EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008734 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 10986 bases
Position: chrKQ557224.1:29542727-29553712
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011577	MMR_HSR1	PF01926.23	9.3e-06	1	1
ENSXCOP00000011581	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011709	-	1338	-	ENSXCOP00000011577	445 (aa)	-	-
ENSXCOT00000011713	-	1383	-	ENSXCOP00000011581	460 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008734	-	98	65.207	ENSXCOG00000006325	-	98	64.896
ENSXCOG00000008734	-	98	49.887	ENSXCOG00000014178	zgc:153654	93	49.887

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008734	-	97	69.515	ENSAPOG00000011126	-	90	69.515	Acanthochromis_polyacanthus
ENSXCOG00000008734	-	97	50.115	ENSAPOG00000000010	zgc:153654	94	50.115	Acanthochromis_polyacanthus
ENSXCOG00000008734	-	96	66.667	ENSACIG00000009430	-	96	66.667	Amphilophus_citrinellus
ENSXCOG00000008734	-	98	51.264	ENSACIG00000018021	zgc:153654	98	51.264	Amphilophus_citrinellus
ENSXCOG00000008734	-	64	67.133	ENSACIG00000023205	-	96	67.133	Amphilophus_citrinellus
ENSXCOG00000008734	-	97	70.439	ENSAOCG00000008818	si:ch211-197g15.10	96	70.439	Amphiprion_ocellaris
ENSXCOG00000008734	-	97	51.843	ENSAOCG00000011919	zgc:153654	92	51.843	Amphiprion_ocellaris
ENSXCOG00000008734	-	97	69.977	ENSAPEG00000006547	si:ch211-197g15.10	97	69.195	Amphiprion_percula
ENSXCOG00000008734	-	97	51.843	ENSAPEG00000012978	zgc:153654	92	51.843	Amphiprion_percula
ENSXCOG00000008734	-	97	52.083	ENSATEG00000008195	zgc:153654	95	52.083	Anabas_testudineus
ENSXCOG00000008734	-	97	66.667	ENSATEG00000016811	-	97	66.667	Anabas_testudineus
ENSXCOG00000008734	-	96	62.850	ENSATEG00000016818	-	94	62.850	Anabas_testudineus
ENSXCOG00000008734	-	97	63.048	ENSATEG00000016831	-	95	63.048	Anabas_testudineus
ENSXCOG00000008734	-	97	66.513	ENSATEG00000016836	-	98	65.315	Anabas_testudineus
ENSXCOG00000008734	-	97	66.282	ENSACLG00000013499	-	98	66.359	Astatotilapia_calliptera
ENSXCOG00000008734	-	97	66.051	ENSACLG00000021969	-	98	66.207	Astatotilapia_calliptera
ENSXCOG00000008734	-	97	65.589	ENSACLG00000022167	-	98	65.287	Astatotilapia_calliptera
ENSXCOG00000008734	-	98	50.575	ENSACLG00000009420	zgc:153654	92	50.575	Astatotilapia_calliptera
ENSXCOG00000008734	-	97	64.896	ENSACLG00000022141	-	95	65.438	Astatotilapia_calliptera
ENSXCOG00000008734	-	98	53.273	ENSAMXG00000031541	-	99	53.273	Astyanax_mexicanus
ENSXCOG00000008734	-	98	51.136	ENSAMXG00000002119	-	98	51.136	Astyanax_mexicanus
ENSXCOG00000008734	-	98	49.091	ENSCPBG00000016962	-	97	49.886	Chrysemys_picta_bellii
ENSXCOG00000008734	-	73	66.565	ENSCVAG00000004989	-	100	66.565	Cyprinodon_variegatus
ENSXCOG00000008734	-	97	66.055	ENSCVAG00000010378	-	97	66.055	Cyprinodon_variegatus
ENSXCOG00000008734	-	97	49.885	ENSCVAG00000013437	zgc:153654	92	49.885	Cyprinodon_variegatus
