EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000009190 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: zgc:92772
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 4471 bases
Position: chrKQ557224.1:8786447-8790917
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012150	MMR_HSR1	PF01926.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012290	-	657	-	ENSXCOP00000012150	218 (aa)	-	UPI00022B0D84

Gene Model

Click here to download ENSXCOG00000009190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009190's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000009190	-	84	41.398	ENSXCOG00000003428	rab42a	85	41.398
ENSXCOG00000009190	-	81	40.110	ENSXCOG00000020575	RAB9A	80	40.110
ENSXCOG00000009190	-	94	31.944	ENSXCOG00000009541	rab34a	80	31.944
ENSXCOG00000009190	-	74	34.568	ENSXCOG00000020608	hrasb	91	35.632
ENSXCOG00000009190	-	72	36.943	ENSXCOG00000006259	rab6a	75	36.943
ENSXCOG00000009190	-	81	46.023	ENSXCOG00000019533	rab13	94	46.023
ENSXCOG00000009190	-	96	43.602	ENSXCOG00000010695	zgc:171927	99	43.602
ENSXCOG00000009190	-	78	38.043	ENSXCOG00000000469	rab33ba	76	38.043
ENSXCOG00000009190	-	78	40.462	ENSXCOG00000018683	zgc:101559	74	40.462
ENSXCOG00000009190	-	73	30.120	ENSXCOG00000013226	rasd4	77	30.120
ENSXCOG00000009190	-	95	38.208	ENSXCOG00000019310	rab12	83	38.208
ENSXCOG00000009190	-	79	35.465	ENSXCOG00000011864	rab23	80	35.079
ENSXCOG00000009190	-	66	43.333	ENSXCOG00000012032	-	68	43.333
ENSXCOG00000009190	-	80	38.547	ENSXCOG00000019054	rab9a	80	38.547
ENSXCOG00000009190	-	59	31.061	ENSXCOG00000011229	rras2	85	30.128
ENSXCOG00000009190	-	75	46.626	ENSXCOG00000006300	-	89	42.157
ENSXCOG00000009190	-	61	96.992	ENSXCOG00000009194	-	98	96.992
ENSXCOG00000009190	-	72	39.877	ENSXCOG00000019921	rab7a	78	39.877
ENSXCOG00000009190	-	81	50.847	ENSXCOG00000010770	-	71	50.847
ENSXCOG00000009190	-	94	40.291	ENSXCOG00000020121	rab5aa	90	40.291
ENSXCOG00000009190	-	99	63.761	ENSXCOG00000020125	rab25a	89	77.099
ENSXCOG00000009190	-	64	46.429	ENSXCOG00000003192	-	65	46.429
ENSXCOG00000009190	-	80	46.591	ENSXCOG00000006807	rab39bb	83	46.591
ENSXCOG00000009190	-	93	33.824	ENSXCOG00000007650	rras	94	33.824
ENSXCOG00000009190	-	72	42.857	ENSXCOG00000009094	rab9b	79	42.857
ENSXCOG00000009190	-	100	86.239	ENSXCOG00000001357	rab11a	82	86.239
ENSXCOG00000009190	-	83	72.376	ENSXCOG00000004227	rab25b	100	62.844
ENSXCOG00000009190	-	99	80.556	ENSXCOG00000004226	rab11al	99	80.556
ENSXCOG00000009190	-	66	34.028	ENSXCOG00000019281	rheb	79	34.028
ENSXCOG00000009190	-	75	47.239	ENSXCOG00000016788	rab5c	76	47.239
ENSXCOG00000009190	-	78	51.176	ENSXCOG00000013842	rab1ab	84	51.176
ENSXCOG00000009190	-	72	35.669	ENSXCOG00000002232	rab6bb	75	35.669
ENSXCOG00000009190	-	82	38.043	ENSXCOG00000013344	rab33a	64	38.043
ENSXCOG00000009190	-	53	31.092	ENSXCOG00000003892	arl4d	58	31.092
