EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008759 (Gene tree)
Gene ID: -
Gene Symbol: trub2
Alias: fc51e05|wu:fc51e05|zgc:91836
Full Name: TruB pseudouridine (psi) synthase family member 2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2521 bases
Position: chrKQ557213.1:14636223-14638743
Accession: ZDB-GENE-040704-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011607	TruB_N	PF01509.18	2.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011739	-	1011	-	ENSXCOP00000011607	336 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008759's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008759's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008759	trub2	63	34.419	ENSXCOG00000017847	trub1	69	33.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008759	trub2	83	55.755	ENSG00000167112	TRUB2	84	55.755	Homo_sapiens
ENSXCOG00000008759	trub2	76	72.353	ENSAPOG00000018284	-	94	72.353	Acanthochromis_polyacanthus
ENSXCOG00000008759	trub2	73	75.000	ENSAPOG00000015733	trub2	88	75.000	Acanthochromis_polyacanthus
ENSXCOG00000008759	trub2	51	68.539	ENSAPOG00000018216	-	85	68.539	Acanthochromis_polyacanthus
ENSXCOG00000008759	trub2	84	56.690	ENSAMEG00000015395	TRUB2	85	56.690	Ailuropoda_melanoleuca
ENSXCOG00000008759	trub2	97	72.393	ENSACIG00000016500	trub2	99	72.393	Amphilophus_citrinellus
ENSXCOG00000008759	trub2	97	73.394	ENSAOCG00000002330	trub2	96	73.394	Amphiprion_ocellaris
ENSXCOG00000008759	trub2	97	73.394	ENSAPEG00000013177	trub2	96	73.394	Amphiprion_percula
ENSXCOG00000008759	trub2	89	73.244	ENSATEG00000011371	trub2	92	74.570	Anabas_testudineus
ENSXCOG00000008759	trub2	83	51.246	ENSAPLG00000009254	TRUB2	89	52.000	Anas_platyrhynchos
ENSXCOG00000008759	trub2	84	53.357	ENSACAG00000007331	TRUB2	86	53.357	Anolis_carolinensis
ENSXCOG00000008759	trub2	83	56.475	ENSANAG00000036234	TRUB2	90	56.071	Aotus_nancymaae
ENSXCOG00000008759	trub2	97	71.385	ENSACLG00000010793	trub2	98	71.385	Astatotilapia_calliptera
ENSXCOG00000008759	trub2	89	60.596	ENSAMXG00000031679	trub2	83	61.856	Astyanax_mexicanus
ENSXCOG00000008759	trub2	83	55.755	ENSCJAG00000020009	TRUB2	84	55.357	Callithrix_jacchus
ENSXCOG00000008759	trub2	86	53.559	ENSCAFG00000020068	TRUB2	84	55.396	Canis_familiaris
ENSXCOG00000008759	trub2	51	54.651	ENSCAFG00020017325	-	96	54.651	Canis_lupus_dingo
ENSXCOG00000008759	trub2	83	54.839	ENSCHIG00000021160	TRUB2	84	54.839	Capra_hircus
ENSXCOG00000008759	trub2	83	56.738	ENSTSYG00000034163	TRUB2	84	56.738	Carlito_syrichta
ENSXCOG00000008759	trub2	74	54.032	ENSCAPG00000000223	TRUB2	89	50.000	Cavia_aperea
ENSXCOG00000008759	trub2	86	54.861	ENSCPOG00000013535	TRUB2	91	52.222	Cavia_porcellus
ENSXCOG00000008759	trub2	86	54.861	ENSCCAG00000026531	-	87	54.861	Cebus_capucinus
