EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000009005 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 792 bases
Position: chrKQ557206.1:8309725-8310516
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000011893	MMR_HSR1	PF01926.23	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012029	-	792	-	ENSXCOP00000011893	263 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009005's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000009005	-	68	32.240	ENSXCOG00000014517	-	62	32.240
ENSXCOG00000009005	-	73	32.990	ENSXCOG00000014518	-	56	32.990
ENSXCOG00000009005	-	71	34.000	ENSXCOG00000006802	-	66	34.000
ENSXCOG00000009005	-	73	33.333	ENSXCOG00000006801	-	59	32.353
ENSXCOG00000009005	-	75	34.673	ENSXCOG00000018338	-	79	34.536
ENSXCOG00000009005	-	70	36.458	ENSXCOG00000018335	-	67	36.458
ENSXCOG00000009005	-	93	32.171	ENSXCOG00000011339	-	70	35.176
ENSXCOG00000009005	-	68	31.522	ENSXCOG00000018342	-	60	31.522
ENSXCOG00000009005	-	70	35.979	ENSXCOG00000009883	-	60	35.979
ENSXCOG00000009005	-	70	36.316	ENSXCOG00000014966	zgc:113625	77	36.316
ENSXCOG00000009005	-	71	31.443	ENSXCOG00000014967	zgc:172131	89	31.443
ENSXCOG00000009005	-	72	32.663	ENSXCOG00000018034	-	60	32.323
ENSXCOG00000009005	-	73	39.594	ENSXCOG00000009375	si:ch211-113e8.5	72	39.594
ENSXCOG00000009005	-	92	36.269	ENSXCOG00000012536	-	79	35.897
ENSXCOG00000009005	-	75	34.615	ENSXCOG00000018711	-	66	35.149
ENSXCOG00000009005	-	71	35.176	ENSXCOG00000013367	-	62	35.176
ENSXCOG00000009005	-	73	31.527	ENSXCOG00000016292	-	72	31.527
ENSXCOG00000009005	-	71	31.156	ENSXCOG00000016293	-	81	31.156
ENSXCOG00000009005	-	69	32.828	ENSXCOG00000016291	-	88	32.828
ENSXCOG00000009005	-	72	35.000	ENSXCOG00000016294	-	63	33.831
ENSXCOG00000009005	-	73	34.184	ENSXCOG00000017908	-	58	35.354
ENSXCOG00000009005	-	88	34.940	ENSXCOG00000013594	-	77	37.198
ENSXCOG00000009005	-	86	39.035	ENSXCOG00000018421	-	86	42.714
ENSXCOG00000009005	-	92	31.707	ENSXCOG00000019572	-	56	34.872
ENSXCOG00000009005	-	93	32.143	ENSXCOG00000019571	-	61	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009005	-	95	41.270	ENSAPOG00000019154	-	53	42.342	Acanthochromis_polyacanthus
ENSXCOG00000009005	-	68	38.764	ENSACIG00000007737	-	70	38.378	Amphilophus_citrinellus
ENSXCOG00000009005	-	68	44.134	ENSACIG00000009811	-	75	44.134	Amphilophus_citrinellus
ENSXCOG00000009005	-	75	37.745	ENSACIG00000007725	-	72	38.693	Amphilophus_citrinellus
ENSXCOG00000009005	-	69	36.813	ENSAOCG00000003425	-	67	36.813	Amphiprion_ocellaris
ENSXCOG00000009005	-	87	39.286	ENSAOCG00000004579	-	83	42.623	Amphiprion_ocellaris
ENSXCOG00000009005	-	89	41.880	ENSAPEG00000001491	-	62	41.629	Amphiprion_percula
ENSXCOG00000009005	-	86	38.739	ENSAPEG00000014403	-	64	42.162	Amphiprion_percula
ENSXCOG00000009005	-	87	40.884	ENSATEG00000015654	-	64	41.176	Anabas_testudineus
ENSXCOG00000009005	-	81	36.916	ENSATEG00000023053	-	83	39.267	Anabas_testudineus
ENSXCOG00000009005	-	92	41.622	ENSACLG00000014795	-	67	41.622	Astatotilapia_calliptera
