EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000009197 (Gene tree)
Gene ID: -
Gene Symbol: polr2eb
Alias: fk97g10|polr2e|wu:fk97g10|zgc:101098
Full Name: polymerase (RNA) II (DNA directed) polypeptide E%2C b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 2613 bases
Position: chrKQ557224.1:8879694-8882306
Accession: ZDB-GENE-040801-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012157	RNA_pol_Rpb5_N	PF03871.14	5.1e-35	1	1
ENSXCOP00000012157	RNA_pol_Rpb5_C	PF01191.19	1.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012297	-	552	-	ENSXCOP00000012157	183 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009197	polr2eb	100	94.536	ENSG00000099817	POLR2E	99	94.536	Homo_sapiens
ENSXCOG00000009197	polr2eb	100	99.454	ENSAPOG00000002935	polr2eb	100	99.454	Acanthochromis_polyacanthus
ENSXCOG00000009197	polr2eb	100	83.333	ENSAMEG00000003159	POLR2E	100	83.333	Ailuropoda_melanoleuca
ENSXCOG00000009197	polr2eb	100	100.000	ENSACIG00000024371	polr2eb	100	100.000	Amphilophus_citrinellus
ENSXCOG00000009197	polr2eb	100	99.454	ENSAOCG00000018166	polr2eb	100	99.454	Amphiprion_ocellaris
ENSXCOG00000009197	polr2eb	100	86.667	ENSAPEG00000009000	polr2eb	100	86.667	Amphiprion_percula
ENSXCOG00000009197	polr2eb	100	99.454	ENSATEG00000023760	polr2eb	100	99.454	Anabas_testudineus
ENSXCOG00000009197	polr2eb	100	95.082	ENSANAG00000038488	POLR2E	99	95.082	Aotus_nancymaae
ENSXCOG00000009197	polr2eb	100	100.000	ENSACLG00000005254	polr2eb	100	100.000	Astatotilapia_calliptera
ENSXCOG00000009197	polr2eb	100	86.190	ENSAMXG00000018915	POLR2E	100	86.190	Astyanax_mexicanus
ENSXCOG00000009197	polr2eb	100	83.333	ENSBTAG00000020776	POLR2E	100	83.333	Bos_taurus
ENSXCOG00000009197	polr2eb	99	70.192	WBGene00019246	rpb-5	99	70.192	Caenorhabditis_elegans
ENSXCOG00000009197	polr2eb	62	71.429	ENSCJAG00000007666	-	77	71.429	Callithrix_jacchus
ENSXCOG00000009197	polr2eb	100	80.476	ENSCAFG00000019546	POLR2E	100	80.476	Canis_familiaris
ENSXCOG00000009197	polr2eb	100	83.333	ENSCAFG00020017111	POLR2E	100	83.333	Canis_lupus_dingo
ENSXCOG00000009197	polr2eb	100	83.333	ENSCHIG00000014151	POLR2E	100	83.333	Capra_hircus
ENSXCOG00000009197	polr2eb	100	75.410	ENSTSYG00000026377	POLR2E	100	75.410	Carlito_syrichta
ENSXCOG00000009197	polr2eb	90	81.771	ENSCAPG00000010843	POLR2E	93	81.771	Cavia_aperea
ENSXCOG00000009197	polr2eb	100	83.333	ENSCPOG00000001542	POLR2E	100	83.333	Cavia_porcellus
ENSXCOG00000009197	polr2eb	100	95.082	ENSCCAG00000025658	POLR2E	99	95.082	Cebus_capucinus
ENSXCOG00000009197	polr2eb	100	95.082	ENSCATG00000008926	POLR2E	99	95.082	Cercocebus_atys
ENSXCOG00000009197	polr2eb	100	82.857	ENSCLAG00000014874	-	100	82.857	Chinchilla_lanigera
ENSXCOG00000009197	polr2eb	97	61.463	ENSCLAG00000009238	-	100	61.463	Chinchilla_lanigera
ENSXCOG00000009197	polr2eb	100	83.333	ENSCSAG00000012336	POLR2E	100	83.333	Chlorocebus_sabaeus