ENSXCOG00000009190	-	94	33.333	ENSXCOG00000016370	RAB29	98	33.333
ENSXCOG00000009190	-	74	43.478	ENSXCOG00000016452	rab22a	83	43.478
ENSXCOG00000009190	-	72	36.306	ENSXCOG00000015802	RAB41	74	36.306
ENSXCOG00000009190	-	95	33.032	ENSXCOG00000008410	si:dkey-34d22.5	97	33.032
ENSXCOG00000009190	-	100	97.706	ENSXCOG00000008042	-	100	97.706
ENSXCOG00000009190	-	70	34.839	ENSXCOG00000020508	kras	87	35.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009190	-	100	97.706	ENSAPOG00000023455	rab11bb	100	97.706	Acanthochromis_polyacanthus
ENSXCOG00000009190	-	100	85.780	ENSACIG00000019631	rab11bb	100	85.780	Amphilophus_citrinellus
ENSXCOG00000009190	-	100	100.000	ENSACIG00000024376	-	100	100.000	Amphilophus_citrinellus
ENSXCOG00000009190	-	100	100.000	ENSAOCG00000018849	-	100	100.000	Amphiprion_ocellaris
ENSXCOG00000009190	-	100	97.706	ENSAOCG00000018239	rab11bb	100	97.706	Amphiprion_ocellaris
ENSXCOG00000009190	-	100	97.706	ENSAPEG00000016590	rab11bb	100	97.706	Amphiprion_percula
ENSXCOG00000009190	-	100	99.541	ENSATEG00000023725	-	100	99.541	Anabas_testudineus
ENSXCOG00000009190	-	100	97.706	ENSATEG00000017696	rab11bb	100	97.706	Anabas_testudineus
ENSXCOG00000009190	-	94	98.544	ENSAPLG00000011046	-	94	98.544	Anas_platyrhynchos
ENSXCOG00000009190	-	100	100.000	ENSACLG00000005446	-	100	100.000	Astatotilapia_calliptera
ENSXCOG00000009190	-	100	97.706	ENSACLG00000007076	rab11bb	100	97.706	Astatotilapia_calliptera
ENSXCOG00000009190	-	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSXCOG00000009190	-	100	99.083	ENSAMXG00000042655	rab11bb	100	99.083	Astyanax_mexicanus
ENSXCOG00000009190	-	100	96.789	ENSBTAG00000002475	RAB11B	100	96.789	Bos_taurus
ENSXCOG00000009190	-	96	95.215	ENSCHIG00000022426	-	93	95.215	Capra_hircus
ENSXCOG00000009190	-	100	96.789	ENSCATG00000029188	-	100	96.789	Cercocebus_atys
ENSXCOG00000009190	-	100	97.706	ENSCPBG00000017056	-	100	97.706	Chrysemys_picta_bellii
ENSXCOG00000009190	-	100	97.706	ENSCSEG00000012149	rab11bb	100	97.706	Cynoglossus_semilaevis
ENSXCOG00000009190	-	100	99.541	ENSCSEG00000007239	-	100	99.541	Cynoglossus_semilaevis
ENSXCOG00000009190	-	100	95.872	ENSCVAG00000019751	-	100	95.872	Cyprinodon_variegatus
ENSXCOG00000009190	-	100	99.083	ENSCVAG00000019718	-	100	99.083	Cyprinodon_variegatus
ENSXCOG00000009190	-	100	97.706	ENSCVAG00000017021	-	100	97.706	Cyprinodon_variegatus
ENSXCOG00000009190	-	100	97.706	ENSDARG00000090086	rab11bb	100	97.706	Danio_rerio
ENSXCOG00000009190	-	99	94.470	ENSETEG00000000905	-	99	94.470	Echinops_telfairi
ENSXCOG00000009190	-	99	94.419	ENSEASG00005003708	-	99	94.419	Equus_asinus_asinus
ENSXCOG00000009190	-	99	94.419	ENSECAG00000000716	RAB11B	99	94.419	Equus_caballus
ENSXCOG00000009190	-	100	97.706	ENSELUG00000000916	-	100	97.706	Esox_lucius