ENSXCOG00000008734	-	97	69.977	ENSCVAG00000000405	-	96	70.046	Cyprinodon_variegatus
ENSXCOG00000008734	-	98	67.963	ENSCVAG00000000409	-	95	67.963	Cyprinodon_variegatus
ENSXCOG00000008734	-	97	68.822	ENSCVAG00000015674	-	97	68.894	Cyprinodon_variegatus
ENSXCOG00000008734	-	98	53.499	ENSDARG00000071355	si:ch211-197g15.7	98	60.000	Danio_rerio
ENSXCOG00000008734	-	97	55.149	ENSDARG00000002293	si:ch211-197g15.6	96	55.271	Danio_rerio
ENSXCOG00000008734	-	97	49.772	ENSDARG00000094984	si:ch211-197g15.8	98	49.772	Danio_rerio
ENSXCOG00000008734	-	96	53.483	ENSDARG00000071361	si:ch211-197g15.10	97	53.509	Danio_rerio
ENSXCOG00000008734	-	97	50.917	ENSDARG00000060322	zgc:153654	97	50.917	Danio_rerio
ENSXCOG00000008734	-	98	50.905	ENSDARG00000092883	si:dkey-193b15.5	98	50.905	Danio_rerio
ENSXCOG00000008734	-	67	56.106	ENSDARG00000094747	si:ch211-197g15.6	90	56.106	Danio_rerio
ENSXCOG00000008734	-	98	54.128	ENSDARG00000009673	si:ch211-197g15.6	91	53.986	Danio_rerio
ENSXCOG00000008734	-	97	53.211	ENSELUG00000008265	zgc:153654	96	53.211	Esox_lucius
ENSXCOG00000008734	-	98	57.208	ENSELUG00000013242	si:ch211-197g15.10	98	57.373	Esox_lucius
ENSXCOG00000008734	-	60	64.286	ENSFHEG00000019876	-	97	64.925	Fundulus_heteroclitus
ENSXCOG00000008734	-	97	66.744	ENSFHEG00000013876	-	97	65.589	Fundulus_heteroclitus
ENSXCOG00000008734	-	97	67.667	ENSFHEG00000019903	-	97	67.667	Fundulus_heteroclitus
ENSXCOG00000008734	-	97	52.304	ENSFHEG00000009844	zgc:153654	94	52.304	Fundulus_heteroclitus
ENSXCOG00000008734	-	86	45.455	ENSGMOG00000012872	-	99	45.596	Gadus_morhua
ENSXCOG00000008734	-	97	91.686	ENSGAFG00000007761	-	97	91.686	Gambusia_affinis
ENSXCOG00000008734	-	98	51.259	ENSGAFG00000019143	zgc:153654	91	51.259	Gambusia_affinis
ENSXCOG00000008734	-	98	60.230	ENSGACG00000007958	si:ch211-197g15.10	99	59.865	Gasterosteus_aculeatus
ENSXCOG00000008734	-	98	48.970	ENSGACG00000009755	zgc:153654	96	48.970	Gasterosteus_aculeatus
ENSXCOG00000008734	-	98	48.636	ENSGAGG00000022623	-	97	49.431	Gopherus_agassizii
ENSXCOG00000008734	-	97	66.975	ENSHBUG00000001391	-	99	65.695	Haplochromis_burtoni
ENSXCOG00000008734	-	98	50.801	ENSHBUG00000008124	zgc:153654	93	50.801	Haplochromis_burtoni
ENSXCOG00000008734	-	97	66.282	ENSHBUG00000018097	-	98	66.129	Haplochromis_burtoni
ENSXCOG00000008734	-	96	51.919	ENSIPUG00000025096	si:ch211-197g15.6	93	51.919	Ictalurus_punctatus
ENSXCOG00000008734	-	97	50.229	ENSIPUG00000014380	zgc:153654	98	50.229	Ictalurus_punctatus
ENSXCOG00000008734	-	98	50.457	ENSKMAG00000013818	zgc:153654	94	50.457	Kryptolebias_marmoratus
ENSXCOG00000008734	-	97	66.744	ENSKMAG00000004691	si:ch211-197g15.10	100	68.483	Kryptolebias_marmoratus
ENSXCOG00000008734	-	99	63.265	ENSLBEG00000027620	si:ch211-197g15.10	99	62.980	Labrus_bergylta
ENSXCOG00000008734	-	65	65.972	ENSMAMG00000006527	-	97	65.972	Mastacembelus_armatus