ENSXCOG00000008759	trub2	84	52.313	ENSCCAG00000028463	-	85	52.313	Cebus_capucinus
ENSXCOG00000008759	trub2	83	56.115	ENSCATG00000038234	TRUB2	84	56.115	Cercocebus_atys
ENSXCOG00000008759	trub2	83	55.036	ENSCLAG00000001702	TRUB2	87	54.118	Chinchilla_lanigera
ENSXCOG00000008759	trub2	83	53.191	ENSCSAG00000014117	TRUB2	84	53.191	Chlorocebus_sabaeus
ENSXCOG00000008759	trub2	83	54.317	ENSCHOG00000001555	TRUB2	84	54.317	Choloepus_hoffmanni
ENSXCOG00000008759	trub2	90	51.603	ENSCPBG00000025186	TRUB2	82	54.804	Chrysemys_picta_bellii
ENSXCOG00000008759	trub2	85	32.877	ENSCSAVG00000003930	-	89	32.877	Ciona_savignyi
ENSXCOG00000008759	trub2	83	49.640	ENSCANG00000016135	TRUB2	82	49.640	Colobus_angolensis_palliatus
ENSXCOG00000008759	trub2	83	52.518	ENSCGRG00001024441	Trub2	91	50.000	Cricetulus_griseus_chok1gshd
ENSXCOG00000008759	trub2	83	52.518	ENSCGRG00000005633	Trub2	84	52.518	Cricetulus_griseus_crigri
ENSXCOG00000008759	trub2	93	63.694	ENSCSEG00000001331	trub2	94	63.694	Cynoglossus_semilaevis
ENSXCOG00000008759	trub2	99	77.108	ENSCVAG00000009901	trub2	99	77.108	Cyprinodon_variegatus
ENSXCOG00000008759	trub2	89	60.333	ENSDARG00000028379	trub2	83	61.512	Danio_rerio
ENSXCOG00000008759	trub2	82	55.197	ENSDNOG00000045679	-	83	55.197	Dasypus_novemcinctus
ENSXCOG00000008759	trub2	79	36.879	ENSDNOG00000043967	-	74	40.562	Dasypus_novemcinctus
ENSXCOG00000008759	trub2	83	55.036	ENSDORG00000016222	Trub2	87	55.036	Dipodomys_ordii
ENSXCOG00000008759	trub2	85	31.849	FBgn0033060	CG7849	91	31.849	Drosophila_melanogaster
ENSXCOG00000008759	trub2	83	54.317	ENSETEG00000009114	TRUB2	86	54.317	Echinops_telfairi
ENSXCOG00000008759	trub2	65	46.875	ENSEBUG00000015723	trub2	80	46.875	Eptatretus_burgeri
ENSXCOG00000008759	trub2	83	56.028	ENSEASG00005016819	TRUB2	84	56.028	Equus_asinus_asinus
ENSXCOG00000008759	trub2	83	56.115	ENSECAG00000023520	TRUB2	84	56.115	Equus_caballus
ENSXCOG00000008759	trub2	83	53.957	ENSEEUG00000008908	TRUB2	84	53.957	Erinaceus_europaeus
ENSXCOG00000008759	trub2	90	63.924	ENSELUG00000002376	trub2	95	65.246	Esox_lucius
ENSXCOG00000008759	trub2	83	57.143	ENSFCAG00000005839	TRUB2	86	57.143	Felis_catus
ENSXCOG00000008759	trub2	74	54.400	ENSFALG00000001364	TRUB2	80	55.200	Ficedula_albicollis
ENSXCOG00000008759	trub2	83	55.396	ENSFDAG00000021374	TRUB2	95	50.270	Fukomys_damarensis
ENSXCOG00000008759	trub2	100	72.917	ENSFHEG00000014655	trub2	100	72.917	Fundulus_heteroclitus
ENSXCOG00000008759	trub2	88	59.596	ENSGMOG00000000981	trub2	95	59.790	Gadus_morhua
ENSXCOG00000008759	trub2	82	54.745	ENSGALG00000004920	TRUB2	67	54.745	Gallus_gallus
ENSXCOG00000008759	trub2	100	93.155	ENSGAFG00000010107	trub2	100	93.452	Gambusia_affinis
ENSXCOG00000008759	trub2	98	68.997	ENSGACG00000001476	trub2	87	74.483	Gasterosteus_aculeatus
