EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000008943 (Gene tree)
Gene ID: -
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b%2C subunit 2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 9686 bases
Position: chrKQ557206.1:7862587-7872272
Accession: ZDB-GENE-070928-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011827	DUF382	PF04037.13	1.1e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000011963	-	2109	-	ENSXCOP00000011827	702 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008943	sf3b2	84	78.095	ENSG00000087365	SF3B2	99	90.159	Homo_sapiens
ENSXCOG00000008943	sf3b2	90	75.170	ENSAPOG00000001974	sf3b2	83	76.575	Acanthochromis_polyacanthus
ENSXCOG00000008943	sf3b2	84	77.655	ENSAMEG00000017206	SF3B2	70	78.288	Ailuropoda_melanoleuca
ENSXCOG00000008943	sf3b2	93	75.066	ENSACIG00000000624	sf3b2	88	76.184	Amphilophus_citrinellus
ENSXCOG00000008943	sf3b2	93	74.771	ENSAOCG00000009207	sf3b2	82	92.105	Amphiprion_ocellaris
ENSXCOG00000008943	sf3b2	93	75.524	ENSAPEG00000002762	sf3b2	80	92.105	Amphiprion_percula
ENSXCOG00000008943	sf3b2	84	65.348	ENSACAG00000008615	SF3B2	59	71.698	Anolis_carolinensis
ENSXCOG00000008943	sf3b2	84	78.095	ENSANAG00000029120	SF3B2	72	78.571	Aotus_nancymaae
ENSXCOG00000008943	sf3b2	93	76.070	ENSACLG00000014771	sf3b2	88	76.975	Astatotilapia_calliptera
ENSXCOG00000008943	sf3b2	91	81.069	ENSAMXG00000007929	sf3b2	93	82.979	Astyanax_mexicanus
ENSXCOG00000008943	sf3b2	84	77.971	ENSBTAG00000002778	SF3B2	70	78.413	Bos_taurus
ENSXCOG00000008943	sf3b2	78	49.120	WBGene00021004	sftb-2	89	49.174	Caenorhabditis_elegans
ENSXCOG00000008943	sf3b2	84	78.095	ENSCJAG00000001656	SF3B2	72	78.571	Callithrix_jacchus
ENSXCOG00000008943	sf3b2	84	77.778	ENSCAFG00000013033	SF3B2	70	78.413	Canis_familiaris
ENSXCOG00000008943	sf3b2	84	77.778	ENSCAFG00020015382	SF3B2	70	78.413	Canis_lupus_dingo
ENSXCOG00000008943	sf3b2	84	77.971	ENSCHIG00000011211	SF3B2	70	78.254	Capra_hircus
ENSXCOG00000008943	sf3b2	84	77.937	ENSTSYG00000000959	SF3B2	72	78.254	Carlito_syrichta
ENSXCOG00000008943	sf3b2	74	54.614	ENSCAPG00000006065	SF3B2	90	89.831	Cavia_aperea
ENSXCOG00000008943	sf3b2	72	76.007	ENSCPOG00000008294	SF3B2	69	77.656	Cavia_porcellus
ENSXCOG00000008943	sf3b2	84	78.095	ENSCCAG00000035256	SF3B2	72	78.571	Cebus_capucinus
ENSXCOG00000008943	sf3b2	84	78.095	ENSCATG00000042240	SF3B2	72	78.571	Cercocebus_atys
ENSXCOG00000008943	sf3b2	84	77.619	ENSCLAG00000016852	SF3B2	72	79.048	Chinchilla_lanigera
