EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008881 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4683 bases
Position: chrKQ557225.1:41342980-41347662
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011749	RVT_1	PF00078.27	5.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011884	-	2658	-	ENSXCOP00000011749	885 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008881	-	93	40.595	ENSXCOG00000013093	-	74	40.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008881	-	99	38.505	ENSACIG00000012161	-	77	38.505	Amphilophus_citrinellus
ENSXCOG00000008881	-	91	43.276	ENSACIG00000007038	-	76	41.991	Amphilophus_citrinellus
ENSXCOG00000008881	-	97	37.514	ENSACIG00000010787	-	79	37.514	Amphilophus_citrinellus
ENSXCOG00000008881	-	92	43.689	ENSACIG00000009025	-	93	43.689	Amphilophus_citrinellus
ENSXCOG00000008881	-	92	43.484	ENSACIG00000013116	-	81	43.484	Amphilophus_citrinellus
ENSXCOG00000008881	-	91	38.329	ENSAMXG00000042811	-	69	38.329	Astyanax_mexicanus
ENSXCOG00000008881	-	94	38.095	ENSCPBG00000003842	-	64	38.095	Chrysemys_picta_bellii
ENSXCOG00000008881	-	90	43.125	ENSCVAG00000004138	-	76	43.125	Cyprinodon_variegatus
ENSXCOG00000008881	-	92	36.683	ENSELUG00000004597	-	84	36.887	Esox_lucius
ENSXCOG00000008881	-	81	34.414	ENSELUG00000004618	-	66	30.086	Esox_lucius
ENSXCOG00000008881	-	93	41.677	ENSFHEG00000002853	-	77	41.677	Fundulus_heteroclitus
ENSXCOG00000008881	-	81	42.639	ENSFHEG00000007211	-	72	41.415	Fundulus_heteroclitus
ENSXCOG00000008881	-	91	42.034	ENSFHEG00000022106	-	76	42.034	Fundulus_heteroclitus
ENSXCOG00000008881	-	89	39.547	ENSFHEG00000002865	-	68	39.547	Fundulus_heteroclitus
ENSXCOG00000008881	-	66	40.847	ENSGMOG00000005227	-	99	40.847	Gadus_morhua
ENSXCOG00000008881	-	55	34.185	ENSGACG00000015045	-	100	34.185	Gasterosteus_aculeatus
ENSXCOG00000008881	-	56	31.923	ENSGACG00000000426	-	99	31.923	Gasterosteus_aculeatus
ENSXCOG00000008881	-	79	47.761	ENSHCOG00000007436	-	65	47.761	Hippocampus_comes
ENSXCOG00000008881	-	90	37.748	ENSHCOG00000000471	-	68	37.748	Hippocampus_comes
ENSXCOG00000008881	-	92	38.889	ENSHCOG00000007397	-	72	38.889	Hippocampus_comes
ENSXCOG00000008881	-	90	37.901	ENSHCOG00000007389	-	76	37.901	Hippocampus_comes
ENSXCOG00000008881	-	99	39.041	ENSLBEG00000006732	-	94	39.041	Labrus_bergylta
ENSXCOG00000008881	-	99	39.041	ENSLBEG00000004576	-	94	39.041	Labrus_bergylta
ENSXCOG00000008881	-	90	39.401	ENSLBEG00000003745	-	91	39.401	Labrus_bergylta
ENSXCOG00000008881	-	66	33.163	ENSLACG00000009240	-	100	33.163	Latimeria_chalumnae
ENSXCOG00000008881	-	89	33.829	ENSLACG00000006357	-	99	33.829	Latimeria_chalumnae
ENSXCOG00000008881	-	91	36.296	ENSLOCG00000011928	-	73	36.296	Lepisosteus_oculatus
ENSXCOG00000008881	-	91	38.527	ENSLOCG00000017064	-	74	38.527	Lepisosteus_oculatus
ENSXCOG00000008881	-	60	40.341	ENSLOCG00000002743	-	100	40.341	Lepisosteus_oculatus
ENSXCOG00000008881	-	91	42.402	ENSMAMG00000019985	-	69	42.402	Mastacembelus_armatus
ENSXCOG00000008881	-	92	43.636	ENSONIG00000020875	-	71	43.636	Oreochromis_niloticus
ENSXCOG00000008881	-	98	37.472	ENSOMEG00000015368	-	83	37.472	Oryzias_melastigma
ENSXCOG00000008881	-	91	40.221	ENSPMGG00000017392	-	87	40.221	Periophthalmus_magnuspinnatus
ENSXCOG00000008881	-	69	40.260	ENSPMGG00000001593	-	63	40.260	Periophthalmus_magnuspinnatus
ENSXCOG00000008881	-	94	82.027	ENSPLAG00000011817	-	82	82.388	Poecilia_latipinna
ENSXCOG00000008881	-	92	72.660	ENSPLAG00000011810	-	77	72.660	Poecilia_latipinna
ENSXCOG00000008881	-	94	72.651	ENSPLAG00000023379	-	99	72.651	Poecilia_latipinna
ENSXCOG00000008881	-	93	72.871	ENSPLAG00000022994	-	78	72.871	Poecilia_latipinna
ENSXCOG00000008881	-	94	84.077	ENSPMEG00000003431	-	80	84.560	Poecilia_mexicana
ENSXCOG00000008881	-	94	68.231	ENSPMEG00000008574	-	77	68.231	Poecilia_mexicana
ENSXCOG00000008881	-	90	52.375	ENSPREG00000005456	-	69	52.375	Poecilia_reticulata
ENSXCOG00000008881	-	94	70.929	ENSPREG00000012484	-	74	70.929	Poecilia_reticulata
ENSXCOG00000008881	-	92	51.267	ENSPREG00000005756	-	76	51.267	Poecilia_reticulata
ENSXCOG00000008881	-	91	39.829	ENSPNAG00000021754	-	69	39.829	Pygocentrus_nattereri
ENSXCOG00000008881	-	72	41.061	ENSPNAG00000017596	-	68	41.061	Pygocentrus_nattereri
ENSXCOG00000008881	-	92	39.448	ENSPNAG00000003539	-	68	39.448	Pygocentrus_nattereri
ENSXCOG00000008881	-	91	40.655	ENSPNAG00000007038	-	73	39.954	Pygocentrus_nattereri
ENSXCOG00000008881	-	92	40.433	ENSPNAG00000016635	-	69	40.433	Pygocentrus_nattereri
ENSXCOG00000008881	-	85	35.897	ENSPNAG00000014625	-	70	35.897	Pygocentrus_nattereri
ENSXCOG00000008881	-	94	93.389	ENSXMAG00000028672	-	77	93.389	Xiphophorus_maculatus