ENSXCOG00000008759	trub2	84	54.965	ENSGAGG00000022872	TRUB2	82	55.235	Gopherus_agassizii
ENSXCOG00000008759	trub2	83	55.396	ENSGGOG00000014780	TRUB2	84	55.396	Gorilla_gorilla
ENSXCOG00000008759	trub2	97	72.000	ENSHBUG00000022384	trub2	98	72.000	Haplochromis_burtoni
ENSXCOG00000008759	trub2	83	54.676	ENSHGLG00000016715	TRUB2	84	54.676	Heterocephalus_glaber_female
ENSXCOG00000008759	trub2	83	54.676	ENSHGLG00100016548	TRUB2	84	54.676	Heterocephalus_glaber_male
ENSXCOG00000008759	trub2	93	69.745	ENSHCOG00000017748	trub2	96	69.745	Hippocampus_comes
ENSXCOG00000008759	trub2	93	58.413	ENSIPUG00000017725	hdhd3	51	61.856	Ictalurus_punctatus
ENSXCOG00000008759	trub2	83	54.676	ENSSTOG00000008024	-	87	52.353	Ictidomys_tridecemlineatus
ENSXCOG00000008759	trub2	83	54.676	ENSSTOG00000022617	-	84	54.676	Ictidomys_tridecemlineatus
ENSXCOG00000008759	trub2	90	46.405	ENSJJAG00000019181	Trub2	91	46.405	Jaculus_jaculus
ENSXCOG00000008759	trub2	97	70.948	ENSKMAG00000007861	trub2	98	70.948	Kryptolebias_marmoratus
ENSXCOG00000008759	trub2	99	66.567	ENSLBEG00000000907	trub2	99	66.567	Labrus_bergylta
ENSXCOG00000008759	trub2	99	48.512	ENSLACG00000001515	TRUB2	99	47.917	Latimeria_chalumnae
ENSXCOG00000008759	trub2	86	60.900	ENSLOCG00000000885	trub2	95	60.900	Lepisosteus_oculatus
ENSXCOG00000008759	trub2	83	54.317	ENSLAFG00000002174	TRUB2	91	54.317	Loxodonta_africana
ENSXCOG00000008759	trub2	83	55.755	ENSMFAG00000000881	TRUB2	84	55.755	Macaca_fascicularis
ENSXCOG00000008759	trub2	83	55.755	ENSMMUG00000014146	TRUB2	84	55.755	Macaca_mulatta
ENSXCOG00000008759	trub2	83	55.755	ENSMNEG00000011189	TRUB2	84	55.755	Macaca_nemestrina
ENSXCOG00000008759	trub2	83	55.755	ENSMLEG00000037270	TRUB2	84	55.755	Mandrillus_leucophaeus
ENSXCOG00000008759	trub2	88	72.973	ENSMAMG00000023643	trub2	96	73.793	Mastacembelus_armatus
ENSXCOG00000008759	trub2	97	71.692	ENSMZEG00005016018	trub2	98	71.692	Maylandia_zebra
ENSXCOG00000008759	trub2	54	57.923	ENSMGAG00000003894	TRUB2	92	57.923	Meleagris_gallopavo
ENSXCOG00000008759	trub2	83	52.878	ENSMAUG00000010403	Trub2	95	47.568	Mesocricetus_auratus
ENSXCOG00000008759	trub2	83	56.115	ENSMICG00000047032	TRUB2	84	56.115	Microcebus_murinus
ENSXCOG00000008759	trub2	83	52.878	ENSMOCG00000014291	Trub2	91	52.878	Microtus_ochrogaster
ENSXCOG00000008759	trub2	93	68.790	ENSMMOG00000021674	trub2	97	68.790	Mola_mola
ENSXCOG00000008759	trub2	84	53.357	ENSMODG00000005940	TRUB2	95	53.357	Monodelphis_domestica
ENSXCOG00000008759	trub2	97	72.424	ENSMALG00000021231	trub2	98	72.424	Monopterus_albus
ENSXCOG00000008759	trub2	83	52.878	MGP_CAROLIEiJ_G0023368	Trub2	96	47.594	Mus_caroli
ENSXCOG00000008759	trub2	83	52.518	ENSMUSG00000039826	Trub2	95	47.568	Mus_musculus
ENSXCOG00000008759	trub2	83	53.237	MGP_PahariEiJ_G0024826	Trub2	87	51.765	Mus_pahari
