EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000008908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 6495 bases
Position: chrKQ557225.1:41629217-41635711
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011787	zf-C2H2	PF00096.26	1.8e-16	1	3
ENSXCOP00000011787	zf-C2H2	PF00096.26	1.8e-16	2	3
ENSXCOP00000011787	zf-C2H2	PF00096.26	1.8e-16	3	3
ENSXCOP00000011787	zf-met	PF12874.7	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011923	-	1413	-	ENSXCOP00000011787	470 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000008908	-	50	38.732	ENSXCOG00000007499	zbtb41	72	38.732
ENSXCOG00000008908	-	67	49.645	ENSXCOG00000003451	-	90	49.645
ENSXCOG00000008908	-	62	48.780	ENSXCOG00000003438	-	98	48.780
ENSXCOG00000008908	-	56	42.735	ENSXCOG00000007376	-	92	45.588
ENSXCOG00000008908	-	57	45.299	ENSXCOG00000019484	-	95	45.299
ENSXCOG00000008908	-	77	34.435	ENSXCOG00000003484	-	84	34.341
ENSXCOG00000008908	-	79	39.333	ENSXCOG00000009798	-	96	39.333
ENSXCOG00000008908	-	60	45.669	ENSXCOG00000011725	-	97	45.455
ENSXCOG00000008908	-	52	46.835	ENSXCOG00000013066	-	87	46.835
ENSXCOG00000008908	-	60	49.541	ENSXCOG00000009003	-	92	49.541
ENSXCOG00000008908	-	51	44.444	ENSXCOG00000002473	-	96	43.357
ENSXCOG00000008908	-	53	59.344	ENSXCOG00000003435	-	98	61.217
ENSXCOG00000008908	-	75	43.038	ENSXCOG00000012921	-	98	53.061
ENSXCOG00000008908	-	59	47.059	ENSXCOG00000003468	-	99	47.059
ENSXCOG00000008908	-	53	48.182	ENSXCOG00000010488	-	85	48.182
ENSXCOG00000008908	-	55	45.370	ENSXCOG00000016567	-	95	45.370
ENSXCOG00000008908	-	54	47.727	ENSXCOG00000010507	-	65	47.727
ENSXCOG00000008908	-	56	48.872	ENSXCOG00000019443	-	97	47.414
ENSXCOG00000008908	-	76	40.152	ENSXCOG00000003896	-	89	41.481
ENSXCOG00000008908	-	76	54.734	ENSXCOG00000003441	-	91	55.882
ENSXCOG00000008908	-	55	42.963	ENSXCOG00000014361	-	81	42.963
ENSXCOG00000008908	-	79	42.609	ENSXCOG00000014363	-	98	42.609
ENSXCOG00000008908	-	68	43.284	ENSXCOG00000007406	-	98	42.308
ENSXCOG00000008908	-	55	45.185	ENSXCOG00000016860	-	97	47.482
ENSXCOG00000008908	-	52	42.308	ENSXCOG00000001200	-	97	41.791
ENSXCOG00000008908	-	87	43.262	ENSXCOG00000003538	-	97	46.835
ENSXCOG00000008908	-	59	45.161	ENSXCOG00000003530	-	93	44.340
ENSXCOG00000008908	-	72	42.857	ENSXCOG00000003532	-	100	42.857
ENSXCOG00000008908	-	70	42.177	ENSXCOG00000003537	-	90	42.177
ENSXCOG00000008908	-	88	46.565	ENSXCOG00000013004	-	94	48.889
ENSXCOG00000008908	-	76	43.972	ENSXCOG00000003472	-	87	52.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008908	-	59	45.522	ENSORLG00000012434	znf1064	74	47.407	Oryzias_latipes
ENSXCOG00000008908	-	89	42.609	ENSPFOG00000003366	-	95	42.609	Poecilia_formosa
ENSXCOG00000008908	-	51	46.212	ENSPFOG00000022423	-	98	46.212	Poecilia_formosa
ENSXCOG00000008908	-	79	30.052	ENSPLAG00000010547	-	93	30.052	Poecilia_latipinna
ENSXCOG00000008908	-	80	54.703	ENSXMAG00000024816	-	96	54.703	Xiphophorus_maculatus