EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008804 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2111 bases
Position: chrKQ557213.1:14918686-14920796
Accession: ZDB-GENE-030131-6372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011660	dsrm	PF00035.26	2.9e-48	1	4
ENSXCOP00000011660	dsrm	PF00035.26	2.9e-48	2	4
ENSXCOP00000011660	dsrm	PF00035.26	2.9e-48	3	4
ENSXCOP00000011660	dsrm	PF00035.26	2.9e-48	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011793	-	1179	-	ENSXCOP00000011660	392 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008804	stau1	88	59.599	ENSXCOG00000007032	stau2	81	60.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008804	stau1	83	66.061	ENSG00000124214	STAU1	95	64.583	Homo_sapiens
ENSXCOG00000008804	stau1	94	87.568	ENSAPOG00000017260	stau1	54	88.919	Acanthochromis_polyacanthus
ENSXCOG00000008804	stau1	98	70.984	ENSAMEG00000013681	STAU1	52	71.351	Ailuropoda_melanoleuca
ENSXCOG00000008804	stau1	94	82.656	ENSACIG00000015918	stau1	53	85.095	Amphilophus_citrinellus
ENSXCOG00000008804	stau1	94	86.327	ENSAOCG00000012224	stau1	54	87.668	Amphiprion_ocellaris
ENSXCOG00000008804	stau1	94	86.327	ENSAPEG00000012308	stau1	54	87.668	Amphiprion_percula
ENSXCOG00000008804	stau1	94	85.294	ENSATEG00000024600	stau1	56	86.631	Anabas_testudineus
ENSXCOG00000008804	stau1	94	73.670	ENSAPLG00000010527	STAU1	52	73.138	Anas_platyrhynchos
ENSXCOG00000008804	stau1	94	73.404	ENSACAG00000015909	STAU1	53	72.872	Anolis_carolinensis
ENSXCOG00000008804	stau1	83	64.583	ENSANAG00000032714	STAU1	56	69.928	Aotus_nancymaae
ENSXCOG00000008804	stau1	98	84.615	ENSACLG00000012270	stau1	56	84.359	Astatotilapia_calliptera
ENSXCOG00000008804	stau1	83	66.006	ENSAMXG00000016812	stau1	59	67.552	Astyanax_mexicanus
ENSXCOG00000008804	stau1	76	70.530	ENSBTAG00000000241	STAU1	53	65.924	Bos_taurus
ENSXCOG00000008804	stau1	83	65.758	ENSCJAG00000016233	STAU1	53	65.287	Callithrix_jacchus
ENSXCOG00000008804	stau1	98	69.620	ENSCAFG00000011347	STAU1	55	69.921	Canis_familiaris
ENSXCOG00000008804	stau1	98	69.620	ENSCAFG00020017123	STAU1	62	69.657	Canis_lupus_dingo
ENSXCOG00000008804	stau1	83	65.152	ENSCHIG00000001799	-	53	65.287	Capra_hircus
ENSXCOG00000008804	stau1	82	67.183	ENSTSYG00000036179	-	52	66.775	Carlito_syrichta
ENSXCOG00000008804	stau1	74	70.000	ENSCAPG00000017041	STAU1	54	70.438	Cavia_aperea
ENSXCOG00000008804	stau1	72	69.310	ENSCPOG00000005566	STAU1	57	69.343	Cavia_porcellus
ENSXCOG00000008804	stau1	83	64.583	ENSCCAG00000034339	STAU1	54	64.062	Cebus_capucinus
ENSXCOG00000008804	stau1	83	66.061	ENSCATG00000028474	STAU1	56	68.794	Cercocebus_atys
ENSXCOG00000008804	stau1	74	56.357	ENSCLAG00000002784	-	54	56.364	Chinchilla_lanigera
ENSXCOG00000008804	stau1	72	69.655	ENSCLAG00000006516	-	55	69.708	Chinchilla_lanigera
ENSXCOG00000008804	stau1	74	70.548	ENSCSAG00000014986	STAU1	55	70.290	Chlorocebus_sabaeus
ENSXCOG00000008804	stau1	83	65.861	ENSCHOG00000001511	STAU1	53	65.079	Choloepus_hoffmanni
ENSXCOG00000008804	stau1	94	73.404	ENSCPBG00000026741	STAU1	54	72.872	Chrysemys_picta_bellii