ENSXCOG00000008734	-	98	65.596	ENSMAMG00000006478	-	97	65.808	Mastacembelus_armatus
ENSXCOG00000008734	-	97	50.115	ENSMAMG00000002775	zgc:153654	92	50.115	Mastacembelus_armatus
ENSXCOG00000008734	-	60	62.030	ENSMAMG00000006464	-	99	60.650	Mastacembelus_armatus
ENSXCOG00000008734	-	99	66.063	ENSMAMG00000006432	-	99	66.063	Mastacembelus_armatus
ENSXCOG00000008734	-	97	66.282	ENSMZEG00005009847	-	91	66.359	Maylandia_zebra
ENSXCOG00000008734	-	98	50.229	ENSMZEG00005000213	zgc:153654	93	50.229	Maylandia_zebra
ENSXCOG00000008734	-	98	65.596	ENSMZEG00005016305	-	97	65.596	Maylandia_zebra
ENSXCOG00000008734	-	97	66.282	ENSMZEG00005016191	-	98	66.437	Maylandia_zebra
ENSXCOG00000008734	-	97	64.203	ENSMZEG00005016298	-	95	64.747	Maylandia_zebra
ENSXCOG00000008734	-	97	50.691	ENSMMOG00000008706	zgc:153654	93	50.691	Mola_mola
ENSXCOG00000008734	-	97	48.260	ENSMALG00000010184	zgc:153654	95	48.260	Monopterus_albus
ENSXCOG00000008734	-	97	65.358	ENSMALG00000017812	-	99	64.350	Monopterus_albus
ENSXCOG00000008734	-	97	63.953	ENSNBRG00000022795	-	98	64.286	Neolamprologus_brichardi
ENSXCOG00000008734	-	98	50.459	ENSNBRG00000021369	zgc:153654	93	50.459	Neolamprologus_brichardi
ENSXCOG00000008734	-	97	65.358	ENSNBRG00000021865	-	97	65.022	Neolamprologus_brichardi
ENSXCOG00000008734	-	98	64.516	ENSNBRG00000021454	-	97	65.268	Neolamprologus_brichardi
ENSXCOG00000008734	-	98	65.668	ENSNBRG00000021762	-	98	65.517	Neolamprologus_brichardi
ENSXCOG00000008734	-	98	63.678	ENSNBRG00000021612	-	97	63.529	Neolamprologus_brichardi
ENSXCOG00000008734	-	97	65.127	ENSONIG00000014147	-	99	64.108	Oreochromis_niloticus
ENSXCOG00000008734	-	98	64.692	ENSONIG00000012749	-	93	64.692	Oreochromis_niloticus
ENSXCOG00000008734	-	98	51.253	ENSONIG00000001120	zgc:153654	93	50.917	Oreochromis_niloticus
ENSXCOG00000008734	-	97	66.051	ENSORLG00000000696	-	99	64.706	Oryzias_latipes
ENSXCOG00000008734	-	97	61.136	ENSORLG00000027011	-	99	61.136	Oryzias_latipes
ENSXCOG00000008734	-	98	60.407	ENSORLG00000030184	-	99	60.407	Oryzias_latipes
ENSXCOG00000008734	-	97	66.051	ENSORLG00000008608	-	99	64.480	Oryzias_latipes
ENSXCOG00000008734	-	65	58.333	ENSORLG00020014413	-	97	58.333	Oryzias_latipes_hni
ENSXCOG00000008734	-	98	60.181	ENSORLG00020014470	-	99	60.455	Oryzias_latipes_hni
ENSXCOG00000008734	-	97	67.206	ENSORLG00020014451	-	97	67.206	Oryzias_latipes_hni
ENSXCOG00000008734	-	97	61.136	ENSORLG00015009930	-	99	61.136	Oryzias_latipes_hsok
ENSXCOG00000008734	-	56	60.800	ENSORLG00015009911	-	99	60.800	Oryzias_latipes_hsok
ENSXCOG00000008734	-	97	66.513	ENSORLG00015000293	-	99	65.385	Oryzias_latipes_hsok
ENSXCOG00000008734	-	97	65.589	ENSORLG00015009699	-	99	64.253	Oryzias_latipes_hsok
ENSXCOG00000008734	-	97	67.206	ENSORLG00015009849	-	98	67.206	Oryzias_latipes_hsok
ENSXCOG00000008734	-	98	66.284	ENSORLG00015015397	-	96	66.284	Oryzias_latipes_hsok
