EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000008872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 9210 bases
Position: chrKQ557225.1:41325416-41334625
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011745	zf-met	PF12874.7	7.1e-20	1	3
ENSXCOP00000011745	zf-met	PF12874.7	7.1e-20	2	3
ENSXCOP00000011745	zf-met	PF12874.7	7.1e-20	3	3
ENSXCOP00000011745	zf-C2H2_jaz	PF12171.8	8.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011876	-	1029	-	ENSXCOP00000011742	342 (aa)	-	-
ENSXCOT00000011879	-	1062	-	ENSXCOP00000011745	353 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008872	-	51	45.161	ENSG00000113761	ZNF346	58	48.214	Homo_sapiens
ENSXCOG00000008872	-	50	64.171	ENSAPOG00000006793	znf346	84	65.241	Acanthochromis_polyacanthus
ENSXCOG00000008872	-	51	44.624	ENSAMEG00000018208	ZNF346	52	44.624	Ailuropoda_melanoleuca
ENSXCOG00000008872	-	52	60.989	ENSACIG00000024439	znf346	83	70.213	Amphilophus_citrinellus
ENSXCOG00000008872	-	50	65.054	ENSAOCG00000000231	znf346	73	66.129	Amphiprion_ocellaris
ENSXCOG00000008872	-	50	65.217	ENSAPEG00000022103	znf346	75	66.304	Amphiprion_percula
ENSXCOG00000008872	-	52	60.938	ENSATEG00000022779	znf346	72	60.938	Anabas_testudineus
ENSXCOG00000008872	-	51	43.850	ENSAPLG00000002968	ZNF346	83	43.850	Anas_platyrhynchos
ENSXCOG00000008872	-	54	46.701	ENSACAG00000005394	ZNF346	78	46.701	Anolis_carolinensis
ENSXCOG00000008872	-	51	44.149	ENSANAG00000030820	ZNF346	58	45.833	Aotus_nancymaae
ENSXCOG00000008872	-	50	65.193	ENSACLG00000015637	znf346	78	65.193	Astatotilapia_calliptera
ENSXCOG00000008872	-	51	43.850	ENSBTAG00000010541	ZNF346	58	43.850	Bos_taurus
ENSXCOG00000008872	-	51	43.548	ENSCJAG00000007194	ZNF346	62	43.548	Callithrix_jacchus
ENSXCOG00000008872	-	51	43.085	ENSCAFG00000016541	ZNF346	58	43.085	Canis_familiaris
ENSXCOG00000008872	-	51	44.086	ENSCAFG00020011793	ZNF346	56	44.086	Canis_lupus_dingo
ENSXCOG00000008872	-	51	43.850	ENSCHIG00000019690	ZNF346	58	43.850	Capra_hircus
ENSXCOG00000008872	-	60	40.000	ENSTSYG00000011481	ZNF346	94	40.000	Carlito_syrichta
ENSXCOG00000008872	-	54	46.154	ENSCPOG00000002813	ZNF346	62	48.333	Cavia_porcellus
ENSXCOG00000008872	-	51	43.011	ENSCCAG00000025324	ZNF346	68	43.011	Cebus_capucinus
ENSXCOG00000008872	-	51	45.161	ENSCATG00000032030	ZNF346	58	48.214	Cercocebus_atys
ENSXCOG00000008872	-	58	43.810	ENSCLAG00000016325	ZNF346	67	43.810	Chinchilla_lanigera
ENSXCOG00000008872	-	51	44.149	ENSCSAG00000009071	ZNF346	58	44.149	Chlorocebus_sabaeus
ENSXCOG00000008872	-	67	38.843	ENSCHOG00000001795	ZNF346	76	38.843	Choloepus_hoffmanni
ENSXCOG00000008872	-	51	49.468	ENSCPBG00000022601	ZNF346	73	49.468	Chrysemys_picta_bellii