ENSXCOG00000008943	sf3b2	84	78.095	ENSCSAG00000008121	SF3B2	70	78.571	Chlorocebus_sabaeus
ENSXCOG00000008943	sf3b2	64	87.629	ENSCHOG00000001476	SF3B2	51	86.590	Choloepus_hoffmanni
ENSXCOG00000008943	sf3b2	97	73.538	ENSCPBG00000022465	SF3B2	98	73.324	Chrysemys_picta_bellii
ENSXCOG00000008943	sf3b2	75	68.691	ENSCING00000005665	-	84	67.864	Ciona_intestinalis
ENSXCOG00000008943	sf3b2	75	67.730	ENSCSAVG00000002029	-	84	67.108	Ciona_savignyi
ENSXCOG00000008943	sf3b2	84	78.095	ENSCANG00000039680	SF3B2	72	78.571	Colobus_angolensis_palliatus
ENSXCOG00000008943	sf3b2	84	77.937	ENSCGRG00001015741	Sf3b2	72	78.254	Cricetulus_griseus_chok1gshd
ENSXCOG00000008943	sf3b2	84	77.937	ENSCGRG00000018110	Sf3b2	74	78.254	Cricetulus_griseus_crigri
ENSXCOG00000008943	sf3b2	96	76.087	ENSCSEG00000000230	sf3b2	91	78.022	Cynoglossus_semilaevis
ENSXCOG00000008943	sf3b2	95	82.228	ENSCVAG00000003357	sf3b2	89	82.672	Cyprinodon_variegatus
ENSXCOG00000008943	sf3b2	92	78.235	ENSDARG00000018049	sf3b2	80	79.118	Danio_rerio
ENSXCOG00000008943	sf3b2	84	77.302	ENSDNOG00000009484	SF3B2	79	77.778	Dasypus_novemcinctus
ENSXCOG00000008943	sf3b2	84	77.778	ENSDORG00000002495	Sf3b2	72	77.460	Dipodomys_ordii
ENSXCOG00000008943	sf3b2	75	77.444	ENSEBUG00000013703	sf3b2	58	78.195	Eptatretus_burgeri
ENSXCOG00000008943	sf3b2	84	77.937	ENSEASG00005004508	SF3B2	70	78.730	Equus_asinus_asinus
ENSXCOG00000008943	sf3b2	84	77.937	ENSECAG00000024461	SF3B2	70	78.730	Equus_caballus
ENSXCOG00000008943	sf3b2	95	81.776	ENSELUG00000005586	sf3b2	85	79.523	Esox_lucius
ENSXCOG00000008943	sf3b2	84	77.778	ENSFCAG00000013289	SF3B2	72	78.413	Felis_catus
ENSXCOG00000008943	sf3b2	84	67.846	ENSFALG00000014653	SF3B2	89	67.897	Ficedula_albicollis
ENSXCOG00000008943	sf3b2	93	70.917	ENSFDAG00000019806	SF3B2	75	72.222	Fukomys_damarensis
ENSXCOG00000008943	sf3b2	96	79.432	ENSFHEG00000020968	sf3b2	91	81.306	Fundulus_heteroclitus
ENSXCOG00000008943	sf3b2	93	99.241	ENSGAFG00000001675	sf3b2	91	83.760	Gambusia_affinis
ENSXCOG00000008943	sf3b2	75	92.830	ENSGACG00000019012	sf3b2	97	84.351	Gasterosteus_aculeatus
ENSXCOG00000008943	sf3b2	84	79.206	ENSGAGG00000023916	SF3B2	86	70.732	Gopherus_agassizii
ENSXCOG00000008943	sf3b2	73	89.518	ENSGGOG00000028448	SF3B2	68	89.518	Gorilla_gorilla
ENSXCOG00000008943	sf3b2	93	76.070	ENSHBUG00000017349	sf3b2	88	76.841	Haplochromis_burtoni
ENSXCOG00000008943	sf3b2	84	77.619	ENSHGLG00000010807	SF3B2	72	79.048	Heterocephalus_glaber_female
ENSXCOG00000008943	sf3b2	84	77.619	ENSHGLG00100006361	SF3B2	72	79.048	Heterocephalus_glaber_male
