EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000009133 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 5375 bases
Position: chrKQ557216.1:20879039-20884413
Accession: ZDB-GENE-040426-1856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012073	zf-RNPHF	PF08080.12	2.4e-11	1	1
ENSXCOP00000012073	RRM_1	PF00076.22	2e-31	1	3
ENSXCOP00000012073	RRM_1	PF00076.22	2e-31	2	3
ENSXCOP00000012073	RRM_1	PF00076.22	2e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012211	-	1212	-	ENSXCOP00000012073	403 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000009133	hnrnph1	83	30.070	ENSXCOG00000014073	rbm12	51	30.464
ENSXCOG00000009133	hnrnph1	51	34.177	ENSXCOG00000019735	-	85	30.303
ENSXCOG00000009133	hnrnph1	82	57.500	ENSXCOG00000012095	hnrnph3	92	58.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009133	hnrnph1	97	94.629	ENSAPOG00000016614	hnrnph1	93	94.629	Acanthochromis_polyacanthus
ENSXCOG00000009133	hnrnph1	99	90.977	ENSACIG00000008964	hnrnph1	99	93.147	Amphilophus_citrinellus
ENSXCOG00000009133	hnrnph1	97	94.629	ENSAOCG00000008372	hnrnph1	93	94.629	Amphiprion_ocellaris
ENSXCOG00000009133	hnrnph1	97	94.373	ENSAPEG00000012980	hnrnph1	93	94.373	Amphiprion_percula
ENSXCOG00000009133	hnrnph1	97	94.373	ENSATEG00000002792	hnrnph1	93	94.373	Anabas_testudineus
ENSXCOG00000009133	hnrnph1	89	82.114	ENSACAG00000016323	-	80	81.572	Anolis_carolinensis
ENSXCOG00000009133	hnrnph1	88	95.493	ENSACLG00000003313	hnrnph1	97	95.493	Astatotilapia_calliptera
ENSXCOG00000009133	hnrnph1	97	80.867	ENSAMXG00000030703	hnrnph1l	79	82.653	Astyanax_mexicanus
ENSXCOG00000009133	hnrnph1	98	83.417	ENSAMXG00000002483	hnrnph1	99	84.887	Astyanax_mexicanus
ENSXCOG00000009133	hnrnph1	97	90.537	ENSCSEG00000015891	hnrnph1	98	92.072	Cynoglossus_semilaevis
ENSXCOG00000009133	hnrnph1	97	93.606	ENSCVAG00000014097	hnrnph1	93	93.606	Cyprinodon_variegatus
ENSXCOG00000009133	hnrnph1	98	82.957	ENSDARG00000040881	hnrnph1	94	84.635	Danio_rerio
ENSXCOG00000009133	hnrnph1	97	83.929	ENSDARG00000005551	hnrnph1l	92	85.714	Danio_rerio
ENSXCOG00000009133	hnrnph1	96	90.026	ENSELUG00000006715	hnrnph1	94	90.026	Esox_lucius
ENSXCOG00000009133	hnrnph1	97	80.506	ENSELUG00000021437	-	99	83.291	Esox_lucius
ENSXCOG00000009133	hnrnph1	97	90.793	ENSFHEG00000008474	hnrnph1	93	92.327	Fundulus_heteroclitus
ENSXCOG00000009133	hnrnph1	99	86.275	ENSGMOG00000006782	hnrnph1	98	88.861	Gadus_morhua
ENSXCOG00000009133	hnrnph1	97	95.908	ENSGAFG00000006280	hnrnph1	93	95.908	Gambusia_affinis
ENSXCOG00000009133	hnrnph1	99	86.232	ENSGACG00000018352	hnrnph1	98	85.122	Gasterosteus_aculeatus
ENSXCOG00000009133	hnrnph1	88	95.493	ENSHBUG00000010547	hnrnph1	98	95.493	Haplochromis_burtoni
ENSXCOG00000009133	hnrnph1	97	88.776	ENSHCOG00000004513	hnrnph1	93	89.541	Hippocampus_comes
ENSXCOG00000009133	hnrnph1	92	82.480	ENSIPUG00000018262	hnrnph1	92	84.010	Ictalurus_punctatus
ENSXCOG00000009133	hnrnph1	96	79.028	ENSIPUG00000024047	hnrnph1l	90	81.586	Ictalurus_punctatus
ENSXCOG00000009133	hnrnph1	98	90.380	ENSKMAG00000018802	hnrnph1	93	92.327	Kryptolebias_marmoratus
ENSXCOG00000009133	hnrnph1	97	92.839	ENSLBEG00000027811	hnrnph1	92	92.839	Labrus_bergylta