ENSXCOG00000008872	-	51	45.161	ENSCANG00000019382	ZNF346	58	48.214	Colobus_angolensis_palliatus
ENSXCOG00000008872	-	59	41.509	ENSCGRG00001012343	Zfp346	66	41.509	Cricetulus_griseus_chok1gshd
ENSXCOG00000008872	-	59	40.278	ENSCGRG00000005866	Zfp346	96	40.278	Cricetulus_griseus_crigri
ENSXCOG00000008872	-	50	61.111	ENSCSEG00000016403	znf346	66	61.667	Cynoglossus_semilaevis
ENSXCOG00000008872	-	59	71.429	ENSCVAG00000022651	-	66	71.429	Cyprinodon_variegatus
ENSXCOG00000008872	-	55	52.857	ENSDARG00000060695	znf346	74	52.857	Danio_rerio
ENSXCOG00000008872	-	51	42.021	ENSDNOG00000040065	ZNF346	56	42.021	Dasypus_novemcinctus
ENSXCOG00000008872	-	51	44.565	ENSDORG00000013755	Zfp346	71	44.565	Dipodomys_ordii
ENSXCOG00000008872	-	51	43.617	ENSEASG00005012266	ZNF346	58	43.617	Equus_asinus_asinus
ENSXCOG00000008872	-	51	43.617	ENSECAG00000008904	ZNF346	58	43.617	Equus_caballus
ENSXCOG00000008872	-	59	37.441	ENSEEUG00000014263	-	93	37.441	Erinaceus_europaeus
ENSXCOG00000008872	-	50	57.778	ENSELUG00000011376	znf346	72	57.778	Esox_lucius
ENSXCOG00000008872	-	51	45.902	ENSFCAG00000038511	ZNF346	58	48.214	Felis_catus
ENSXCOG00000008872	-	54	43.655	ENSFALG00000008661	ZNF346	81	43.655	Ficedula_albicollis
ENSXCOG00000008872	-	54	45.641	ENSFDAG00000012914	ZNF346	62	47.222	Fukomys_damarensis
ENSXCOG00000008872	-	59	68.519	ENSFHEG00000020328	znf346	70	68.519	Fundulus_heteroclitus
ENSXCOG00000008872	-	52	55.978	ENSGMOG00000015384	znf346	85	58.602	Gadus_morhua
ENSXCOG00000008872	-	54	45.178	ENSGALG00000001144	ZNF346	69	45.178	Gallus_gallus
ENSXCOG00000008872	-	52	63.636	ENSGACG00000020800	znf346	78	63.636	Gasterosteus_aculeatus
ENSXCOG00000008872	-	51	48.936	ENSGAGG00000011389	ZNF346	67	48.936	Gopherus_agassizii
ENSXCOG00000008872	-	51	45.161	ENSGGOG00000015260	ZNF346	58	48.214	Gorilla_gorilla
ENSXCOG00000008872	-	50	65.193	ENSHBUG00000020017	znf346	78	65.193	Haplochromis_burtoni
ENSXCOG00000008872	-	54	46.154	ENSHGLG00000008069	ZNF346	62	47.778	Heterocephalus_glaber_female
ENSXCOG00000008872	-	54	46.154	ENSHGLG00100019075	ZNF346	62	47.778	Heterocephalus_glaber_male
ENSXCOG00000008872	-	50	52.459	ENSHCOG00000010725	-	55	52.459	Hippocampus_comes
ENSXCOG00000008872	-	54	43.434	ENSSTOG00000000428	ZNF346	62	46.667	Ictidomys_tridecemlineatus
ENSXCOG00000008872	-	51	44.809	ENSJJAG00000021062	Zfp346	68	44.809	Jaculus_jaculus
ENSXCOG00000008872	-	52	69.022	ENSKMAG00000018586	znf346	67	69.022	Kryptolebias_marmoratus
ENSXCOG00000008872	-	50	64.516	ENSLBEG00000016036	znf346	92	64.516	Labrus_bergylta
ENSXCOG00000008872	-	52	53.723	ENSLOCG00000012305	znf346	69	53.723	Lepisosteus_oculatus