ENSXCOG00000008943	sf3b2	96	71.851	ENSHCOG00000016203	sf3b2	89	74.700	Hippocampus_comes
ENSXCOG00000008943	sf3b2	85	80.655	ENSIPUG00000009383	sf3b2	76	77.193	Ictalurus_punctatus
ENSXCOG00000008943	sf3b2	84	78.095	ENSSTOG00000028892	SF3B2	72	78.254	Ictidomys_tridecemlineatus
ENSXCOG00000008943	sf3b2	84	78.130	ENSJJAG00000018193	Sf3b2	72	78.254	Jaculus_jaculus
ENSXCOG00000008943	sf3b2	90	94.140	ENSKMAG00000020181	sf3b2	77	94.140	Kryptolebias_marmoratus
ENSXCOG00000008943	sf3b2	88	81.886	ENSLBEG00000027739	sf3b2	95	83.234	Labrus_bergylta
ENSXCOG00000008943	sf3b2	84	78.268	ENSLACG00000010429	SF3B2	72	77.294	Latimeria_chalumnae
ENSXCOG00000008943	sf3b2	84	77.813	ENSLAFG00000002128	SF3B2	72	78.095	Loxodonta_africana
ENSXCOG00000008943	sf3b2	84	77.971	ENSMFAG00000003064	SF3B2	72	78.447	Macaca_fascicularis
ENSXCOG00000008943	sf3b2	84	72.857	ENSMMUG00000011743	SF3B2	72	73.333	Macaca_mulatta
ENSXCOG00000008943	sf3b2	84	78.095	ENSMNEG00000034437	SF3B2	72	78.571	Macaca_nemestrina
ENSXCOG00000008943	sf3b2	84	78.130	ENSMLEG00000029373	SF3B2	72	78.571	Mandrillus_leucophaeus
ENSXCOG00000008943	sf3b2	82	92.937	ENSMAMG00000014103	sf3b2	87	75.948	Mastacembelus_armatus
ENSXCOG00000008943	sf3b2	93	76.070	ENSMZEG00005020789	sf3b2	87	76.975	Maylandia_zebra
ENSXCOG00000008943	sf3b2	51	88.333	ENSMAUG00000017040	Sf3b2	65	88.333	Mesocricetus_auratus
ENSXCOG00000008943	sf3b2	84	77.207	ENSMICG00000016942	-	87	69.418	Microcebus_murinus
ENSXCOG00000008943	sf3b2	84	77.778	ENSMICG00000008565	-	72	78.095	Microcebus_murinus
ENSXCOG00000008943	sf3b2	84	78.095	ENSMOCG00000003136	Sf3b2	72	78.254	Microtus_ochrogaster
ENSXCOG00000008943	sf3b2	93	75.741	ENSMMOG00000012928	sf3b2	87	76.319	Mola_mola
ENSXCOG00000008943	sf3b2	84	72.468	ENSMODG00000025020	-	83	79.924	Monodelphis_domestica
ENSXCOG00000008943	sf3b2	84	77.883	ENSMODG00000008490	-	78	77.883	Monodelphis_domestica
ENSXCOG00000008943	sf3b2	93	77.049	ENSMALG00000015137	sf3b2	86	79.315	Monopterus_albus
ENSXCOG00000008943	sf3b2	84	77.937	MGP_CAROLIEiJ_G0022539	Sf3b2	72	78.571	Mus_caroli
ENSXCOG00000008943	sf3b2	84	78.254	ENSMUSG00000024853	Sf3b2	72	78.413	Mus_musculus
ENSXCOG00000008943	sf3b2	84	77.778	MGP_PahariEiJ_G0014036	Sf3b2	72	78.095	Mus_pahari
ENSXCOG00000008943	sf3b2	84	78.254	MGP_SPRETEiJ_G0023453	Sf3b2	72	78.413	Mus_spretus
ENSXCOG00000008943	sf3b2	84	77.778	ENSMPUG00000011349	SF3B2	70	78.413	Mustela_putorius_furo
ENSXCOG00000008943	sf3b2	84	77.302	ENSMLUG00000011136	SF3B2	70	78.254	Myotis_lucifugus