ENSXCOG00000009005	-	89	42.162	ENSAMXG00000033117	-	83	34.021	Astyanax_mexicanus
ENSXCOG00000009005	-	90	44.928	ENSAMXG00000030744	-	82	44.928	Astyanax_mexicanus
ENSXCOG00000009005	-	89	43.966	ENSAMXG00000021387	-	67	44.324	Astyanax_mexicanus
ENSXCOG00000009005	-	68	42.935	ENSAMXG00000026085	-	68	42.781	Astyanax_mexicanus
ENSXCOG00000009005	-	75	40.102	ENSAMXG00000006064	-	73	40.102	Astyanax_mexicanus
ENSXCOG00000009005	-	73	38.462	ENSAMXG00000009216	-	92	40.625	Astyanax_mexicanus
ENSXCOG00000009005	-	91	36.957	ENSAMXG00000019109	-	91	42.162	Astyanax_mexicanus
ENSXCOG00000009005	-	87	40.217	ENSCSEG00000021519	-	84	40.761	Cynoglossus_semilaevis
ENSXCOG00000009005	-	92	39.834	ENSCVAG00000003054	-	75	41.818	Cyprinodon_variegatus
ENSXCOG00000009005	-	89	39.834	ENSCVAG00000012268	-	62	43.367	Cyprinodon_variegatus
ENSXCOG00000009005	-	78	40.580	ENSCVAG00000005778	-	71	40.580	Cyprinodon_variegatus
ENSXCOG00000009005	-	93	36.653	ENSDARG00000102683	CR626941.1	77	38.164	Danio_rerio
ENSXCOG00000009005	-	92	43.119	ENSDARG00000063481	si:ch211-214j24.15	59	43.902	Danio_rerio
ENSXCOG00000009005	-	72	40.838	ENSELUG00000003217	-	79	40.838	Esox_lucius
ENSXCOG00000009005	-	71	43.386	ENSELUG00000018709	-	57	43.386	Esox_lucius
ENSXCOG00000009005	-	70	49.730	ENSELUG00000018192	-	87	49.730	Esox_lucius
ENSXCOG00000009005	-	72	52.632	ENSELUG00000024502	-	70	52.632	Esox_lucius
ENSXCOG00000009005	-	73	37.037	ENSFHEG00000020783	-	84	37.037	Fundulus_heteroclitus
ENSXCOG00000009005	-	70	47.541	ENSFHEG00000023334	-	71	47.541	Fundulus_heteroclitus
ENSXCOG00000009005	-	75	38.424	ENSGMOG00000001626	-	100	40.331	Gadus_morhua
ENSXCOG00000009005	-	73	39.344	ENSGAFG00000020826	-	83	39.344	Gambusia_affinis
ENSXCOG00000009005	-	85	38.919	ENSHBUG00000008326	-	97	38.919	Haplochromis_burtoni
ENSXCOG00000009005	-	92	40.642	ENSHBUG00000001242	-	54	40.526	Haplochromis_burtoni
ENSXCOG00000009005	-	74	40.000	ENSHBUG00000016284	-	90	40.000	Haplochromis_burtoni
ENSXCOG00000009005	-	72	40.415	ENSIPUG00000013342	-	62	40.415	Ictalurus_punctatus
ENSXCOG00000009005	-	93	37.705	ENSKMAG00000014605	-	77	37.705	Kryptolebias_marmoratus
ENSXCOG00000009005	-	87	38.528	ENSKMAG00000004774	-	64	42.458	Kryptolebias_marmoratus
ENSXCOG00000009005	-	89	34.746	ENSKMAG00000014764	-	86	37.255	Kryptolebias_marmoratus
ENSXCOG00000009005	-	88	41.949	ENSKMAG00000009600	-	71	43.842	Kryptolebias_marmoratus
ENSXCOG00000009005	-	72	43.386	ENSLBEG00000019652	-	64	43.386	Labrus_bergylta
ENSXCOG00000009005	-	73	48.969	ENSLOCG00000016496	-	54	48.969	Lepisosteus_oculatus
ENSXCOG00000009005	-	70	53.261	ENSLOCG00000017852	-	68	53.261	Lepisosteus_oculatus
ENSXCOG00000009005	-	73	48.438	ENSLOCG00000000082	-	73	47.716	Lepisosteus_oculatus
ENSXCOG00000009005	-	73	47.917	ENSLOCG00000000385	-	62	47.917	Lepisosteus_oculatus
ENSXCOG00000009005	-	73	50.521	ENSLOCG00000000517	-	59	50.521	Lepisosteus_oculatus
ENSXCOG00000009005	-	75	50.761	ENSLOCG00000018072	-	79	50.761	Lepisosteus_oculatus
