EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000009361 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 39751 bases
Position: chrKQ557225.1:11990304-12030054
Accession: ZDB-GENE-030131-378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012394	DZF	PF07528.14	3.1e-71	1	1
ENSXCOP00000012394	zf-met	PF12874.7	2.2e-21	1	3
ENSXCOP00000012394	zf-met	PF12874.7	2.2e-21	2	3
ENSXCOP00000012394	zf-met	PF12874.7	2.2e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012544	-	3204	-	ENSXCOP00000012394	1067 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009361	zfr	100	74.291	ENSG00000056097	ZFR	99	75.069	Homo_sapiens
ENSXCOG00000009361	zfr	100	80.037	ENSAPOG00000009740	zfr	99	79.539	Acanthochromis_polyacanthus
ENSXCOG00000009361	zfr	100	74.267	ENSAMEG00000006184	ZFR	99	74.703	Ailuropoda_melanoleuca
ENSXCOG00000009361	zfr	76	86.585	ENSACIG00000015926	zfr	82	86.585	Amphilophus_citrinellus
ENSXCOG00000009361	zfr	100	82.947	ENSAOCG00000013876	zfr	99	83.596	Amphiprion_ocellaris
ENSXCOG00000009361	zfr	100	86.191	ENSAPEG00000024383	zfr	99	86.840	Amphiprion_percula
ENSXCOG00000009361	zfr	100	87.628	ENSATEG00000010271	zfr	99	88.000	Anabas_testudineus
ENSXCOG00000009361	zfr	78	68.831	ENSAPLG00000015627	-	100	68.905	Anas_platyrhynchos
ENSXCOG00000009361	zfr	100	72.610	ENSACAG00000007880	ZFR	99	74.081	Anolis_carolinensis
ENSXCOG00000009361	zfr	100	74.199	ENSANAG00000023333	ZFR	99	74.977	Aotus_nancymaae
ENSXCOG00000009361	zfr	76	86.220	ENSACLG00000016832	zfr	82	86.098	Astatotilapia_calliptera
ENSXCOG00000009361	zfr	98	81.474	ENSAMXG00000019511	zfr	99	82.325	Astyanax_mexicanus
ENSXCOG00000009361	zfr	100	74.359	ENSBTAG00000008414	ZFR	99	74.795	Bos_taurus
ENSXCOG00000009361	zfr	100	74.199	ENSCJAG00000018740	ZFR	99	74.977	Callithrix_jacchus
ENSXCOG00000009361	zfr	100	72.329	ENSCAFG00000018886	ZFR	99	74.351	Canis_familiaris
ENSXCOG00000009361	zfr	100	74.359	ENSCAFG00020016859	-	99	74.795	Canis_lupus_dingo
ENSXCOG00000009361	zfr	100	74.265	ENSCHIG00000007710	ZFR	99	75.160	Capra_hircus
ENSXCOG00000009361	zfr	97	73.365	ENSTSYG00000010670	ZFR	98	74.381	Carlito_syrichta
ENSXCOG00000009361	zfr	96	60.443	ENSCAPG00000015655	ZFR	99	58.534	Cavia_aperea
ENSXCOG00000009361	zfr	89	79.558	ENSCPOG00000000862	ZFR	99	68.995	Cavia_porcellus
ENSXCOG00000009361	zfr	100	74.199	ENSCCAG00000024473	ZFR	99	74.977	Cebus_capucinus
ENSXCOG00000009361	zfr	100	74.291	ENSCATG00000038311	ZFR	99	75.069	Cercocebus_atys
ENSXCOG00000009361	zfr	97	73.314	ENSCLAG00000007408	ZFR	99	73.810	Chinchilla_lanigera
ENSXCOG00000009361	zfr	100	74.197	ENSCSAG00000017180	ZFR	99	75.069	Chlorocebus_sabaeus
ENSXCOG00000009361	zfr	89	65.746	ENSCHOG00000003848	ZFR	94	64.722	Choloepus_hoffmanni
ENSXCOG00000009361	zfr	100	74.977	ENSCPBG00000024211	ZFR	99	75.297	Chrysemys_picta_bellii
ENSXCOG00000009361	zfr	100	74.382	ENSCANG00000017807	ZFR	99	75.161	Colobus_angolensis_palliatus
ENSXCOG00000009361	zfr	100	74.291	ENSCGRG00001016009	Zfr	99	75.091	Cricetulus_griseus_chok1gshd