ENSXCOG00000008943	sf3b2	84	77.937	ENSNGAG00000012103	Sf3b2	72	77.937	Nannospalax_galili
ENSXCOG00000008943	sf3b2	84	75.430	ENSNLEG00000006007	SF3B2	60	85.283	Nomascus_leucogenys
ENSXCOG00000008943	sf3b2	73	84.091	ENSMEUG00000000019	SF3B2	66	84.091	Notamacropus_eugenii
ENSXCOG00000008943	sf3b2	84	73.175	ENSODEG00000017764	SF3B2	71	74.286	Octodon_degus
ENSXCOG00000008943	sf3b2	93	76.689	ENSONIG00000013068	sf3b2	90	75.826	Oreochromis_niloticus
ENSXCOG00000008943	sf3b2	84	71.069	ENSOANG00000012482	SF3B2	65	81.782	Ornithorhynchus_anatinus
ENSXCOG00000008943	sf3b2	56	52.719	ENSOCUG00000024154	-	60	59.091	Oryctolagus_cuniculus
ENSXCOG00000008943	sf3b2	84	77.655	ENSOCUG00000015722	-	74	77.619	Oryctolagus_cuniculus
ENSXCOG00000008943	sf3b2	95	77.866	ENSORLG00000008235	sf3b2	86	78.629	Oryzias_latipes
ENSXCOG00000008943	sf3b2	95	77.866	ENSORLG00020005357	sf3b2	89	78.629	Oryzias_latipes_hni
ENSXCOG00000008943	sf3b2	95	86.478	ENSORLG00015022454	sf3b2	91	86.170	Oryzias_latipes_hsok
ENSXCOG00000008943	sf3b2	93	79.245	ENSOMEG00000017480	sf3b2	89	79.380	Oryzias_melastigma
ENSXCOG00000008943	sf3b2	78	83.900	ENSOGAG00000005799	SF3B2	59	87.736	Otolemur_garnettii
ENSXCOG00000008943	sf3b2	84	77.971	ENSOARG00000002125	SF3B2	86	78.254	Ovis_aries
ENSXCOG00000008943	sf3b2	84	78.095	ENSPPAG00000007359	SF3B2	71	78.571	Pan_paniscus
ENSXCOG00000008943	sf3b2	84	77.778	ENSPPRG00000013334	SF3B2	72	78.413	Panthera_pardus
ENSXCOG00000008943	sf3b2	84	77.778	ENSPTIG00000015022	SF3B2	72	78.413	Panthera_tigris_altaica
ENSXCOG00000008943	sf3b2	84	78.095	ENSPTRG00000003912	SF3B2	71	78.571	Pan_troglodytes
ENSXCOG00000008943	sf3b2	84	78.095	ENSPANG00000008593	SF3B2	72	78.571	Papio_anubis
ENSXCOG00000008943	sf3b2	94	82.799	ENSPKIG00000016576	sf3b2	97	82.774	Paramormyrops_kingsleyae
ENSXCOG00000008943	sf3b2	97	74.074	ENSPSIG00000003158	SF3B2	94	74.716	Pelodiscus_sinensis
ENSXCOG00000008943	sf3b2	91	75.069	ENSPMGG00000000819	sf3b2	86	75.620	Periophthalmus_magnuspinnatus
ENSXCOG00000008943	sf3b2	94	65.253	ENSPEMG00000015451	-	78	73.977	Peromyscus_maniculatus_bairdii
ENSXCOG00000008943	sf3b2	84	77.937	ENSPEMG00000015437	Sf3b2	72	78.254	Peromyscus_maniculatus_bairdii
ENSXCOG00000008943	sf3b2	84	77.883	ENSPCIG00000008381	SF3B2	62	88.091	Phascolarctos_cinereus
ENSXCOG00000008943	sf3b2	99	81.830	ENSPFOG00000002552	sf3b2	91	82.737	Poecilia_formosa
ENSXCOG00000008943	sf3b2	96	82.592	ENSPLAG00000001471	sf3b2	91	82.992	Poecilia_latipinna
ENSXCOG00000008943	sf3b2	96	82.438	ENSPMEG00000013180	sf3b2	91	82.714	Poecilia_mexicana