ENSXCOG00000009190	-	100	97.706	ENSELUG00000021148	rab11bb	100	97.706	Esox_lucius
ENSXCOG00000009190	-	100	98.624	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSXCOG00000009190	-	100	97.706	ENSFALG00000011828	-	100	97.706	Ficedula_albicollis
ENSXCOG00000009190	-	100	99.541	ENSFHEG00000022676	-	100	99.541	Fundulus_heteroclitus
ENSXCOG00000009190	-	100	97.706	ENSFHEG00000018353	rab11bb	100	97.706	Fundulus_heteroclitus
ENSXCOG00000009190	-	100	97.706	ENSGMOG00000009211	rab11bb	100	97.706	Gadus_morhua
ENSXCOG00000009190	-	99	95.370	ENSGMOG00000009668	-	99	95.370	Gadus_morhua
ENSXCOG00000009190	-	100	97.706	ENSGALG00000000613	RAB11B	100	97.706	Gallus_gallus
ENSXCOG00000009190	-	100	97.706	ENSGAFG00000007102	rab11bb	100	97.706	Gambusia_affinis
ENSXCOG00000009190	-	100	97.248	ENSGACG00000015479	rab11bb	100	97.248	Gasterosteus_aculeatus
ENSXCOG00000009190	-	100	95.413	ENSGACG00000013297	-	99	95.413	Gasterosteus_aculeatus
ENSXCOG00000009190	-	100	96.789	ENSGGOG00000014516	RAB11B	100	96.789	Gorilla_gorilla
ENSXCOG00000009190	-	100	97.706	ENSHBUG00000014777	rab11bb	100	97.706	Haplochromis_burtoni
ENSXCOG00000009190	-	100	100.000	ENSHBUG00000009947	-	100	100.000	Haplochromis_burtoni
ENSXCOG00000009190	-	100	93.578	ENSHCOG00000000985	-	100	93.578	Hippocampus_comes
ENSXCOG00000009190	-	100	96.789	ENSHCOG00000000954	-	100	96.789	Hippocampus_comes
ENSXCOG00000009190	-	100	98.165	ENSHCOG00000002423	rab11bb	100	98.165	Hippocampus_comes
ENSXCOG00000009190	-	100	96.789	ENSIPUG00000025100	rab11b	100	96.789	Ictalurus_punctatus
ENSXCOG00000009190	-	100	98.624	ENSIPUG00000019927	rab11bb	100	98.624	Ictalurus_punctatus
ENSXCOG00000009190	-	100	97.706	ENSKMAG00000009033	rab11bb	100	97.706	Kryptolebias_marmoratus
ENSXCOG00000009190	-	100	100.000	ENSKMAG00000006170	-	100	100.000	Kryptolebias_marmoratus
ENSXCOG00000009190	-	100	91.743	ENSLBEG00000005981	-	100	91.743	Labrus_bergylta
ENSXCOG00000009190	-	100	99.083	ENSLBEG00000004172	-	100	99.083	Labrus_bergylta
ENSXCOG00000009190	-	100	97.706	ENSLBEG00000015248	rab11bb	100	97.706	Labrus_bergylta
ENSXCOG00000009190	-	100	97.706	ENSLACG00000016857	-	100	97.706	Latimeria_chalumnae
ENSXCOG00000009190	-	100	96.789	ENSMFAG00000003654	RAB11B	100	96.789	Macaca_fascicularis
ENSXCOG00000009190	-	100	96.789	ENSMLEG00000030601	-	100	96.789	Mandrillus_leucophaeus
ENSXCOG00000009190	-	100	97.248	ENSMAMG00000006378	rab11bb	100	97.248	Mastacembelus_armatus
ENSXCOG00000009190	-	100	98.624	ENSMAMG00000018533	-	100	98.624	Mastacembelus_armatus
ENSXCOG00000009190	-	100	97.706	ENSMZEG00005003352	rab11bb	100	97.706	Maylandia_zebra
ENSXCOG00000009190	-	100	100.000	ENSMZEG00005010975	-	100	100.000	Maylandia_zebra
ENSXCOG00000009190	-	100	96.789	ENSMICG00000034065	-	100	96.789	Microcebus_murinus
ENSXCOG00000009190	-	94	97.561	ENSMMOG00000007917	rab11bb	100	97.561	Mola_mola