ENSXCOG00000009005	-	75	51.269	ENSLOCG00000012075	-	90	51.269	Lepisosteus_oculatus
ENSXCOG00000009005	-	85	42.795	ENSMAMG00000021969	-	54	42.233	Mastacembelus_armatus
ENSXCOG00000009005	-	86	43.407	ENSMAMG00000015600	-	66	44.134	Mastacembelus_armatus
ENSXCOG00000009005	-	85	34.222	ENSMAMG00000021970	-	86	35.176	Mastacembelus_armatus
ENSXCOG00000009005	-	69	35.294	ENSMMOG00000016864	-	70	36.364	Mola_mola
ENSXCOG00000009005	-	80	77.619	ENSMMOG00000012876	-	65	77.619	Mola_mola
ENSXCOG00000009005	-	88	37.229	ENSNBRG00000002136	-	61	42.135	Neolamprologus_brichardi
ENSXCOG00000009005	-	90	39.831	ENSORLG00000002537	-	61	40.291	Oryzias_latipes
ENSXCOG00000009005	-	91	40.000	ENSORLG00000002031	-	59	40.741	Oryzias_latipes
ENSXCOG00000009005	-	90	40.000	ENSORLG00020008323	-	58	41.398	Oryzias_latipes_hni
ENSXCOG00000009005	-	91	40.000	ENSORLG00020008286	-	77	40.741	Oryzias_latipes_hni
ENSXCOG00000009005	-	70	33.696	ENSORLG00020017387	-	84	32.821	Oryzias_latipes_hni
ENSXCOG00000009005	-	90	39.655	ENSORLG00020011284	-	74	37.430	Oryzias_latipes_hni
ENSXCOG00000009005	-	90	40.260	ENSORLG00015004110	-	58	41.117	Oryzias_latipes_hsok
ENSXCOG00000009005	-	91	40.000	ENSORLG00015004522	-	57	40.741	Oryzias_latipes_hsok
ENSXCOG00000009005	-	68	34.637	ENSORLG00015023234	-	92	34.637	Oryzias_latipes_hsok
ENSXCOG00000009005	-	91	40.580	ENSOMEG00000010594	-	87	41.489	Oryzias_melastigma
ENSXCOG00000009005	-	92	39.381	ENSOMEG00000020433	-	78	40.385	Oryzias_melastigma
ENSXCOG00000009005	-	90	47.881	ENSPKIG00000017688	-	81	47.863	Paramormyrops_kingsleyae
ENSXCOG00000009005	-	72	50.526	ENSPKIG00000017193	-	81	50.526	Paramormyrops_kingsleyae
ENSXCOG00000009005	-	71	44.086	ENSPMGG00000014055	-	76	44.086	Periophthalmus_magnuspinnatus
ENSXCOG00000009005	-	84	36.036	ENSPMGG00000014056	-	71	38.919	Periophthalmus_magnuspinnatus
ENSXCOG00000009005	-	76	55.122	ENSPMGG00000017993	-	83	54.067	Periophthalmus_magnuspinnatus
ENSXCOG00000009005	-	92	40.807	ENSPFOG00000013349	-	75	41.905	Poecilia_formosa
ENSXCOG00000009005	-	90	41.818	ENSPFOG00000012732	-	72	43.137	Poecilia_formosa
ENSXCOG00000009005	-	92	40.625	ENSPFOG00000016787	-	84	40.104	Poecilia_formosa
ENSXCOG00000009005	-	100	90.114	ENSPFOG00000005689	si:dkey-185m8.2	86	90.114	Poecilia_formosa
ENSXCOG00000009005	-	77	39.674	ENSPFOG00000006124	-	85	39.674	Poecilia_formosa
ENSXCOG00000009005	-	92	41.791	ENSPFOG00000022853	-	86	42.000	Poecilia_formosa
ENSXCOG00000009005	-	78	43.350	ENSPFOG00000015871	-	82	43.350	Poecilia_formosa
ENSXCOG00000009005	-	91	40.991	ENSPFOG00000015875	-	80	42.105	Poecilia_formosa
ENSXCOG00000009005	-	90	45.263	ENSPFOG00000013109	-	85	45.503	Poecilia_formosa
ENSXCOG00000009005	-	91	45.550	ENSPFOG00000015865	-	84	45.789	Poecilia_formosa
ENSXCOG00000009005	-	74	39.899	ENSPFOG00000022479	-	82	39.899	Poecilia_formosa
ENSXCOG00000009005	-	86	39.914	ENSPFOG00000000191	-	69	40.724	Poecilia_formosa
ENSXCOG00000009005	-	70	38.378	ENSPLAG00000018911	-	68	38.378	Poecilia_latipinna
ENSXCOG00000009005	-	79	45.405	ENSPLAG00000020776	-	83	45.405	Poecilia_latipinna