ENSXCOG00000009133	hnrnph1	96	84.158	ENSLOCG00000012510	hnrnph1	91	84.615	Lepisosteus_oculatus
ENSXCOG00000009133	hnrnph1	90	57.880	ENSMMUG00000017392	-	83	56.316	Macaca_mulatta
ENSXCOG00000009133	hnrnph1	90	57.880	ENSMNEG00000030544	-	83	56.316	Macaca_nemestrina
ENSXCOG00000009133	hnrnph1	91	93.280	ENSMAMG00000011478	hnrnph1	99	93.280	Mastacembelus_armatus
ENSXCOG00000009133	hnrnph1	97	94.373	ENSMZEG00005009791	hnrnph1	93	94.373	Maylandia_zebra
ENSXCOG00000009133	hnrnph1	98	91.667	ENSMMOG00000009064	hnrnph1	99	91.878	Mola_mola
ENSXCOG00000009133	hnrnph1	79	51.765	ENSMODG00000002200	-	99	52.239	Monodelphis_domestica
ENSXCOG00000009133	hnrnph1	89	96.111	ENSMALG00000003999	hnrnph1	99	96.111	Monopterus_albus
ENSXCOG00000009133	hnrnph1	88	95.493	ENSNBRG00000015406	hnrnph1	98	95.493	Neolamprologus_brichardi
ENSXCOG00000009133	hnrnph1	97	94.373	ENSONIG00000017754	hnrnph1	93	94.373	Oreochromis_niloticus
ENSXCOG00000009133	hnrnph1	97	94.118	ENSORLG00000006932	hnrnph1	93	94.118	Oryzias_latipes
ENSXCOG00000009133	hnrnph1	97	94.118	ENSORLG00020007881	hnrnph1	93	94.118	Oryzias_latipes_hni
ENSXCOG00000009133	hnrnph1	97	94.118	ENSORLG00015005306	hnrnph1	93	94.118	Oryzias_latipes_hsok
ENSXCOG00000009133	hnrnph1	97	94.885	ENSOMEG00000009827	hnrnph1	99	94.643	Oryzias_melastigma
ENSXCOG00000009133	hnrnph1	91	82.850	ENSPKIG00000009532	-	92	81.773	Paramormyrops_kingsleyae
ENSXCOG00000009133	hnrnph1	97	85.025	ENSPKIG00000018203	hnrnph1l	93	86.548	Paramormyrops_kingsleyae
ENSXCOG00000009133	hnrnph1	97	88.747	ENSPMGG00000012151	hnrnph1	93	90.281	Periophthalmus_magnuspinnatus
ENSXCOG00000009133	hnrnph1	100	93.612	ENSPFOG00000004097	hnrnph1	97	93.612	Poecilia_formosa
ENSXCOG00000009133	hnrnph1	97	95.396	ENSPLAG00000011771	hnrnph1	93	95.396	Poecilia_latipinna
ENSXCOG00000009133	hnrnph1	97	95.652	ENSPMEG00000019446	hnrnph1	93	95.652	Poecilia_mexicana
ENSXCOG00000009133	hnrnph1	97	96.164	ENSPREG00000005780	hnrnph1	93	96.164	Poecilia_reticulata
ENSXCOG00000009133	hnrnph1	97	94.373	ENSPNYG00000000204	hnrnph1	98	95.493	Pundamilia_nyererei
ENSXCOG00000009133	hnrnph1	96	81.586	ENSPNAG00000002784	hnrnph1l	98	83.565	Pygocentrus_nattereri
ENSXCOG00000009133	hnrnph1	98	85.930	ENSPNAG00000000439	hnrnph1	98	85.894	Pygocentrus_nattereri
ENSXCOG00000009133	hnrnph1	97	84.518	ENSSFOG00015016055	-	93	86.041	Scleropages_formosus
ENSXCOG00000009133	hnrnph1	97	88.071	ENSSFOG00015022796	hnrnph1l	100	85.894	Scleropages_formosus
ENSXCOG00000009133	hnrnph1	99	91.206	ENSSMAG00000007820	hnrnph1	96	89.750	Scophthalmus_maximus
ENSXCOG00000009133	hnrnph1	97	94.629	ENSSDUG00000008785	hnrnph1	93	94.629	Seriola_dumerili
ENSXCOG00000009133	hnrnph1	97	94.629	ENSSLDG00000010685	hnrnph1	93	94.629	Seriola_lalandi_dorsalis
ENSXCOG00000009133	hnrnph1	97	94.373	ENSSPAG00000009921	hnrnph1	92	94.373	Stegastes_partitus
ENSXCOG00000009133	hnrnph1	97	90.026	ENSTRUG00000020069	hnrnph1	93	91.560	Takifugu_rubripes
ENSXCOG00000009133	hnrnph1	95	77.387	ENSXETG00000018321	hnrnph1	85	80.429	Xenopus_tropicalis
ENSXCOG00000009133	hnrnph1	98	95.960	ENSXMAG00000021332	hnrnph1	100	95.960	Xiphophorus_maculatus