ENSXCOG00000008872	-	51	44.624	ENSLAFG00000015514	ZNF346	57	44.624	Loxodonta_africana
ENSXCOG00000008872	-	51	45.161	ENSMFAG00000003577	ZNF346	58	48.214	Macaca_fascicularis
ENSXCOG00000008872	-	51	45.161	ENSMMUG00000011033	ZNF346	58	48.214	Macaca_mulatta
ENSXCOG00000008872	-	51	45.161	ENSMNEG00000030466	ZNF346	58	48.214	Macaca_nemestrina
ENSXCOG00000008872	-	51	45.902	ENSMLEG00000041138	ZNF346	58	48.214	Mandrillus_leucophaeus
ENSXCOG00000008872	-	50	65.193	ENSMZEG00005009446	znf346	78	65.193	Maylandia_zebra
ENSXCOG00000008872	-	59	41.038	ENSMAUG00000010058	Zfp346	66	41.038	Mesocricetus_auratus
ENSXCOG00000008872	-	51	44.624	ENSMICG00000007633	ZNF346	58	47.619	Microcebus_murinus
ENSXCOG00000008872	-	60	39.910	ENSMOCG00000000856	Zfp346	68	41.346	Microtus_ochrogaster
ENSXCOG00000008872	-	51	44.809	ENSMODG00000004918	-	73	44.809	Monodelphis_domestica
ENSXCOG00000008872	-	61	39.367	MGP_CAROLIEiJ_G0018551	-	80	40.000	Mus_caroli
ENSXCOG00000008872	-	59	40.930	ENSMUSG00000021481	Zfp346	66	40.930	Mus_musculus
ENSXCOG00000008872	-	55	39.899	MGP_PahariEiJ_G0019616	Zfp346	65	39.375	Mus_pahari
ENSXCOG00000008872	-	59	40.278	MGP_SPRETEiJ_G0019431	Zfp346	65	40.625	Mus_spretus
ENSXCOG00000008872	-	51	44.624	ENSMPUG00000012295	ZNF346	56	44.624	Mustela_putorius_furo
ENSXCOG00000008872	-	54	38.462	ENSMLUG00000005597	ZNF346	62	38.462	Myotis_lucifugus
ENSXCOG00000008872	-	54	43.299	ENSNGAG00000010928	Zfp346	76	43.299	Nannospalax_galili
ENSXCOG00000008872	-	50	65.193	ENSNBRG00000009412	znf346	78	65.193	Neolamprologus_brichardi
ENSXCOG00000008872	-	51	44.624	ENSNLEG00000012612	ZNF346	58	47.619	Nomascus_leucogenys
ENSXCOG00000008872	-	59	39.631	ENSOPRG00000009768	ZNF346	57	39.631	Ochotona_princeps
ENSXCOG00000008872	-	54	43.814	ENSODEG00000009676	ZNF346	62	47.222	Octodon_degus
ENSXCOG00000008872	-	50	65.746	ENSONIG00000017316	znf346	83	62.963	Oreochromis_niloticus
ENSXCOG00000008872	-	66	37.052	ENSOANG00000008690	-	85	37.450	Ornithorhynchus_anatinus
ENSXCOG00000008872	-	59	42.056	ENSOCUG00000013360	ZNF346	63	42.056	Oryctolagus_cuniculus
ENSXCOG00000008872	-	64	47.899	ENSORLG00000013862	znf346	50	47.899	Oryzias_latipes
ENSXCOG00000008872	-	64	47.009	ENSORLG00020011469	znf346	50	47.009	Oryzias_latipes_hni
ENSXCOG00000008872	-	64	48.319	ENSORLG00015018451	znf346	52	48.319	Oryzias_latipes_hsok
ENSXCOG00000008872	-	51	43.011	ENSOGAG00000009061	ZNF346	58	43.011	Otolemur_garnettii
ENSXCOG00000008872	-	51	43.850	ENSOARG00000003425	ZNF346	58	43.850	Ovis_aries
ENSXCOG00000008872	-	51	45.161	ENSPPAG00000031435	ZNF346	58	48.214	Pan_paniscus
ENSXCOG00000008872	-	51	45.902	ENSPPRG00000007029	ZNF346	58	48.214	Panthera_pardus