ENSXCOG00000008759	trub2	83	52.878	MGP_SPRETEiJ_G0024286	Trub2	95	48.108	Mus_spretus
ENSXCOG00000008759	trub2	84	55.282	ENSMPUG00000013206	TRUB2	77	55.282	Mustela_putorius_furo
ENSXCOG00000008759	trub2	83	55.396	ENSMLUG00000005256	TRUB2	83	55.396	Myotis_lucifugus
ENSXCOG00000008759	trub2	83	51.799	ENSNGAG00000018679	Trub2	84	51.799	Nannospalax_galili
ENSXCOG00000008759	trub2	97	70.859	ENSNBRG00000016294	trub2	99	70.859	Neolamprologus_brichardi
ENSXCOG00000008759	trub2	83	55.396	ENSNLEG00000017556	TRUB2	84	55.396	Nomascus_leucogenys
ENSXCOG00000008759	trub2	83	53.957	ENSMEUG00000000484	TRUB2	89	53.957	Notamacropus_eugenii
ENSXCOG00000008759	trub2	87	48.658	ENSOPRG00000001981	TRUB2	84	50.903	Ochotona_princeps
ENSXCOG00000008759	trub2	88	53.378	ENSODEG00000017292	TRUB2	87	53.529	Octodon_degus
ENSXCOG00000008759	trub2	97	72.086	ENSONIG00000004230	trub2	99	72.086	Oreochromis_niloticus
ENSXCOG00000008759	trub2	56	50.521	ENSOANG00000029023	-	83	50.521	Ornithorhynchus_anatinus
ENSXCOG00000008759	trub2	83	55.396	ENSOCUG00000026296	TRUB2	76	55.396	Oryctolagus_cuniculus
ENSXCOG00000008759	trub2	96	70.370	ENSORLG00000020011	trub2	95	70.370	Oryzias_latipes
ENSXCOG00000008759	trub2	94	70.662	ENSORLG00020011028	trub2	90	70.662	Oryzias_latipes_hni
ENSXCOG00000008759	trub2	94	71.293	ENSORLG00015007494	trub2	94	71.609	Oryzias_latipes_hsok
ENSXCOG00000008759	trub2	97	70.245	ENSOMEG00000006702	trub2	99	70.245	Oryzias_melastigma
ENSXCOG00000008759	trub2	83	55.036	ENSOARG00000010579	-	84	55.036	Ovis_aries
ENSXCOG00000008759	trub2	60	56.500	ENSOARG00000003785	-	81	56.098	Ovis_aries
ENSXCOG00000008759	trub2	83	56.115	ENSPPAG00000043146	TRUB2	84	56.115	Pan_paniscus
ENSXCOG00000008759	trub2	83	57.143	ENSPPRG00000006307	TRUB2	86	57.143	Panthera_pardus
ENSXCOG00000008759	trub2	83	57.500	ENSPTIG00000012366	TRUB2	86	57.500	Panthera_tigris_altaica
ENSXCOG00000008759	trub2	83	55.755	ENSPTRG00000021423	TRUB2	84	55.755	Pan_troglodytes
ENSXCOG00000008759	trub2	83	55.755	ENSPTRG00000052151	-	84	55.755	Pan_troglodytes
ENSXCOG00000008759	trub2	83	55.755	ENSPANG00000025856	TRUB2	84	55.755	Papio_anubis
ENSXCOG00000008759	trub2	91	62.866	ENSPKIG00000019769	trub2	94	65.854	Paramormyrops_kingsleyae
ENSXCOG00000008759	trub2	84	51.064	ENSPSIG00000015701	TRUB2	93	51.071	Pelodiscus_sinensis
ENSXCOG00000008759	trub2	92	64.839	ENSPMGG00000010206	trub2	90	68.056	Periophthalmus_magnuspinnatus
ENSXCOG00000008759	trub2	83	53.047	ENSPEMG00000017893	Trub2	91	50.292	Peromyscus_maniculatus_bairdii
ENSXCOG00000008759	trub2	83	55.036	ENSPCIG00000026731	TRUB2	89	55.036	Phascolarctos_cinereus
ENSXCOG00000008759	trub2	97	92.097	ENSPFOG00000018018	trub2	87	92.097	Poecilia_formosa
