EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008579 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 11314 bases
Position: chrKQ557224.1:5886862-5898175
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011352	RRM_1	PF00076.22	6.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011483	-	1131	-	ENSXCOP00000011352	376 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008579	-	94	81.232	ENSXCOG00000006122	cpeb3	56	81.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008579	-	94	83.051	ENSG00000113742	CPEB4	100	87.021	Homo_sapiens
ENSXCOG00000008579	-	93	81.717	ENSAPOG00000006896	cpeb4a	100	82.991	Acanthochromis_polyacanthus
ENSXCOG00000008579	-	93	83.569	ENSAOCG00000015830	cpeb4a	100	82.991	Amphiprion_ocellaris
ENSXCOG00000008579	-	93	81.667	ENSAPEG00000011894	cpeb4a	100	82.991	Amphiprion_percula
ENSXCOG00000008579	-	81	93.160	ENSACAG00000012015	-	100	93.160	Anolis_carolinensis
ENSXCOG00000008579	-	94	83.898	ENSAMXG00000013453	-	88	83.898	Astyanax_mexicanus
ENSXCOG00000008579	-	94	84.746	ENSBTAG00000009995	CPEB4	100	84.956	Bos_taurus
ENSXCOG00000008579	-	59	89.140	ENSCAPG00000009045	-	97	89.140	Cavia_aperea
ENSXCOG00000008579	-	73	83.333	ENSCPOG00000015530	CPEB4	86	83.333	Cavia_porcellus
ENSXCOG00000008579	-	94	82.022	ENSDARG00000056691	cpeb4a	53	81.742	Danio_rerio
ENSXCOG00000008579	-	94	77.311	ENSEBUG00000008330	-	95	77.337	Eptatretus_burgeri
ENSXCOG00000008579	-	94	82.873	ENSECAG00000016921	CPEB4	52	82.873	Equus_caballus
ENSXCOG00000008579	-	94	82.873	ENSEEUG00000010887	CPEB4	54	82.873	Erinaceus_europaeus
ENSXCOG00000008579	-	92	83.862	ENSELUG00000005282	cpeb4a	99	83.591	Esox_lucius
ENSXCOG00000008579	-	94	84.463	ENSELUG00000022898	CPEB4	50	82.597	Esox_lucius
ENSXCOG00000008579	-	94	84.746	ENSFDAG00000011935	CPEB4	90	84.746	Fukomys_damarensis
ENSXCOG00000008579	-	93	83.286	ENSGACG00000018422	cpeb4a	88	83.286	Gasterosteus_aculeatus
ENSXCOG00000008579	-	94	84.746	ENSHGLG00000008897	CPEB4	51	79.019	Heterocephalus_glaber_female
ENSXCOG00000008579	-	93	83.807	ENSHCOG00000003707	cpeb4a	100	82.991	Hippocampus_comes
ENSXCOG00000008579	-	94	84.314	ENSIPUG00000010268	cpeb4a	50	82.466	Ictalurus_punctatus
ENSXCOG00000008579	-	94	84.746	ENSJJAG00000021518	Cpeb4	90	84.746	Jaculus_jaculus
ENSXCOG00000008579	-	78	93.898	ENSLBEG00000027947	-	100	93.898	Labrus_bergylta
ENSXCOG00000008579	-	93	83.523	ENSLBEG00000022823	cpeb4a	100	82.991	Labrus_bergylta
ENSXCOG00000008579	-	79	95.973	ENSLACG00000010027	-	96	96.026	Latimeria_chalumnae
ENSXCOG00000008579	-	93	80.966	ENSMZEG00005008957	cpeb4a	100	82.111	Maylandia_zebra