ENSXCOG00000009197	polr2eb	100	83.810	ENSCPBG00000009702	POLR2E	100	83.810	Chrysemys_picta_bellii
ENSXCOG00000009197	polr2eb	100	74.762	ENSCING00000024933	-	99	74.762	Ciona_intestinalis
ENSXCOG00000009197	polr2eb	100	95.082	ENSCANG00000025560	POLR2E	99	95.082	Colobus_angolensis_palliatus
ENSXCOG00000009197	polr2eb	100	83.810	ENSCGRG00001022927	Polr2e	100	83.810	Cricetulus_griseus_chok1gshd
ENSXCOG00000009197	polr2eb	100	77.674	ENSCGRG00000016441	Polr2e	100	77.674	Cricetulus_griseus_crigri
ENSXCOG00000009197	polr2eb	100	98.361	ENSCSEG00000007107	polr2eb	100	98.361	Cynoglossus_semilaevis
ENSXCOG00000009197	polr2eb	100	99.454	ENSCVAG00000019940	polr2eb	100	99.454	Cyprinodon_variegatus
ENSXCOG00000009197	polr2eb	100	85.714	ENSDARG00000026183	polr2eb	100	85.714	Danio_rerio
ENSXCOG00000009197	polr2eb	89	81.579	ENSDNOG00000044994	POLR2E	84	81.579	Dasypus_novemcinctus
ENSXCOG00000009197	polr2eb	100	83.333	ENSDORG00000001154	Polr2e	100	83.333	Dipodomys_ordii
ENSXCOG00000009197	polr2eb	99	74.163	FBgn0033571	Rpb5	99	74.163	Drosophila_melanogaster
ENSXCOG00000009197	polr2eb	71	75.796	ENSEBUG00000010159	-	76	75.796	Eptatretus_burgeri
ENSXCOG00000009197	polr2eb	64	70.345	ENSEASG00005021615	POLR2E	67	66.667	Equus_asinus_asinus
ENSXCOG00000009197	polr2eb	100	95.628	ENSECAG00000011124	POLR2E	100	95.628	Equus_caballus
ENSXCOG00000009197	polr2eb	100	97.268	ENSELUG00000005815	POLR2E	100	97.268	Esox_lucius
ENSXCOG00000009197	polr2eb	100	96.175	ENSELUG00000020646	polr2e	100	96.175	Esox_lucius
ENSXCOG00000009197	polr2eb	99	95.604	ENSFCAG00000007318	POLR2E	100	95.604	Felis_catus
ENSXCOG00000009197	polr2eb	90	82.292	ENSFALG00000013986	POLR2E	99	82.292	Ficedula_albicollis
ENSXCOG00000009197	polr2eb	100	83.333	ENSFDAG00000014539	POLR2E	100	83.333	Fukomys_damarensis
ENSXCOG00000009197	polr2eb	100	99.454	ENSFHEG00000022398	polr2eb	100	99.454	Fundulus_heteroclitus
ENSXCOG00000009197	polr2eb	100	85.238	ENSGMOG00000007615	polr2eb	100	85.238	Gadus_morhua
ENSXCOG00000009197	polr2eb	100	83.810	ENSGALG00000002591	POLR2E	100	83.810	Gallus_gallus
ENSXCOG00000009197	polr2eb	100	100.000	ENSGAFG00000005087	polr2eb	100	100.000	Gambusia_affinis
ENSXCOG00000009197	polr2eb	100	85.238	ENSGACG00000013247	polr2eb	100	85.238	Gasterosteus_aculeatus
ENSXCOG00000009197	polr2eb	100	83.810	ENSGAGG00000008356	POLR2E	100	83.810	Gopherus_agassizii
ENSXCOG00000009197	polr2eb	100	95.082	ENSGGOG00000011267	POLR2E	99	95.082	Gorilla_gorilla
ENSXCOG00000009197	polr2eb	63	93.913	ENSHBUG00000011099	polr2eb	100	93.913	Haplochromis_burtoni
ENSXCOG00000009197	polr2eb	100	83.333	ENSHGLG00000013330	POLR2E	100	83.333	Heterocephalus_glaber_female
ENSXCOG00000009197	polr2eb	100	83.333	ENSHGLG00100011014	POLR2E	100	83.333	Heterocephalus_glaber_male
ENSXCOG00000009197	polr2eb	50	86.316	ENSHCOG00000012099	-	75	86.316	Hippocampus_comes