ENSXCOG00000008804	stau1	83	66.364	ENSCANG00000039220	STAU1	53	65.924	Colobus_angolensis_palliatus
ENSXCOG00000008804	stau1	72	66.901	ENSCGRG00001013453	Stau1	61	66.791	Cricetulus_griseus_chok1gshd
ENSXCOG00000008804	stau1	72	65.517	ENSCGRG00000007216	Stau1	55	65.328	Cricetulus_griseus_crigri
ENSXCOG00000008804	stau1	94	70.341	ENSCSEG00000000792	stau1	51	72.966	Cynoglossus_semilaevis
ENSXCOG00000008804	stau1	82	78.679	ENSCVAG00000005906	stau1	59	79.880	Cyprinodon_variegatus
ENSXCOG00000008804	stau1	94	76.408	ENSDARG00000044182	stau1	56	82.000	Danio_rerio
ENSXCOG00000008804	stau1	83	65.559	ENSDNOG00000014933	STAU1	52	65.714	Dasypus_novemcinctus
ENSXCOG00000008804	stau1	72	68.662	ENSDORG00000030220	Stau1	54	68.657	Dipodomys_ordii
ENSXCOG00000008804	stau1	98	70.663	ENSEASG00005023343	STAU1	65	69.853	Equus_asinus_asinus
ENSXCOG00000008804	stau1	98	71.762	ENSECAG00000012894	STAU1	59	69.653	Equus_caballus
ENSXCOG00000008804	stau1	94	78.249	ENSELUG00000002529	stau1	58	78.249	Esox_lucius
ENSXCOG00000008804	stau1	98	70.229	ENSFCAG00000001447	STAU1	58	69.928	Felis_catus
ENSXCOG00000008804	stau1	94	75.135	ENSFALG00000012940	STAU1	53	74.595	Ficedula_albicollis
ENSXCOG00000008804	stau1	72	69.310	ENSFDAG00000014119	-	55	69.708	Fukomys_damarensis
ENSXCOG00000008804	stau1	72	57.951	ENSFDAG00000020837	-	56	58.397	Fukomys_damarensis
ENSXCOG00000008804	stau1	94	89.305	ENSFHEG00000013517	stau1	54	90.642	Fundulus_heteroclitus
ENSXCOG00000008804	stau1	98	78.304	ENSGMOG00000016850	stau1	56	76.808	Gadus_morhua
ENSXCOG00000008804	stau1	94	74.865	ENSGALG00000004736	STAU1	53	74.324	Gallus_gallus
ENSXCOG00000008804	stau1	98	94.359	ENSGAFG00000010437	stau1	56	94.359	Gambusia_affinis
ENSXCOG00000008804	stau1	98	85.385	ENSGACG00000001352	stau1	56	85.128	Gasterosteus_aculeatus
ENSXCOG00000008804	stau1	94	74.595	ENSGAGG00000009825	STAU1	53	74.054	Gopherus_agassizii
ENSXCOG00000008804	stau1	74	69.128	ENSGGOG00000025351	STAU1	56	69.928	Gorilla_gorilla
ENSXCOG00000008804	stau1	98	84.359	ENSHBUG00000023668	stau1	56	84.103	Haplochromis_burtoni
ENSXCOG00000008804	stau1	72	70.423	ENSHGLG00000008730	STAU1	54	70.522	Heterocephalus_glaber_female
ENSXCOG00000008804	stau1	72	70.423	ENSHGLG00100000098	STAU1	54	70.522	Heterocephalus_glaber_male
ENSXCOG00000008804	stau1	94	79.625	ENSHCOG00000018461	stau1	54	80.965	Hippocampus_comes
ENSXCOG00000008804	stau1	95	77.394	ENSIPUG00000023725	stau1	58	76.744	Ictalurus_punctatus
ENSXCOG00000008804	stau1	72	69.718	ENSSTOG00000003634	STAU1	54	69.776	Ictidomys_tridecemlineatus
ENSXCOG00000008804	stau1	72	66.549	ENSJJAG00000020032	Stau1	54	68.657	Jaculus_jaculus
ENSXCOG00000008804	stau1	94	85.135	ENSKMAG00000007135	stau1	53	87.838	Kryptolebias_marmoratus
ENSXCOG00000008804	stau1	98	83.290	ENSLBEG00000020172	stau1	54	85.791	Labrus_bergylta
ENSXCOG00000008804	stau1	98	75.000	ENSLACG00000016157	STAU1	53	74.737	Latimeria_chalumnae
ENSXCOG00000008804	stau1	94	79.189	ENSLOCG00000003134	stau1	53	79.189	Lepisosteus_oculatus
ENSXCOG00000008804	stau1	76	71.854	ENSLAFG00000003238	STAU1	56	72.378	Loxodonta_africana
ENSXCOG00000008804	stau1	83	66.061	ENSMFAG00000040931	STAU1	56	68.794	Macaca_fascicularis