ENSXCOG00000008759	trub2	97	92.097	ENSPLAG00000010484	trub2	94	92.097	Poecilia_latipinna
ENSXCOG00000008759	trub2	100	93.787	ENSPMEG00000012913	trub2	100	92.899	Poecilia_mexicana
ENSXCOG00000008759	trub2	100	92.899	ENSPREG00000002549	trub2	100	92.012	Poecilia_reticulata
ENSXCOG00000008759	trub2	83	55.000	ENSPPYG00000019650	TRUB2	86	55.000	Pongo_abelii
ENSXCOG00000008759	trub2	83	56.115	ENSPCAG00000015068	TRUB2	85	56.115	Procavia_capensis
ENSXCOG00000008759	trub2	83	55.396	ENSPCOG00000017100	TRUB2	84	55.396	Propithecus_coquereli
ENSXCOG00000008759	trub2	77	55.000	ENSPVAG00000001224	TRUB2	87	55.000	Pteropus_vampyrus
ENSXCOG00000008759	trub2	97	72.000	ENSPNYG00000013666	trub2	98	72.000	Pundamilia_nyererei
ENSXCOG00000008759	trub2	99	56.325	ENSPNAG00000017292	trub2	83	61.512	Pygocentrus_nattereri
ENSXCOG00000008759	trub2	83	52.688	ENSRNOG00000043189	Trub2	86	52.688	Rattus_norvegicus
ENSXCOG00000008759	trub2	83	50.360	ENSRBIG00000006965	TRUB2	82	50.360	Rhinopithecus_bieti
ENSXCOG00000008759	trub2	83	56.115	ENSRROG00000042928	TRUB2	84	56.115	Rhinopithecus_roxellana
ENSXCOG00000008759	trub2	83	55.755	ENSSBOG00000022439	TRUB2	84	55.755	Saimiri_boliviensis_boliviensis
ENSXCOG00000008759	trub2	86	63.194	ENSSFOG00015013391	trub2	92	63.194	Scleropages_formosus
ENSXCOG00000008759	trub2	99	68.675	ENSSMAG00000020820	trub2	98	68.373	Scophthalmus_maximus
ENSXCOG00000008759	trub2	97	72.615	ENSSDUG00000016928	trub2	97	72.615	Seriola_dumerili
ENSXCOG00000008759	trub2	97	71.166	ENSSLDG00000024701	trub2	97	71.166	Seriola_lalandi_dorsalis
ENSXCOG00000008759	trub2	94	48.418	ENSSPUG00000015515	TRUB2	94	48.418	Sphenodon_punctatus
ENSXCOG00000008759	trub2	99	70.149	ENSSPAG00000017865	trub2	100	69.162	Stegastes_partitus
ENSXCOG00000008759	trub2	83	54.676	ENSSSCG00000005645	TRUB2	84	53.414	Sus_scrofa
ENSXCOG00000008759	trub2	75	54.545	ENSTGUG00000003704	TRUB2	94	55.242	Taeniopygia_guttata
ENSXCOG00000008759	trub2	90	71.523	ENSTRUG00000015499	trub2	89	72.759	Takifugu_rubripes
ENSXCOG00000008759	trub2	87	70.205	ENSTNIG00000014721	trub2	99	70.690	Tetraodon_nigroviridis
ENSXCOG00000008759	trub2	53	53.371	ENSTBEG00000000586	TRUB2	79	53.371	Tupaia_belangeri
ENSXCOG00000008759	trub2	83	53.237	ENSTTRG00000016486	TRUB2	84	53.237	Tursiops_truncatus
ENSXCOG00000008759	trub2	84	55.986	ENSUAMG00000020276	TRUB2	83	55.986	Ursus_americanus
ENSXCOG00000008759	trub2	84	56.338	ENSUMAG00000022051	TRUB2	83	56.338	Ursus_maritimus
ENSXCOG00000008759	trub2	83	43.165	ENSVPAG00000005793	TRUB2	87	43.165	Vicugna_pacos
ENSXCOG00000008759	trub2	86	53.559	ENSVVUG00000013451	TRUB2	84	53.559	Vulpes_vulpes
ENSXCOG00000008759	trub2	85	53.472	ENSXETG00000003973	trub2	87	53.846	Xenopus_tropicalis
ENSXCOG00000008759	trub2	100	98.810	ENSXMAG00000015478	trub2	100	98.810	Xiphophorus_maculatus