ENSXCOG00000008734	-	97	57.466	ENSOMEG00000004075	-	98	57.466	Oryzias_melastigma
ENSXCOG00000008734	-	96	58.447	ENSOMEG00000004005	-	99	58.447	Oryzias_melastigma
ENSXCOG00000008734	-	98	49.775	ENSOMEG00000004053	-	99	50.225	Oryzias_melastigma
ENSXCOG00000008734	-	62	54.710	ENSOMEG00000003821	-	95	54.710	Oryzias_melastigma
ENSXCOG00000008734	-	56	72.000	ENSOMEG00000020481	-	99	72.000	Oryzias_melastigma
ENSXCOG00000008734	-	98	57.919	ENSOMEG00000003940	-	99	59.744	Oryzias_melastigma
ENSXCOG00000008734	-	97	69.444	ENSOMEG00000004183	-	98	68.966	Oryzias_melastigma
ENSXCOG00000008734	-	99	67.342	ENSOMEG00000004201	-	99	67.342	Oryzias_melastigma
ENSXCOG00000008734	-	99	66.216	ENSOMEG00000000087	-	99	66.216	Oryzias_melastigma
ENSXCOG00000008734	-	99	62.368	ENSOMEG00000003837	-	97	63.002	Oryzias_melastigma
ENSXCOG00000008734	-	98	57.336	ENSOMEG00000003965	-	98	57.336	Oryzias_melastigma
ENSXCOG00000008734	-	97	58.409	ENSOMEG00000004019	-	95	58.409	Oryzias_melastigma
ENSXCOG00000008734	-	64	42.105	ENSPKIG00000018532	-	94	42.857	Paramormyrops_kingsleyae
ENSXCOG00000008734	-	61	44.853	ENSPKIG00000018649	-	94	44.928	Paramormyrops_kingsleyae
ENSXCOG00000008734	-	61	48.718	ENSPKIG00000018587	-	91	48.905	Paramormyrops_kingsleyae
ENSXCOG00000008734	-	65	47.079	ENSPKIG00000020057	-	97	47.931	Paramormyrops_kingsleyae
ENSXCOG00000008734	-	62	50.909	ENSPKIG00000020074	-	93	52.015	Paramormyrops_kingsleyae
ENSXCOG00000008734	-	61	51.471	ENSPKIG00000018686	-	93	51.095	Paramormyrops_kingsleyae
ENSXCOG00000008734	-	58	41.288	ENSPKIG00000020102	-	96	41.288	Paramormyrops_kingsleyae
ENSXCOG00000008734	-	61	46.886	ENSPKIG00000018512	-	92	45.848	Paramormyrops_kingsleyae
ENSXCOG00000008734	-	97	45.642	ENSPSIG00000002607	-	97	45.642	Pelodiscus_sinensis
ENSXCOG00000008734	-	67	40.134	ENSPMGG00000000928	zgc:153654	93	42.475	Periophthalmus_magnuspinnatus
ENSXCOG00000008734	-	96	41.798	ENSPMAG00000000471	-	96	41.798	Petromyzon_marinus
ENSXCOG00000008734	-	97	87.671	ENSPFOG00000011182	-	97	87.671	Poecilia_formosa
ENSXCOG00000008734	-	64	65.734	ENSPFOG00000015594	-	99	65.845	Poecilia_formosa
ENSXCOG00000008734	-	98	50.567	ENSPFOG00000014250	zgc:153654	96	50.567	Poecilia_formosa
ENSXCOG00000008734	-	62	71.739	ENSPFOG00000000122	-	100	70.956	Poecilia_formosa
ENSXCOG00000008734	-	99	64.865	ENSPFOG00000000111	-	99	64.865	Poecilia_formosa
ENSXCOG00000008734	-	97	68.192	ENSPFOG00000022999	-	99	68.192	Poecilia_formosa
ENSXCOG00000008734	-	67	69.767	ENSPLAG00000001301	-	65	68.910	Poecilia_latipinna
ENSXCOG00000008734	-	99	65.158	ENSPLAG00000001307	-	99	65.158	Poecilia_latipinna
ENSXCOG00000008734	-	97	68.421	ENSPLAG00000001304	-	99	67.111	Poecilia_latipinna
ENSXCOG00000008734	-	60	66.045	ENSPLAG00000014458	-	98	65.556	Poecilia_latipinna
ENSXCOG00000008734	-	97	88.453	ENSPLAG00000021480	-	97	88.453	Poecilia_latipinna