ENSXCOG00000008804	stau1	74	69.128	ENSMMUG00000002302	STAU1	73	63.542	Macaca_mulatta
ENSXCOG00000008804	stau1	83	66.061	ENSMNEG00000033821	STAU1	56	68.794	Macaca_nemestrina
ENSXCOG00000008804	stau1	83	66.061	ENSMLEG00000031383	STAU1	53	65.605	Mandrillus_leucophaeus
ENSXCOG00000008804	stau1	94	85.255	ENSMAMG00000017586	stau1	56	86.595	Mastacembelus_armatus
ENSXCOG00000008804	stau1	94	83.646	ENSMZEG00005015605	stau1	54	84.987	Maylandia_zebra
ENSXCOG00000008804	stau1	94	73.670	ENSMGAG00000004719	STAU1	52	73.138	Meleagris_gallopavo
ENSXCOG00000008804	stau1	72	65.862	ENSMAUG00000013846	Stau1	55	65.693	Mesocricetus_auratus
ENSXCOG00000008804	stau1	86	62.717	ENSMICG00000001995	STAU1	54	63.750	Microcebus_murinus
ENSXCOG00000008804	stau1	72	68.085	ENSMOCG00000018743	Stau1	55	66.058	Microtus_ochrogaster
ENSXCOG00000008804	stau1	94	84.987	ENSMMOG00000015455	stau1	58	86.552	Mola_mola
ENSXCOG00000008804	stau1	98	73.834	ENSMODG00000016276	STAU1	55	73.514	Monodelphis_domestica
ENSXCOG00000008804	stau1	94	84.450	ENSMALG00000000045	stau1	54	85.791	Monopterus_albus
ENSXCOG00000008804	stau1	72	67.021	MGP_CAROLIEiJ_G0024699	Stau1	62	64.964	Mus_caroli
ENSXCOG00000008804	stau1	72	67.021	ENSMUSG00000039536	Stau1	62	64.964	Mus_musculus
ENSXCOG00000008804	stau1	72	66.312	MGP_PahariEiJ_G0026141	Stau1	62	64.234	Mus_pahari
ENSXCOG00000008804	stau1	72	67.021	MGP_SPRETEiJ_G0025619	Stau1	62	64.964	Mus_spretus
ENSXCOG00000008804	stau1	98	70.725	ENSMPUG00000017581	STAU1	55	71.081	Mustela_putorius_furo
ENSXCOG00000008804	stau1	72	67.586	ENSNGAG00000007108	Stau1	55	67.518	Nannospalax_galili
ENSXCOG00000008804	stau1	98	84.359	ENSNBRG00000017596	stau1	56	84.103	Neolamprologus_brichardi
ENSXCOG00000008804	stau1	83	64.545	ENSNLEG00000006955	STAU1	56	68.794	Nomascus_leucogenys
ENSXCOG00000008804	stau1	84	63.855	ENSOPRG00000014569	STAU1	54	63.924	Ochotona_princeps
ENSXCOG00000008804	stau1	74	72.069	ENSODEG00000006523	STAU1	55	72.628	Octodon_degus
ENSXCOG00000008804	stau1	94	79.337	ENSONIG00000004152	stau1	54	80.612	Oreochromis_niloticus
ENSXCOG00000008804	stau1	94	71.277	ENSOANG00000006394	STAU1	53	71.277	Ornithorhynchus_anatinus
ENSXCOG00000008804	stau1	84	64.048	ENSOCUG00000006214	STAU1	54	64.127	Oryctolagus_cuniculus
ENSXCOG00000008804	stau1	99	83.690	ENSOMEG00000002388	stau1	54	85.027	Oryzias_melastigma
ENSXCOG00000008804	stau1	73	41.837	ENSOGAG00000028222	-	52	39.785	Otolemur_garnettii
ENSXCOG00000008804	stau1	76	70.530	ENSOGAG00000002127	STAU1	51	66.450	Otolemur_garnettii
ENSXCOG00000008804	stau1	98	71.244	ENSOARG00000012204	STAU1	55	71.622	Ovis_aries
ENSXCOG00000008804	stau1	74	69.128	ENSPPAG00000032023	STAU1	56	69.928	Pan_paniscus
ENSXCOG00000008804	stau1	83	66.667	ENSPPRG00000003436	STAU1	58	69.928	Panthera_pardus
ENSXCOG00000008804	stau1	83	66.667	ENSPTIG00000011768	STAU1	58	69.928	Panthera_tigris_altaica
ENSXCOG00000008804	stau1	74	69.128	ENSPTRG00000023130	STAU1	56	69.928	Pan_troglodytes
ENSXCOG00000008804	stau1	83	66.061	ENSPANG00000020560	STAU1	53	65.605	Papio_anubis
ENSXCOG00000008804	stau1	98	77.720	ENSPKIG00000024588	stau1	53	80.000	Paramormyrops_kingsleyae