ENSXCOG00000009005	-	70	41.081	ENSPLAG00000018606	-	71	41.081	Poecilia_latipinna
ENSXCOG00000009005	-	90	33.058	ENSPLAG00000018664	-	70	36.869	Poecilia_latipinna
ENSXCOG00000009005	-	92	40.769	ENSPLAG00000003020	-	78	43.541	Poecilia_latipinna
ENSXCOG00000009005	-	72	35.169	ENSPLAG00000018692	-	86	35.593	Poecilia_latipinna
ENSXCOG00000009005	-	90	40.104	ENSPMEG00000000604	-	67	40.104	Poecilia_mexicana
ENSXCOG00000009005	-	70	37.838	ENSPMEG00000018950	-	68	37.838	Poecilia_mexicana
ENSXCOG00000009005	-	71	37.089	ENSPMEG00000000724	-	58	37.089	Poecilia_mexicana
ENSXCOG00000009005	-	87	35.931	ENSPMEG00000006334	-	70	37.313	Poecilia_mexicana
ENSXCOG00000009005	-	86	38.428	ENSPMEG00000020297	-	71	42.000	Poecilia_mexicana
ENSXCOG00000009005	-	90	40.090	ENSPMEG00000005912	-	69	40.952	Poecilia_mexicana
ENSXCOG00000009005	-	62	43.030	ENSPMEG00000020252	-	73	43.293	Poecilia_mexicana
ENSXCOG00000009005	-	63	41.667	ENSPMEG00000010605	-	67	41.667	Poecilia_mexicana
ENSXCOG00000009005	-	90	40.513	ENSPREG00000020440	-	68	40.513	Poecilia_reticulata
ENSXCOG00000009005	-	87	41.593	ENSPREG00000001530	-	63	45.550	Poecilia_reticulata
ENSXCOG00000009005	-	86	40.260	ENSPREG00000001250	-	75	43.979	Poecilia_reticulata
ENSXCOG00000009005	-	91	39.419	ENSPNYG00000010004	-	66	44.149	Pundamilia_nyererei
ENSXCOG00000009005	-	86	38.326	ENSPNAG00000013132	-	63	42.473	Pygocentrus_nattereri
ENSXCOG00000009005	-	89	43.697	ENSPNAG00000002097	-	81	44.762	Pygocentrus_nattereri
ENSXCOG00000009005	-	69	39.459	ENSPNAG00000025850	-	66	39.785	Pygocentrus_nattereri
ENSXCOG00000009005	-	89	43.949	ENSPNAG00000014932	-	61	46.154	Pygocentrus_nattereri
ENSXCOG00000009005	-	84	37.220	ENSPNAG00000019899	-	80	39.000	Pygocentrus_nattereri
ENSXCOG00000009005	-	75	38.579	ENSSFOG00015002420	-	77	38.119	Scleropages_formosus
ENSXCOG00000009005	-	85	34.167	ENSSFOG00015002507	-	69	40.331	Scleropages_formosus
ENSXCOG00000009005	-	91	48.148	ENSSFOG00015002503	-	73	53.125	Scleropages_formosus
ENSXCOG00000009005	-	90	39.662	ENSSMAG00000012187	-	59	42.857	Scophthalmus_maximus
ENSXCOG00000009005	-	90	40.249	ENSSDUG00000022299	-	79	41.509	Seriola_dumerili
ENSXCOG00000009005	-	93	39.419	ENSSLDG00000005786	-	60	42.132	Seriola_lalandi_dorsalis
ENSXCOG00000009005	-	79	40.426	ENSSLDG00000009168	-	84	40.426	Seriola_lalandi_dorsalis
ENSXCOG00000009005	-	89	38.462	ENSSLDG00000010531	-	85	39.362	Seriola_lalandi_dorsalis
ENSXCOG00000009005	-	95	41.036	ENSSPAG00000017616	-	84	41.036	Stegastes_partitus
ENSXCOG00000009005	-	70	44.865	ENSSPAG00000015927	-	74	44.865	Stegastes_partitus
ENSXCOG00000009005	-	84	38.767	ENSTRUG00000020422	-	70	39.320	Takifugu_rubripes
ENSXCOG00000009005	-	90	76.371	ENSTRUG00000018070	-	84	75.403	Takifugu_rubripes
ENSXCOG00000009005	-	88	40.260	ENSTNIG00000004275	-	97	40.260	Tetraodon_nigroviridis
ENSXCOG00000009005	-	75	44.776	ENSTNIG00000004220	-	82	44.500	Tetraodon_nigroviridis
ENSXCOG00000009005	-	83	40.367	ENSXMAG00000023360	-	73	42.079	Xiphophorus_maculatus