ENSXCOG00000009190	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSXCOG00000009190	-	100	100.000	ENSMMOG00000001250	-	100	100.000	Mola_mola
ENSXCOG00000009190	-	100	97.706	ENSMODG00000003841	-	100	97.706	Monodelphis_domestica
ENSXCOG00000009190	-	100	97.706	ENSMALG00000022187	rab11bb	100	97.706	Monopterus_albus
ENSXCOG00000009190	-	94	88.889	ENSMLUG00000006677	-	100	88.889	Myotis_lucifugus
ENSXCOG00000009190	-	100	97.706	ENSNBRG00000000372	rab11bb	100	97.706	Neolamprologus_brichardi
ENSXCOG00000009190	-	100	100.000	ENSNBRG00000023885	-	100	100.000	Neolamprologus_brichardi
ENSXCOG00000009190	-	100	97.706	ENSMEUG00000003686	-	100	97.706	Notamacropus_eugenii
ENSXCOG00000009190	-	100	100.000	ENSONIG00000002544	-	100	100.000	Oreochromis_niloticus
ENSXCOG00000009190	-	100	97.706	ENSONIG00000010435	rab11bb	100	97.706	Oreochromis_niloticus
ENSXCOG00000009190	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSXCOG00000009190	-	99	98.157	ENSORLG00000015284	-	72	98.157	Oryzias_latipes
ENSXCOG00000009190	-	100	97.248	ENSORLG00000013938	rab11bb	100	97.248	Oryzias_latipes
ENSXCOG00000009190	-	100	97.248	ENSORLG00020019393	rab11bb	100	97.248	Oryzias_latipes_hni
ENSXCOG00000009190	-	99	98.157	ENSORLG00020020844	RAB11B	99	98.157	Oryzias_latipes_hni
ENSXCOG00000009190	-	100	97.248	ENSORLG00015020173	rab11bb	100	97.248	Oryzias_latipes_hsok
ENSXCOG00000009190	-	99	98.157	ENSORLG00015016999	RAB11B	99	98.157	Oryzias_latipes_hsok
ENSXCOG00000009190	-	100	99.083	ENSOMEG00000002562	-	100	99.083	Oryzias_melastigma
ENSXCOG00000009190	-	100	97.706	ENSOMEG00000017806	-	100	97.706	Oryzias_melastigma
ENSXCOG00000009190	-	100	96.789	ENSPPAG00000028589	-	100	96.789	Pan_paniscus
ENSXCOG00000009190	-	100	96.789	ENSPTRG00000010422	RAB11B	100	96.789	Pan_troglodytes
ENSXCOG00000009190	-	100	96.789	ENSPANG00000007765	-	100	96.789	Papio_anubis
ENSXCOG00000009190	-	100	97.706	ENSPKIG00000011640	rab11bb	100	97.706	Paramormyrops_kingsleyae
ENSXCOG00000009190	-	98	97.196	ENSPKIG00000001389	-	69	97.196	Paramormyrops_kingsleyae
ENSXCOG00000009190	-	100	97.248	ENSPKIG00000011703	-	100	97.248	Paramormyrops_kingsleyae
ENSXCOG00000009190	-	98	93.607	ENSPSIG00000010242	-	85	93.607	Pelodiscus_sinensis
ENSXCOG00000009190	-	100	97.706	ENSPMGG00000009435	rab11bb	100	97.706	Periophthalmus_magnuspinnatus
ENSXCOG00000009190	-	100	98.165	ENSPMGG00000014333	-	100	98.165	Periophthalmus_magnuspinnatus
ENSXCOG00000009190	-	99	94.470	ENSPMGG00000014336	-	99	94.470	Periophthalmus_magnuspinnatus
ENSXCOG00000009190	-	97	97.170	ENSPCIG00000020371	-	99	97.170	Phascolarctos_cinereus
ENSXCOG00000009190	-	100	100.000	ENSPFOG00000006224	-	100	100.000	Poecilia_formosa
ENSXCOG00000009190	-	100	97.706	ENSPFOG00000024114	-	100	97.706	Poecilia_formosa
ENSXCOG00000009190	-	100	97.706	ENSPLAG00000001598	rab11bb	100	97.706	Poecilia_latipinna