ENSXCOG00000009361	zfr	98	73.327	ENSCGRG00000001228	Zfr	98	73.778	Cricetulus_griseus_crigri
ENSXCOG00000009361	zfr	76	83.010	ENSCSEG00000009224	zfr	100	77.644	Cynoglossus_semilaevis
ENSXCOG00000009361	zfr	100	82.682	ENSCSEG00000011169	ZFR	99	83.799	Cynoglossus_semilaevis
ENSXCOG00000009361	zfr	98	89.619	ENSCVAG00000016494	zfr	100	90.286	Cyprinodon_variegatus
ENSXCOG00000009361	zfr	99	80.556	ENSDARG00000027109	zfr	99	81.019	Danio_rerio
ENSXCOG00000009361	zfr	100	74.335	ENSDNOG00000008852	ZFR	99	75.229	Dasypus_novemcinctus
ENSXCOG00000009361	zfr	100	74.173	ENSDORG00000016643	Zfr	99	75.160	Dipodomys_ordii
ENSXCOG00000009361	zfr	100	70.756	ENSETEG00000008937	ZFR	99	71.442	Echinops_telfairi
ENSXCOG00000009361	zfr	51	59.532	ENSEBUG00000012503	-	97	59.107	Eptatretus_burgeri
ENSXCOG00000009361	zfr	100	74.267	ENSEASG00005007104	ZFR	99	74.703	Equus_asinus_asinus
ENSXCOG00000009361	zfr	82	72.049	ENSECAG00000012851	ZFR	99	72.364	Equus_caballus
ENSXCOG00000009361	zfr	94	66.019	ENSEEUG00000014206	ZFR	82	75.730	Erinaceus_europaeus
ENSXCOG00000009361	zfr	100	70.174	ENSELUG00000022743	zfr	99	71.455	Esox_lucius
ENSXCOG00000009361	zfr	100	74.359	ENSFCAG00000000354	ZFR	99	74.795	Felis_catus
ENSXCOG00000009361	zfr	100	74.537	ENSFALG00000002149	ZFR	99	74.885	Ficedula_albicollis
ENSXCOG00000009361	zfr	99	73.889	ENSFDAG00000012993	ZFR	99	74.468	Fukomys_damarensis
ENSXCOG00000009361	zfr	61	84.025	ENSFHEG00000012064	zfr	100	84.025	Fundulus_heteroclitus
ENSXCOG00000009361	zfr	95	93.243	ENSGMOG00000003967	zfr	93	91.935	Gadus_morhua
ENSXCOG00000009361	zfr	100	75.808	ENSGALG00000003235	-	99	75.872	Gallus_gallus
ENSXCOG00000009361	zfr	100	75.207	ENSGALG00000034488	-	99	74.656	Gallus_gallus
ENSXCOG00000009361	zfr	83	100.000	ENSGAFG00000016229	zfr	96	100.000	Gambusia_affinis
ENSXCOG00000009361	zfr	99	80.952	ENSGACG00000005045	zfr	99	81.654	Gasterosteus_aculeatus
ENSXCOG00000009361	zfr	95	74.416	ENSGAGG00000013544	ZFR	99	74.759	Gopherus_agassizii
ENSXCOG00000009361	zfr	100	74.382	ENSGGOG00000016302	ZFR	99	74.977	Gorilla_gorilla
ENSXCOG00000009361	zfr	100	74.013	ENSHGLG00000008088	ZFR	99	74.793	Heterocephalus_glaber_female
ENSXCOG00000009361	zfr	96	73.634	ENSHGLG00100016776	ZFR	98	74.352	Heterocephalus_glaber_male
ENSXCOG00000009361	zfr	100	82.163	ENSHCOG00000001548	zfr	99	83.272	Hippocampus_comes
ENSXCOG00000009361	zfr	100	80.702	ENSIPUG00000008192	zfr	99	82.087	Ictalurus_punctatus
ENSXCOG00000009361	zfr	100	74.238	ENSSTOG00000008742	ZFR	99	74.587	Ictidomys_tridecemlineatus
ENSXCOG00000009361	zfr	99	69.577	ENSJJAG00000023064	Zfr	98	70.141	Jaculus_jaculus
ENSXCOG00000009361	zfr	91	85.976	ENSKMAG00000009468	zfr	99	87.602	Kryptolebias_marmoratus
ENSXCOG00000009361	zfr	100	83.318	ENSLBEG00000010783	zfr	99	83.241	Labrus_bergylta
ENSXCOG00000009361	zfr	100	73.137	ENSLACG00000000831	ZFR	99	73.505	Latimeria_chalumnae
ENSXCOG00000009361	zfr	100	78.610	ENSLOCG00000006727	zfr	99	79.513	Lepisosteus_oculatus
ENSXCOG00000009361	zfr	98	73.763	ENSLAFG00000002308	ZFR	99	74.556	Loxodonta_africana