ENSXCOG00000008804	stau1	94	75.135	ENSPSIG00000010731	STAU1	53	74.595	Pelodiscus_sinensis
ENSXCOG00000008804	stau1	94	83.646	ENSPMGG00000018553	stau1	63	83.618	Periophthalmus_magnuspinnatus
ENSXCOG00000008804	stau1	72	65.862	ENSPEMG00000022045	Stau1	55	65.693	Peromyscus_maniculatus_bairdii
ENSXCOG00000008804	stau1	98	73.575	ENSPCIG00000023269	STAU1	63	68.978	Phascolarctos_cinereus
ENSXCOG00000008804	stau1	98	93.095	ENSPFOG00000017253	stau1	56	93.095	Poecilia_formosa
ENSXCOG00000008804	stau1	98	92.987	ENSPLAG00000014829	stau1	89	95.087	Poecilia_latipinna
ENSXCOG00000008804	stau1	98	93.095	ENSPMEG00000007495	stau1	57	93.095	Poecilia_mexicana
ENSXCOG00000008804	stau1	98	92.839	ENSPREG00000003477	stau1	56	92.839	Poecilia_reticulata
ENSXCOG00000008804	stau1	83	65.653	ENSPPYG00000011111	STAU1	53	65.176	Pongo_abelii
ENSXCOG00000008804	stau1	71	66.784	ENSPCAG00000002459	STAU1	51	66.784	Procavia_capensis
ENSXCOG00000008804	stau1	86	64.118	ENSPCOG00000027746	STAU1	56	67.730	Propithecus_coquereli
ENSXCOG00000008804	stau1	98	84.359	ENSPNYG00000014436	stau1	56	84.103	Pundamilia_nyererei
ENSXCOG00000008804	stau1	98	76.081	ENSPNAG00000011323	stau1	62	74.250	Pygocentrus_nattereri
ENSXCOG00000008804	stau1	72	65.172	ENSRNOG00000007781	Stau1	55	64.964	Rattus_norvegicus
ENSXCOG00000008804	stau1	74	70.648	ENSRBIG00000037345	STAU1	55	71.119	Rhinopithecus_bieti
ENSXCOG00000008804	stau1	83	66.061	ENSRROG00000039008	STAU1	55	71.119	Rhinopithecus_roxellana
ENSXCOG00000008804	stau1	83	64.583	ENSSBOG00000034448	STAU1	56	69.928	Saimiri_boliviensis_boliviensis
ENSXCOG00000008804	stau1	98	73.575	ENSSHAG00000009492	STAU1	55	73.243	Sarcophilus_harrisii
ENSXCOG00000008804	stau1	94	79.459	ENSSFOG00015021497	stau1	53	78.919	Scleropages_formosus
ENSXCOG00000008804	stau1	94	85.523	ENSSMAG00000017410	stau1	53	86.863	Scophthalmus_maximus
ENSXCOG00000008804	stau1	94	86.059	ENSSDUG00000019439	stau1	54	87.399	Seriola_dumerili
ENSXCOG00000008804	stau1	94	86.059	ENSSLDG00000025040	stau1	57	87.399	Seriola_lalandi_dorsalis
ENSXCOG00000008804	stau1	94	73.138	ENSSPUG00000017983	STAU1	56	72.606	Sphenodon_punctatus
ENSXCOG00000008804	stau1	94	86.327	ENSSPAG00000019275	stau1	54	87.668	Stegastes_partitus
ENSXCOG00000008804	stau1	98	72.021	ENSSSCG00000027444	STAU1	61	72.432	Sus_scrofa
ENSXCOG00000008804	stau1	94	73.210	ENSTGUG00000008784	STAU1	52	72.679	Taeniopygia_guttata
ENSXCOG00000008804	stau1	94	84.097	ENSTRUG00000005837	stau1	54	86.523	Takifugu_rubripes
ENSXCOG00000008804	stau1	94	83.110	ENSTNIG00000014732	stau1	55	84.182	Tetraodon_nigroviridis
ENSXCOG00000008804	stau1	74	69.759	ENSUAMG00000025449	STAU1	64	69.004	Ursus_americanus
ENSXCOG00000008804	stau1	74	67.893	ENSUMAG00000024475	STAU1	66	67.845	Ursus_maritimus
ENSXCOG00000008804	stau1	83	65.758	ENSVPAG00000001313	STAU1	53	65.924	Vicugna_pacos
ENSXCOG00000008804	stau1	98	69.620	ENSVVUG00000022325	STAU1	55	69.921	Vulpes_vulpes
ENSXCOG00000008804	stau1	94	69.892	ENSXETG00000001783	stau1	53	71.892	Xenopus_tropicalis
ENSXCOG00000008804	stau1	98	94.359	ENSXMAG00000016175	stau1	56	94.359	Xiphophorus_maculatus