ENSXCOG00000009190	-	100	100.000	ENSPLAG00000014207	-	100	100.000	Poecilia_latipinna
ENSXCOG00000009190	-	100	100.000	ENSPMEG00000007842	-	100	100.000	Poecilia_mexicana
ENSXCOG00000009190	-	100	97.706	ENSPMEG00000012389	rab11bb	100	97.706	Poecilia_mexicana
ENSXCOG00000009190	-	100	97.706	ENSPREG00000014269	rab11bb	100	97.706	Poecilia_reticulata
ENSXCOG00000009190	-	100	99.541	ENSPREG00000006336	-	100	99.541	Poecilia_reticulata
ENSXCOG00000009190	-	100	97.706	ENSPNYG00000004098	rab11bb	100	97.706	Pundamilia_nyererei
ENSXCOG00000009190	-	100	100.000	ENSPNYG00000019611	-	100	100.000	Pundamilia_nyererei
ENSXCOG00000009190	-	100	96.789	ENSRROG00000037812	-	100	96.789	Rhinopithecus_roxellana
ENSXCOG00000009190	-	97	96.698	ENSSHAG00000006816	-	97	96.698	Sarcophilus_harrisii
ENSXCOG00000009190	-	100	97.248	ENSSFOG00015009042	rab11bb	100	97.248	Scleropages_formosus
ENSXCOG00000009190	-	100	73.853	ENSSFOG00015006245	-	100	73.853	Scleropages_formosus
ENSXCOG00000009190	-	100	97.248	ENSSMAG00000004922	rab11bb	100	97.248	Scophthalmus_maximus
ENSXCOG00000009190	-	100	96.330	ENSSMAG00000018613	-	100	96.330	Scophthalmus_maximus
ENSXCOG00000009190	-	100	100.000	ENSSDUG00000002934	-	100	100.000	Seriola_dumerili
ENSXCOG00000009190	-	100	97.706	ENSSDUG00000013558	rab11bb	100	97.706	Seriola_dumerili
ENSXCOG00000009190	-	100	97.706	ENSSLDG00000020676	rab11bb	100	97.706	Seriola_lalandi_dorsalis
ENSXCOG00000009190	-	100	100.000	ENSSLDG00000005275	-	100	100.000	Seriola_lalandi_dorsalis
ENSXCOG00000009190	-	100	97.706	ENSSPUG00000002243	-	100	97.706	Sphenodon_punctatus
ENSXCOG00000009190	-	100	100.000	ENSSPAG00000014559	-	100	100.000	Stegastes_partitus
ENSXCOG00000009190	-	100	97.706	ENSSPAG00000011419	rab11bb	100	97.706	Stegastes_partitus
ENSXCOG00000009190	-	100	97.706	ENSTGUG00000000084	-	100	97.706	Taeniopygia_guttata
ENSXCOG00000009190	-	100	97.706	ENSTRUG00000022029	rab11bb	100	97.706	Takifugu_rubripes
ENSXCOG00000009190	-	99	99.537	ENSTRUG00000021619	-	100	99.537	Takifugu_rubripes
ENSXCOG00000009190	-	99	95.853	ENSTRUG00000021614	-	99	95.853	Takifugu_rubripes
ENSXCOG00000009190	-	100	96.789	ENSTNIG00000011081	rab11bb	100	96.789	Tetraodon_nigroviridis
ENSXCOG00000009190	-	93	97.044	ENSTNIG00000002003	-	100	97.044	Tetraodon_nigroviridis
ENSXCOG00000009190	-	99	99.537	ENSTNIG00000013182	-	100	99.537	Tetraodon_nigroviridis
ENSXCOG00000009190	-	99	95.392	ENSTNIG00000013184	-	99	95.392	Tetraodon_nigroviridis
ENSXCOG00000009190	-	94	97.561	ENSUAMG00000006639	-	99	97.561	Ursus_americanus
ENSXCOG00000009190	-	100	96.804	ENSXETG00000025484	rab11b.1	99	96.804	Xenopus_tropicalis
ENSXCOG00000009190	-	100	97.706	ENSXMAG00000011926	rab11bb	100	97.706	Xiphophorus_maculatus
ENSXCOG00000009190	-	100	99.541	ENSXMAG00000024840	-	100	99.541	Xiphophorus_maculatus