ENSXCOG00000009361	zfr	100	73.376	ENSMFAG00000042691	ZFR	99	74.149	Macaca_fascicularis
ENSXCOG00000009361	zfr	100	74.291	ENSMMUG00000001317	ZFR	99	75.069	Macaca_mulatta
ENSXCOG00000009361	zfr	100	74.291	ENSMNEG00000029441	ZFR	99	75.069	Macaca_nemestrina
ENSXCOG00000009361	zfr	100	72.018	ENSMLEG00000028503	ZFR	99	74.617	Mandrillus_leucophaeus
ENSXCOG00000009361	zfr	100	86.047	ENSMAMG00000017351	zfr	99	85.674	Mastacembelus_armatus
ENSXCOG00000009361	zfr	76	86.220	ENSMZEG00005021243	zfr	82	86.098	Maylandia_zebra
ENSXCOG00000009361	zfr	96	63.785	ENSMGAG00000002841	ZFR	99	63.238	Meleagris_gallopavo
ENSXCOG00000009361	zfr	100	74.840	ENSMAUG00000000976	Zfr	99	74.818	Mesocricetus_auratus
ENSXCOG00000009361	zfr	100	74.149	ENSMICG00000001244	ZFR	99	74.635	Microcebus_murinus
ENSXCOG00000009361	zfr	100	74.793	ENSMOCG00000018630	Zfr	99	74.931	Microtus_ochrogaster
ENSXCOG00000009361	zfr	100	80.037	ENSMMOG00000012585	zfr	90	83.280	Mola_mola
ENSXCOG00000009361	zfr	100	74.793	ENSMODG00000020412	ZFR	99	75.414	Monodelphis_domestica
ENSXCOG00000009361	zfr	100	81.767	ENSMALG00000007123	zfr	99	81.581	Monopterus_albus
ENSXCOG00000009361	zfr	100	74.291	MGP_CAROLIEiJ_G0019681	Zfr	100	77.852	Mus_caroli
ENSXCOG00000009361	zfr	100	74.657	ENSMUSG00000022201	Zfr	100	77.401	Mus_musculus
ENSXCOG00000009361	zfr	100	74.291	MGP_PahariEiJ_G0016057	Zfr	100	77.852	Mus_pahari
ENSXCOG00000009361	zfr	100	74.564	MGP_SPRETEiJ_G0020574	Zfr	100	77.852	Mus_spretus
ENSXCOG00000009361	zfr	73	71.925	ENSMPUG00000015193	-	99	71.906	Mustela_putorius_furo
ENSXCOG00000009361	zfr	97	73.880	ENSMLUG00000011797	ZFR	99	74.833	Myotis_lucifugus
ENSXCOG00000009361	zfr	100	74.474	ENSNGAG00000018328	Zfr	99	74.977	Nannospalax_galili
ENSXCOG00000009361	zfr	76	82.360	ENSNBRG00000008378	zfr	82	82.360	Neolamprologus_brichardi
ENSXCOG00000009361	zfr	100	71.717	ENSNLEG00000014098	ZFR	99	74.521	Nomascus_leucogenys
ENSXCOG00000009361	zfr	96	69.319	ENSMEUG00000010225	ZFR	99	69.866	Notamacropus_eugenii
ENSXCOG00000009361	zfr	83	83.936	ENSOPRG00000016756	ZFR	84	83.936	Ochotona_princeps
ENSXCOG00000009361	zfr	96	73.730	ENSODEG00000001990	ZFR	99	74.448	Octodon_degus
ENSXCOG00000009361	zfr	100	64.051	ENSONIG00000013960	zfr	78	83.933	Oreochromis_niloticus
ENSXCOG00000009361	zfr	96	74.809	ENSOANG00000014434	ZFR	99	75.000	Ornithorhynchus_anatinus
ENSXCOG00000009361	zfr	100	74.197	ENSOCUG00000016737	ZFR	99	75.000	Oryctolagus_cuniculus
ENSXCOG00000009361	zfr	100	84.279	ENSORLG00000017243	zfr	99	84.372	Oryzias_latipes
ENSXCOG00000009361	zfr	100	84.279	ENSORLG00020014823	zfr	99	84.372	Oryzias_latipes_hni
ENSXCOG00000009361	zfr	100	84.000	ENSORLG00015005801	zfr	99	84.093	Oryzias_latipes_hsok
ENSXCOG00000009361	zfr	100	84.480	ENSOMEG00000003336	zfr	99	84.572	Oryzias_melastigma
ENSXCOG00000009361	zfr	100	72.344	ENSOGAG00000015117	ZFR	99	72.744	Otolemur_garnettii
ENSXCOG00000009361	zfr	97	74.113	ENSOARG00000012233	ZFR	99	74.568	Ovis_aries
ENSXCOG00000009361	zfr	97	73.415	ENSPPAG00000027447	ZFR	99	74.497	Pan_paniscus
ENSXCOG00000009361	zfr	100	74.359	ENSPPRG00000008253	ZFR	99	74.795	Panthera_pardus