ENSXCOG00000009197	polr2eb	100	97.814	ENSHCOG00000000906	polr2eb	100	97.814	Hippocampus_comes
ENSXCOG00000009197	polr2eb	100	86.667	ENSIPUG00000019801	polr2e	100	86.667	Ictalurus_punctatus
ENSXCOG00000009197	polr2eb	100	83.333	ENSSTOG00000002853	POLR2E	100	83.333	Ictidomys_tridecemlineatus
ENSXCOG00000009197	polr2eb	100	83.810	ENSJJAG00000016595	-	100	83.810	Jaculus_jaculus
ENSXCOG00000009197	polr2eb	73	70.199	ENSJJAG00000015812	-	100	70.199	Jaculus_jaculus
ENSXCOG00000009197	polr2eb	100	89.617	ENSJJAG00000003145	-	100	89.617	Jaculus_jaculus
ENSXCOG00000009197	polr2eb	100	86.667	ENSKMAG00000005954	polr2eb	100	86.667	Kryptolebias_marmoratus
ENSXCOG00000009197	polr2eb	100	99.454	ENSLBEG00000024802	polr2eb	100	99.454	Labrus_bergylta
ENSXCOG00000009197	polr2eb	100	84.286	ENSLACG00000013686	POLR2E	100	84.286	Latimeria_chalumnae
ENSXCOG00000009197	polr2eb	74	83.333	ENSLOCG00000004599	POLR2E	100	83.333	Lepisosteus_oculatus
ENSXCOG00000009197	polr2eb	100	64.151	ENSLAFG00000025587	POLR2E	100	64.151	Loxodonta_africana
ENSXCOG00000009197	polr2eb	100	95.082	ENSMFAG00000002884	POLR2E	99	95.082	Macaca_fascicularis
ENSXCOG00000009197	polr2eb	100	95.082	ENSMMUG00000013927	POLR2E	99	95.082	Macaca_mulatta
ENSXCOG00000009197	polr2eb	100	52.133	ENSMNEG00000033452	-	100	52.133	Macaca_nemestrina
ENSXCOG00000009197	polr2eb	100	95.082	ENSMNEG00000034046	-	99	95.082	Macaca_nemestrina
ENSXCOG00000009197	polr2eb	91	75.904	ENSMLEG00000012405	POLR2E	93	75.904	Mandrillus_leucophaeus
ENSXCOG00000009197	polr2eb	100	99.454	ENSMAMG00000018703	polr2eb	100	99.454	Mastacembelus_armatus
ENSXCOG00000009197	polr2eb	100	100.000	ENSMZEG00005010796	polr2eb	100	100.000	Maylandia_zebra
ENSXCOG00000009197	polr2eb	100	82.938	ENSMGAG00000003769	POLR2E	100	82.938	Meleagris_gallopavo
ENSXCOG00000009197	polr2eb	91	81.865	ENSMAUG00000010125	-	100	82.199	Mesocricetus_auratus
ENSXCOG00000009197	polr2eb	100	53.810	ENSMAUG00000011003	-	100	53.810	Mesocricetus_auratus
ENSXCOG00000009197	polr2eb	100	95.628	ENSMICG00000013063	POLR2E	99	95.628	Microcebus_murinus
ENSXCOG00000009197	polr2eb	100	83.810	ENSMOCG00000013414	Polr2e	100	83.810	Microtus_ochrogaster
ENSXCOG00000009197	polr2eb	100	97.268	ENSMMOG00000001161	polr2eb	100	97.268	Mola_mola
ENSXCOG00000009197	polr2eb	90	74.869	ENSMMOG00000001167	polr2eb	88	74.869	Mola_mola
ENSXCOG00000009197	polr2eb	100	83.810	ENSMODG00000005494	POLR2E	100	83.810	Monodelphis_domestica
ENSXCOG00000009197	polr2eb	100	86.667	ENSMALG00000021888	polr2eb	100	86.667	Monopterus_albus
ENSXCOG00000009197	polr2eb	100	83.810	MGP_CAROLIEiJ_G0015561	Polr2e	100	83.810	Mus_caroli
ENSXCOG00000009197	polr2eb	100	83.810	ENSMUSG00000004667	Polr2e	100	83.810	Mus_musculus
ENSXCOG00000009197	polr2eb	100	83.810	MGP_PahariEiJ_G0030974	Polr2e	100	83.810	Mus_pahari
ENSXCOG00000009197	polr2eb	100	83.810	MGP_SPRETEiJ_G0016379	Polr2e	100	83.810	Mus_spretus