ENSXCOG00000008872	-	51	45.902	ENSPTIG00000013172	ZNF346	58	48.214	Panthera_tigris_altaica
ENSXCOG00000008872	-	51	45.161	ENSPTRG00000017573	ZNF346	58	48.214	Pan_troglodytes
ENSXCOG00000008872	-	51	45.161	ENSPANG00000023732	ZNF346	58	48.214	Papio_anubis
ENSXCOG00000008872	-	50	53.371	ENSPKIG00000009247	znf346	83	53.371	Paramormyrops_kingsleyae
ENSXCOG00000008872	-	51	47.872	ENSPSIG00000016116	ZNF346	59	52.500	Pelodiscus_sinensis
ENSXCOG00000008872	-	50	40.678	ENSPMGG00000011054	znf346	88	57.419	Periophthalmus_magnuspinnatus
ENSXCOG00000008872	-	60	40.271	ENSPEMG00000000913	Zfp346	66	40.271	Peromyscus_maniculatus_bairdii
ENSXCOG00000008872	-	51	43.716	ENSPCIG00000000498	-	72	43.716	Phascolarctos_cinereus
ENSXCOG00000008872	-	50	87.079	ENSPFOG00000018088	znf346	62	87.079	Poecilia_formosa
ENSXCOG00000008872	-	50	87.640	ENSPLAG00000022457	znf346	66	87.640	Poecilia_latipinna
ENSXCOG00000008872	-	50	87.079	ENSPMEG00000012817	znf346	66	87.079	Poecilia_mexicana
ENSXCOG00000008872	-	58	83.660	ENSPREG00000005815	znf346	73	83.660	Poecilia_reticulata
ENSXCOG00000008872	-	51	37.234	ENSPPYG00000016082	-	62	37.234	Pongo_abelii
ENSXCOG00000008872	-	51	44.624	ENSPCOG00000025690	ZNF346	59	47.619	Propithecus_coquereli
ENSXCOG00000008872	-	54	43.939	ENSPVAG00000006690	ZNF346	55	43.939	Pteropus_vampyrus
ENSXCOG00000008872	-	50	65.193	ENSPNYG00000008154	znf346	78	65.193	Pundamilia_nyererei
ENSXCOG00000008872	-	59	41.121	ENSRNOG00000016867	Zfp346	64	41.121	Rattus_norvegicus
ENSXCOG00000008872	-	51	45.161	ENSRBIG00000036149	ZNF346	58	48.214	Rhinopithecus_bieti
ENSXCOG00000008872	-	51	45.161	ENSRROG00000037944	ZNF346	58	48.214	Rhinopithecus_roxellana
ENSXCOG00000008872	-	51	43.011	ENSSBOG00000034067	ZNF346	58	45.833	Saimiri_boliviensis_boliviensis
ENSXCOG00000008872	-	51	43.169	ENSSHAG00000011651	-	82	42.623	Sarcophilus_harrisii
ENSXCOG00000008872	-	50	53.371	ENSSFOG00015010306	znf346	75	53.371	Scleropages_formosus
ENSXCOG00000008872	-	52	60.714	ENSSMAG00000007533	znf346	69	61.735	Scophthalmus_maximus
ENSXCOG00000008872	-	51	46.809	ENSSPUG00000006033	ZNF346	67	46.809	Sphenodon_punctatus
ENSXCOG00000008872	-	50	65.946	ENSSPAG00000003836	znf346	70	65.946	Stegastes_partitus
ENSXCOG00000008872	-	51	43.617	ENSSSCG00000014046	ZNF346	58	43.617	Sus_scrofa
ENSXCOG00000008872	-	51	44.086	ENSTTRG00000002040	ZNF346	52	44.086	Tursiops_truncatus
ENSXCOG00000008872	-	51	44.624	ENSUMAG00000024351	ZNF346	56	44.624	Ursus_maritimus
ENSXCOG00000008872	-	51	43.085	ENSVVUG00000001235	ZNF346	64	43.085	Vulpes_vulpes
ENSXCOG00000008872	-	55	38.605	ENSXETG00000007230	znf346	61	38.605	Xenopus_tropicalis
ENSXCOG00000008872	-	65	70.539	ENSXMAG00000026755	znf346	72	70.539	Xiphophorus_maculatus