EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000008991 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 12360 bases
Position: chrKQ557225.1:42370268-42382627
Accession: ZDB-GENE-040825-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011879	RRM_1	PF00076.22	1.1e-19	1	1
ENSXCOP00000011879	U1snRNP70_N	PF12220.8	3.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012015	-	1371	-	ENSXCOP00000011879	456 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000008991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000008991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000008991	snrnp70	100	69.197	ENSAPEG00000006219	snrnp70	100	63.774	Amphiprion_percula
ENSXCOG00000008991	snrnp70	100	88.312	ENSGAFG00000003395	snrnp70	100	88.528	Gambusia_affinis
ENSXCOG00000008991	snrnp70	71	89.418	ENSMMOG00000005467	snrnp70	75	84.135	Mola_mola
ENSXCOG00000008991	snrnp70	56	60.700	ENSPSIG00000015251	SNRNP70	76	71.429	Pelodiscus_sinensis
ENSXCOG00000008991	snrnp70	100	90.129	ENSPMEG00000008496	snrnp70	100	89.270	Poecilia_mexicana
ENSXCOG00000008991	snrnp70	100	94.143	ENSPREG00000005486	snrnp70	100	94.143	Poecilia_reticulata
ENSXCOG00000008991	snrnp70	100	67.241	ENSSMAG00000013978	snrnp70	72	84.615	Scophthalmus_maximus
ENSXCOG00000008991	snrnp70	100	99.561	ENSXMAG00000012789	snrnp70	100	99.561	Xiphophorus_maculatus