ENSXCOG00000008943	sf3b2	98	84.852	ENSPREG00000002665	sf3b2	91	84.852	Poecilia_reticulata
ENSXCOG00000008943	sf3b2	50	72.589	ENSPPYG00000003034	-	59	73.350	Pongo_abelii
ENSXCOG00000008943	sf3b2	84	78.095	ENSPCAG00000005129	SF3B2	70	78.413	Procavia_capensis
ENSXCOG00000008943	sf3b2	84	77.937	ENSPCOG00000025375	SF3B2	72	78.413	Propithecus_coquereli
ENSXCOG00000008943	sf3b2	90	79.365	ENSPNYG00000023594	sf3b2	93	80.692	Pundamilia_nyererei
ENSXCOG00000008943	sf3b2	80	91.132	ENSPNAG00000001891	sf3b2	79	79.412	Pygocentrus_nattereri
ENSXCOG00000008943	sf3b2	84	77.937	ENSRNOG00000020412	Sf3b2	72	78.095	Rattus_norvegicus
ENSXCOG00000008943	sf3b2	84	77.937	ENSRBIG00000034065	SF3B2	72	78.571	Rhinopithecus_bieti
ENSXCOG00000008943	sf3b2	84	77.937	ENSRROG00000034496	SF3B2	72	78.571	Rhinopithecus_roxellana
ENSXCOG00000008943	sf3b2	84	78.095	ENSSBOG00000026337	SF3B2	71	78.571	Saimiri_boliviensis_boliviensis
ENSXCOG00000008943	sf3b2	75	73.308	ENSSHAG00000018043	-	64	73.120	Sarcophilus_harrisii
ENSXCOG00000008943	sf3b2	84	75.199	ENSSHAG00000010933	-	70	75.676	Sarcophilus_harrisii
ENSXCOG00000008943	sf3b2	85	81.861	ENSSFOG00015021125	sf3b2	72	83.438	Scleropages_formosus
ENSXCOG00000008943	sf3b2	80	93.499	ENSSMAG00000004079	sf3b2	89	77.454	Scophthalmus_maximus
ENSXCOG00000008943	sf3b2	94	88.095	ENSSDUG00000008499	sf3b2	82	91.625	Seriola_dumerili
ENSXCOG00000008943	sf3b2	80	95.220	ENSSLDG00000006838	sf3b2	87	77.513	Seriola_lalandi_dorsalis
ENSXCOG00000008943	sf3b2	84	79.233	ENSSPUG00000009198	SF3B2	61	88.636	Sphenodon_punctatus
ENSXCOG00000008943	sf3b2	93	73.785	ENSSPAG00000004406	sf3b2	87	75.385	Stegastes_partitus
ENSXCOG00000008943	sf3b2	84	78.095	ENSSSCG00000012957	SF3B2	70	78.413	Sus_scrofa
ENSXCOG00000008943	sf3b2	93	77.496	ENSTRUG00000007611	sf3b2	95	78.625	Takifugu_rubripes
ENSXCOG00000008943	sf3b2	92	74.895	ENSTNIG00000007441	sf3b2	89	73.517	Tetraodon_nigroviridis
ENSXCOG00000008943	sf3b2	84	70.833	ENSTBEG00000004258	SF3B2	63	87.857	Tupaia_belangeri
ENSXCOG00000008943	sf3b2	84	77.971	ENSTTRG00000014339	SF3B2	70	78.413	Tursiops_truncatus
ENSXCOG00000008943	sf3b2	80	77.265	ENSUAMG00000020754	SF3B2	66	77.741	Ursus_americanus
ENSXCOG00000008943	sf3b2	84	77.778	ENSUMAG00000010994	SF3B2	70	78.413	Ursus_maritimus
ENSXCOG00000008943	sf3b2	84	77.619	ENSVVUG00000027029	SF3B2	70	78.413	Vulpes_vulpes
ENSXCOG00000008943	sf3b2	84	74.960	ENSXETG00000008422	sf3b2	80	75.478	Xenopus_tropicalis
ENSXCOG00000008943	sf3b2	93	99.810	ENSXMAG00000008467	sf3b2	91	83.969	Xiphophorus_maculatus