ENSXCOG00000008734	-	98	50.688	ENSPLAG00000007998	zgc:153654	93	50.688	Poecilia_latipinna
ENSXCOG00000008734	-	97	88.453	ENSPMEG00000006889	-	97	88.453	Poecilia_mexicana
ENSXCOG00000008734	-	98	50.801	ENSPMEG00000003409	zgc:153654	93	50.801	Poecilia_mexicana
ENSXCOG00000008734	-	99	64.480	ENSPMEG00000013357	-	99	64.480	Poecilia_mexicana
ENSXCOG00000008734	-	65	67.474	ENSPMEG00000013339	-	97	67.474	Poecilia_mexicana
ENSXCOG00000008734	-	67	69.767	ENSPMEG00000013347	-	65	68.590	Poecilia_mexicana
ENSXCOG00000008734	-	60	66.418	ENSPMEG00000016192	-	93	66.296	Poecilia_mexicana
ENSXCOG00000008734	-	67	70.100	ENSPREG00000011808	-	65	68.910	Poecilia_reticulata
ENSXCOG00000008734	-	62	63.538	ENSPREG00000011848	-	93	64.029	Poecilia_reticulata
ENSXCOG00000008734	-	98	49.657	ENSPREG00000010723	zgc:153654	93	49.657	Poecilia_reticulata
ENSXCOG00000008734	-	99	64.172	ENSPREG00000011892	-	95	64.665	Poecilia_reticulata
ENSXCOG00000008734	-	97	88.453	ENSPREG00000009457	-	97	88.453	Poecilia_reticulata
ENSXCOG00000008734	-	98	65.826	ENSPNYG00000016375	-	93	69.751	Pundamilia_nyererei
ENSXCOG00000008734	-	97	66.051	ENSPNYG00000014740	-	98	66.129	Pundamilia_nyererei
ENSXCOG00000008734	-	98	50.345	ENSPNYG00000013106	zgc:153654	92	50.345	Pundamilia_nyererei
ENSXCOG00000008734	-	97	53.211	ENSPNAG00000013999	zgc:153654	99	53.211	Pygocentrus_nattereri
ENSXCOG00000008734	-	57	45.174	ENSSFOG00015022102	-	90	45.174	Scleropages_formosus
ENSXCOG00000008734	-	64	47.126	ENSSFOG00015018249	-	97	53.333	Scleropages_formosus
ENSXCOG00000008734	-	99	67.421	ENSSDUG00000009840	-	99	67.421	Seriola_dumerili
ENSXCOG00000008734	-	63	69.534	ENSSDUG00000009870	-	94	69.892	Seriola_dumerili
ENSXCOG00000008734	-	97	50.115	ENSSDUG00000012708	zgc:153654	92	50.463	Seriola_dumerili
ENSXCOG00000008734	-	97	50.577	ENSSLDG00000022597	zgc:153654	92	50.926	Seriola_lalandi_dorsalis
ENSXCOG00000008734	-	98	62.844	ENSSLDG00000001629	-	98	62.844	Seriola_lalandi_dorsalis
ENSXCOG00000008734	-	64	68.056	ENSSLDG00000001591	-	83	68.056	Seriola_lalandi_dorsalis
ENSXCOG00000008734	-	98	47.273	ENSSPUG00000010680	-	99	48.252	Sphenodon_punctatus
ENSXCOG00000008734	-	64	55.477	ENSSPAG00000007037	-	96	56.098	Stegastes_partitus
ENSXCOG00000008734	-	61	71.481	ENSSPAG00000005921	-	90	71.481	Stegastes_partitus
ENSXCOG00000008734	-	97	50.577	ENSSPAG00000018073	zgc:153654	94	50.577	Stegastes_partitus
ENSXCOG00000008734	-	90	48.642	ENSTRUG00000016083	-	82	48.889	Takifugu_rubripes
ENSXCOG00000008734	-	63	45.936	ENSTNIG00000017187	zgc:153654	99	45.936	Tetraodon_nigroviridis
ENSXCOG00000008734	-	97	97.229	ENSXMAG00000002325	-	97	97.229	Xiphophorus_maculatus
ENSXCOG00000008734	-	98	50.459	ENSXMAG00000010193	zgc:153654	93	50.459	Xiphophorus_maculatus
ENSXCOG00000008734	-	97	65.127	ENSXMAG00000002467	-	97	65.127	Xiphophorus_maculatus
ENSXCOG00000008734	-	67	68.771	ENSXMAG00000028256	-	66	67.308	Xiphophorus_maculatus