ENSXCOG00000008579	-	93	85.470	ENSMAUG00000011128	Cpeb4	89	85.470	Mesocricetus_auratus
ENSXCOG00000008579	-	93	85.470	ENSMOCG00000022941	Cpeb4	89	85.470	Microtus_ochrogaster
ENSXCOG00000008579	-	94	84.463	MGP_CAROLIEiJ_G0016172	Cpeb4	90	84.463	Mus_caroli
ENSXCOG00000008579	-	94	84.463	ENSMUSG00000020300	Cpeb4	90	84.463	Mus_musculus
ENSXCOG00000008579	-	94	84.746	MGP_PahariEiJ_G0017307	Cpeb4	90	84.746	Mus_pahari
ENSXCOG00000008579	-	94	84.463	MGP_SPRETEiJ_G0017016	Cpeb4	90	84.463	Mus_spretus
ENSXCOG00000008579	-	90	84.956	ENSMLUG00000014640	-	100	84.956	Myotis_lucifugus
ENSXCOG00000008579	-	94	84.746	ENSNGAG00000010735	Cpeb4	90	84.746	Nannospalax_galili
ENSXCOG00000008579	-	93	86.313	ENSMEUG00000008074	-	100	86.872	Notamacropus_eugenii
ENSXCOG00000008579	-	94	84.746	ENSODEG00000001934	CPEB4	90	84.746	Octodon_degus
ENSXCOG00000008579	-	93	80.780	ENSORLG00000007328	cpeb4a	100	81.818	Oryzias_latipes
ENSXCOG00000008579	-	93	80.501	ENSORLG00015006236	cpeb4a	100	81.818	Oryzias_latipes_hsok
ENSXCOG00000008579	-	93	80.501	ENSOMEG00000011206	cpeb4a	100	81.818	Oryzias_melastigma
ENSXCOG00000008579	-	94	83.051	ENSPPRG00000001603	CPEB4	100	87.021	Panthera_pardus
ENSXCOG00000008579	-	94	82.768	ENSPTIG00000015408	CPEB4	100	86.726	Panthera_tigris_altaica
ENSXCOG00000008579	-	93	85.429	ENSPKIG00000007012	cpeb4a	50	82.873	Paramormyrops_kingsleyae
ENSXCOG00000008579	-	93	84.314	ENSPKIG00000009006	CPEB4	50	83.471	Paramormyrops_kingsleyae
ENSXCOG00000008579	-	95	84.314	ENSPMGG00000007127	CPEB4	66	84.314	Periophthalmus_magnuspinnatus
ENSXCOG00000008579	-	80	88.487	ENSPMAG00000004652	cpeb4a	94	89.145	Petromyzon_marinus
ENSXCOG00000008579	-	94	82.597	ENSPCIG00000015843	CPEB4	50	80.376	Phascolarctos_cinereus
ENSXCOG00000008579	-	90	82.991	ENSPLAG00000017182	cpeb4a	100	82.991	Poecilia_latipinna
ENSXCOG00000008579	-	93	84.375	ENSPMEG00000003483	cpeb4a	100	82.991	Poecilia_mexicana
ENSXCOG00000008579	-	93	92.286	ENSSHAG00000009862	-	100	92.286	Sarcophilus_harrisii
ENSXCOG00000008579	-	93	83.807	ENSSMAG00000008812	cpeb4a	100	83.284	Scophthalmus_maximus
ENSXCOG00000008579	-	90	83.284	ENSSLDG00000003652	cpeb4a	100	83.284	Seriola_lalandi_dorsalis
ENSXCOG00000008579	-	94	81.096	ENSTGUG00000000329	CPEB4	50	81.096	Taeniopygia_guttata
ENSXCOG00000008579	-	81	87.213	ENSTNIG00000004021	-	98	87.213	Tetraodon_nigroviridis
ENSXCOG00000008579	-	93	82.271	ENSTNIG00000017077	cpeb4a	56	82.271	Tetraodon_nigroviridis
ENSXCOG00000008579	-	93	84.375	ENSXMAG00000010247	cpeb4a	100	82.991	Xiphophorus_maculatus