ENSXCOG00000009197	polr2eb	100	82.857	ENSMPUG00000008953	POLR2E	100	82.857	Mustela_putorius_furo
ENSXCOG00000009197	polr2eb	100	83.333	ENSMLUG00000013193	POLR2E	100	83.333	Myotis_lucifugus
ENSXCOG00000009197	polr2eb	67	84.252	ENSMLUG00000006376	-	78	84.252	Myotis_lucifugus
ENSXCOG00000009197	polr2eb	100	83.810	ENSNGAG00000001147	Polr2e	100	83.810	Nannospalax_galili
ENSXCOG00000009197	polr2eb	83	60.335	ENSNGAG00000017344	-	96	60.335	Nannospalax_galili
ENSXCOG00000009197	polr2eb	100	100.000	ENSNBRG00000022772	polr2eb	100	100.000	Neolamprologus_brichardi
ENSXCOG00000009197	polr2eb	100	68.844	ENSNLEG00000031364	-	100	68.844	Nomascus_leucogenys
ENSXCOG00000009197	polr2eb	100	91.304	ENSNLEG00000001207	-	100	91.304	Nomascus_leucogenys
ENSXCOG00000009197	polr2eb	100	72.857	ENSOPRG00000008331	POLR2E	100	72.857	Ochotona_princeps
ENSXCOG00000009197	polr2eb	100	83.333	ENSODEG00000013230	-	100	83.333	Octodon_degus
ENSXCOG00000009197	polr2eb	87	71.505	ENSODEG00000007985	-	100	71.505	Octodon_degus
ENSXCOG00000009197	polr2eb	100	71.354	ENSODEG00000011490	-	100	71.354	Octodon_degus
ENSXCOG00000009197	polr2eb	100	86.667	ENSONIG00000002519	polr2eb	100	86.667	Oreochromis_niloticus
ENSXCOG00000009197	polr2eb	100	100.000	ENSORLG00000015346	polr2eb	100	100.000	Oryzias_latipes
ENSXCOG00000009197	polr2eb	100	100.000	ENSORLG00020020700	polr2e	100	100.000	Oryzias_latipes_hni
ENSXCOG00000009197	polr2eb	100	100.000	ENSORLG00015016842	polr2e	100	100.000	Oryzias_latipes_hsok
ENSXCOG00000009197	polr2eb	100	86.667	ENSOMEG00000002709	polr2eb	100	86.667	Oryzias_melastigma
ENSXCOG00000009197	polr2eb	100	83.333	ENSOGAG00000012311	POLR2E	100	83.333	Otolemur_garnettii
ENSXCOG00000009197	polr2eb	100	83.333	ENSOARG00000010994	POLR2E	100	83.333	Ovis_aries
ENSXCOG00000009197	polr2eb	90	94.512	ENSPPAG00000003145	POLR2E	99	94.512	Pan_paniscus
ENSXCOG00000009197	polr2eb	99	95.604	ENSPPRG00000000777	POLR2E	100	95.604	Panthera_pardus
ENSXCOG00000009197	polr2eb	90	86.061	ENSPTIG00000012237	POLR2E	98	86.061	Panthera_tigris_altaica
ENSXCOG00000009197	polr2eb	100	95.082	ENSPTRG00000010183	POLR2E	99	95.082	Pan_troglodytes
ENSXCOG00000009197	polr2eb	100	95.082	ENSPANG00000018011	POLR2E	99	95.082	Papio_anubis
ENSXCOG00000009197	polr2eb	100	97.814	ENSPKIG00000009607	POLR2E	100	97.814	Paramormyrops_kingsleyae
ENSXCOG00000009197	polr2eb	100	97.814	ENSPKIG00000024123	POLR2E	100	97.814	Paramormyrops_kingsleyae
ENSXCOG00000009197	polr2eb	97	79.512	ENSPSIG00000002870	POLR2E	99	79.512	Pelodiscus_sinensis
ENSXCOG00000009197	polr2eb	100	99.454	ENSPMGG00000014354	polr2eb	100	99.454	Periophthalmus_magnuspinnatus
ENSXCOG00000009197	polr2eb	100	83.810	ENSPEMG00000023261	Polr2e	100	83.810	Peromyscus_maniculatus_bairdii
ENSXCOG00000009197	polr2eb	89	82.011	ENSPCIG00000007312	POLR2E	75	82.011	Phascolarctos_cinereus
ENSXCOG00000009197	polr2eb	100	87.143	ENSPFOG00000005734	polr2eb	100	87.143	Poecilia_formosa
