_zebra
ENSXCOG00000008517	-	57	46.196	ENSMZEG00005008329	-	69	46.196	Maylandia_zebra
ENSXCOG00000008517	-	58	45.213	ENSNBRG00000020806	-	62	45.213	Neolamprologus_brichardi
ENSXCOG00000008517	-	58	46.277	ENSNBRG00000020781	-	75	46.277	Neolamprologus_brichardi
ENSXCOG00000008517	-	57	46.809	ENSNBRG00000024253	-	62	46.809	Neolamprologus_brichardi
ENSXCOG00000008517	-	57	45.355	ENSNBRG00000022075	-	65	45.355	Neolamprologus_brichardi
ENSXCOG00000008517	-	58	45.213	ENSNBRG00000006386	-	70	45.213	Neolamprologus_brichardi
ENSXCOG00000008517	-	63	40.394	ENSNBRG00000006414	-	67	40.394	Neolamprologus_brichardi
ENSXCOG00000008517	-	65	44.601	ENSNBRG00000023290	-	69	44.601	Neolamprologus_brichardi
ENSXCOG00000008517	-	61	37.563	ENSNBRG00000020744	-	61	37.563	Neolamprologus_brichardi
ENSXCOG00000008517	-	59	46.667	ENSONIG00000018790	-	65	46.667	Oreochromis_niloticus
ENSXCOG00000008517	-	57	44.262	ENSONIG00000015371	-	70	44.262	Oreochromis_niloticus
ENSXCOG00000008517	-	51	49.697	ENSONIG00000013227	-	90	49.697	Oreochromis_niloticus
ENSXCOG00000008517	-	53	57.225	ENSONIG00000016843	-	69	57.225	Oreochromis_niloticus
ENSXCOG00000008517	-	61	45.960	ENSONIG00000015167	-	70	48.087	Oreochromis_niloticus
ENSXCOG00000008517	-	58	45.213	ENSONIG00000012319	-	71	45.213	Oreochromis_niloticus
ENSXCOG00000008517	-	53	47.126	ENSONIG00000012317	-	69	47.126	Oreochromis_niloticus
ENSXCOG00000008517	-	58	46.032	ENSONIG00000015247	-	66	46.032	Oreochromis_niloticus
ENSXCOG00000008517	-	57	46.196	ENSONIG00000017465	-	73	46.196	Oreochromis_niloticus
ENSXCOG00000008517	-	58	49.189	ENSPMGG00000012906	-	64	49.189	Periophthalmus_magnuspinnatus
ENSXCOG00000008517	-	64	49.048	ENSPMGG00000004994	-	70	49.048	Periophthalmus_magnuspinnatus
ENSXCOG00000008517	-	60	51.795	ENSPMGG00000002695	-	73	51.795	Periophthalmus_magnuspinnatus
ENSXCOG00000008517	-	64	51.691	ENSPMGG00000022341	-	60	51.691	Periophthalmus_magnuspinnatus
ENSXCOG00000008517	-	63	44.175	ENSPFOG00000015382	-	70	44.175	Poecilia_formosa
ENSXCOG00000008517	-	68	70.000	ENSPFOG00000003807	-	76	70.000	Poecilia_formosa
ENSXCOG00000008517	-	64	41.905	ENSPFOG00000015493	-	71	41.905	Poecilia_formosa
ENSXCOG00000008517	-	60	70.256	ENSPFOG00000003841	-	67	70.000	Poecilia_formosa
ENSXCOG00000008517	-	65	44.019	ENSPFOG00000015455	-	68	44.019	Poecilia_formosa
ENSXCOG00000008517	-	57	54.595	ENSPLAG00000018274	-	64	54.595	Poecilia_latipinna
ENSXCOG00000008517	-	63	44.175	ENSPMEG00000018635	-	70	44.175	Poecilia_mexicana
ENSXCOG00000008517	-	58	45.405	ENSPMEG00000018626	-	65	45.405	Poecilia_mexicana
ENSXCOG00000008517	-	66	63.380	ENSPREG00000005137	-	72	63.158	Poecilia_reticulata
ENSXCOG00000008517	-	60	43.523	ENSPNYG00000024019	-	64	43.523	Pundamilia_nyererei
ENSXCOG00000008517	-	61	45.366	ENSPNYG00000005478	-	71	45.366	Pundamilia_nyererei
ENSXCOG00000008517	-	67	44.796	ENSPNYG00000001584	-	73	44.796	Pundamilia_nyererei
ENSXCOG00000008517	-	63	35.648	ENSPNAG00000006327	-	51	35.648	Pygocentrus_nattereri
ENSXCOG00000008517	-	61	40.404	ENSPNAG00000009266	-	71	40.404	Pygocentrus_nattereri
ENSXCOG00000008517	-	61	44.670	ENSSDUG00000002359	-	72	44.670	Seriola_dumerili
ENSXCOG00000008517	-	61	45.960	ENSSDUG00000002417	-	72	45.960	Seriola_dumerili
ENSXCOG00000008517	-	63	46.569	ENSSLDG00000008952	-	70	46.569	Seriola_lalandi_dorsalis
ENSXCOG00000008517	-	61	62.755	ENSSLDG00000016397	-	71	62.755	Seriola_lalandi_dorsalis
ENSXCOG00000008517	-	66	49.765	ENSSPAG00000012856	-	74	49.765	Stegastes_partitus
ENSXCOG00000008517	-	58	51.579	ENSSPAG00000012915	-	71	51.579	Stegastes_partitus
ENSXCOG00000008517	-	62	43.350	ENSXMAG00000009973	-	68	43.523	Xiphophorus_maculatus
ENSXCOG00000008517	-	62	57.426	ENSXMAG00000029117	-	71	57.426	Xiphophorus_maculatus