ENSXCOG00000009197	polr2eb	100	100.000	ENSPLAG00000014496	polr2eb	100	100.000	Poecilia_latipinna
ENSXCOG00000009197	polr2eb	100	100.000	ENSPMEG00000008053	polr2eb	100	100.000	Poecilia_mexicana
ENSXCOG00000009197	polr2eb	100	100.000	ENSPREG00000006489	polr2eb	100	100.000	Poecilia_reticulata
ENSXCOG00000009197	polr2eb	100	75.829	ENSPPYG00000009305	POLR2E	100	75.829	Pongo_abelii
ENSXCOG00000009197	polr2eb	100	95.082	ENSPCOG00000014491	POLR2E	98	95.082	Propithecus_coquereli
ENSXCOG00000009197	polr2eb	75	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSXCOG00000009197	polr2eb	89	85.789	ENSPNYG00000019797	polr2eb	96	85.789	Pundamilia_nyererei
ENSXCOG00000009197	polr2eb	100	98.361	ENSPNAG00000026263	POLR2E	100	98.361	Pygocentrus_nattereri
ENSXCOG00000009197	polr2eb	100	83.810	ENSRNOG00000013545	Polr2e	100	83.810	Rattus_norvegicus
ENSXCOG00000009197	polr2eb	100	95.082	ENSRBIG00000028726	-	99	95.082	Rhinopithecus_bieti
ENSXCOG00000009197	polr2eb	100	58.294	ENSRBIG00000027259	-	100	58.294	Rhinopithecus_bieti
ENSXCOG00000009197	polr2eb	100	95.082	ENSRROG00000043763	POLR2E	99	95.082	Rhinopithecus_roxellana
ENSXCOG00000009197	polr2eb	99	40.553	YBR154C	RPB5	98	40.553	Saccharomyces_cerevisiae
ENSXCOG00000009197	polr2eb	100	95.082	ENSSBOG00000027241	POLR2E	99	95.082	Saimiri_boliviensis_boliviensis
ENSXCOG00000009197	polr2eb	100	83.810	ENSSHAG00000010690	POLR2E	100	83.810	Sarcophilus_harrisii
ENSXCOG00000009197	polr2eb	100	99.454	ENSSFOG00015006073	polr2e	100	99.454	Scleropages_formosus
ENSXCOG00000009197	polr2eb	100	90.164	ENSSMAG00000012782	polr2eb	100	90.164	Scophthalmus_maximus
ENSXCOG00000009197	polr2eb	100	99.454	ENSSDUG00000003352	polr2eb	100	99.454	Seriola_dumerili
ENSXCOG00000009197	polr2eb	100	99.454	ENSSLDG00000004965	polr2eb	100	99.454	Seriola_lalandi_dorsalis
ENSXCOG00000009197	polr2eb	100	82.857	ENSSPUG00000006114	POLR2E	100	82.857	Sphenodon_punctatus
ENSXCOG00000009197	polr2eb	100	99.454	ENSSPAG00000017556	polr2eb	100	99.454	Stegastes_partitus
ENSXCOG00000009197	polr2eb	100	83.333	ENSSSCG00000021472	POLR2E	100	83.333	Sus_scrofa
ENSXCOG00000009197	polr2eb	75	85.507	ENSTGUG00000000922	POLR2E	96	85.507	Taeniopygia_guttata
ENSXCOG00000009197	polr2eb	100	99.454	ENSTRUG00000018238	polr2eb	100	99.454	Takifugu_rubripes
ENSXCOG00000009197	polr2eb	100	86.667	ENSTNIG00000013187	polr2eb	100	86.667	Tetraodon_nigroviridis
ENSXCOG00000009197	polr2eb	100	82.857	ENSTTRG00000001484	POLR2E	100	82.857	Tursiops_truncatus
ENSXCOG00000009197	polr2eb	100	95.082	ENSUAMG00000009166	POLR2E	100	95.082	Ursus_americanus
ENSXCOG00000009197	polr2eb	100	83.333	ENSVVUG00000022818	POLR2E	54	83.333	Vulpes_vulpes
ENSXCOG00000009197	polr2eb	100	83.810	ENSXETG00000003291	polr2e	100	83.810	Xenopus_tropicalis
ENSXCOG00000009197	polr2eb	100	100.000	ENSXMAG00000026495	polr2eb	100	100.000	Xiphophorus_maculatus