ENSXCOG00000009361	zfr	100	71.978	ENSPTIG00000010038	ZFR	99	72.635	Panthera_tigris_altaica
ENSXCOG00000009361	zfr	100	74.291	ENSPTRG00000016771	ZFR	99	75.069	Pan_troglodytes
ENSXCOG00000009361	zfr	100	73.137	ENSPANG00000003729	ZFR	99	73.821	Papio_anubis
ENSXCOG00000009361	zfr	100	80.129	ENSPKIG00000016781	ZFR	99	79.463	Paramormyrops_kingsleyae
ENSXCOG00000009361	zfr	99	72.777	ENSPKIG00000007596	ZFR	99	73.236	Paramormyrops_kingsleyae
ENSXCOG00000009361	zfr	51	80.769	ENSPSIG00000005779	ZFR	98	81.502	Pelodiscus_sinensis
ENSXCOG00000009361	zfr	100	69.655	ENSPMGG00000015984	zfr	99	70.401	Periophthalmus_magnuspinnatus
ENSXCOG00000009361	zfr	96	72.865	ENSPEMG00000014573	Zfr	98	73.699	Peromyscus_maniculatus_bairdii
ENSXCOG00000009361	zfr	100	74.816	ENSPCIG00000020906	ZFR	99	75.437	Phascolarctos_cinereus
ENSXCOG00000009361	zfr	100	97.661	ENSPFOG00000005931	zfr	100	97.661	Poecilia_formosa
ENSXCOG00000009361	zfr	100	97.103	ENSPREG00000011947	zfr	100	97.103	Poecilia_reticulata
ENSXCOG00000009361	zfr	97	73.524	ENSPPYG00000015378	ZFR	99	74.234	Pongo_abelii
ENSXCOG00000009361	zfr	100	67.860	ENSPCAG00000007277	ZFR	99	67.792	Procavia_capensis
ENSXCOG00000009361	zfr	95	73.481	ENSPCOG00000000045	ZFR	99	74.088	Propithecus_coquereli
ENSXCOG00000009361	zfr	94	83.030	ENSPVAG00000004780	ZFR	94	83.030	Pteropus_vampyrus
ENSXCOG00000009361	zfr	76	86.220	ENSPNYG00000006239	zfr	82	86.098	Pundamilia_nyererei
ENSXCOG00000009361	zfr	100	81.256	ENSPNAG00000025151	zfr	99	82.364	Pygocentrus_nattereri
ENSXCOG00000009361	zfr	100	74.291	ENSRNOG00000011627	Zfr	99	82.812	Rattus_norvegicus
ENSXCOG00000009361	zfr	100	74.382	ENSRBIG00000041561	ZFR	99	75.161	Rhinopithecus_bieti
ENSXCOG00000009361	zfr	100	74.382	ENSRROG00000044008	ZFR	99	75.161	Rhinopithecus_roxellana
ENSXCOG00000009361	zfr	96	73.826	ENSSBOG00000024150	ZFR	99	74.640	Saimiri_boliviensis_boliviensis
ENSXCOG00000009361	zfr	96	74.521	ENSSHAG00000015478	ZFR	99	75.072	Sarcophilus_harrisii
ENSXCOG00000009361	zfr	100	74.146	ENSSFOG00015017300	ZFR	99	74.331	Scleropages_formosus
ENSXCOG00000009361	zfr	100	84.389	ENSSMAG00000000320	zfr	99	85.399	Scophthalmus_maximus
ENSXCOG00000009361	zfr	100	87.454	ENSSDUG00000013882	zfr	99	87.918	Seriola_dumerili
ENSXCOG00000009361	zfr	76	87.226	ENSSLDG00000000762	zfr	82	87.226	Seriola_lalandi_dorsalis
ENSXCOG00000009361	zfr	90	85.586	ENSSARG00000006571	ZFR	92	85.586	Sorex_araneus
ENSXCOG00000009361	zfr	96	75.000	ENSSPUG00000016786	ZFR	99	74.452	Sphenodon_punctatus
ENSXCOG00000009361	zfr	100	86.642	ENSSPAG00000019293	zfr	99	87.570	Stegastes_partitus
ENSXCOG00000009361	zfr	100	74.173	ENSSSCG00000027681	ZFR	99	74.499	Sus_scrofa
ENSXCOG00000009361	zfr	99	74.517	ENSTGUG00000001909	ZFR	99	74.517	Taeniopygia_guttata
ENSXCOG00000009361	zfr	100	84.123	ENSTRUG00000016620	zfr	99	84.401	Takifugu_rubripes
ENSXCOG00000009361	zfr	56	80.034	ENSTNIG00000018856	zfr	99	78.405	Tetraodon_nigroviridis
ENSXCOG00000009361	zfr	95	72.069	ENSTBEG00000017687	ZFR	95	71.809	Tupaia_belangeri
ENSXCOG00000009361	zfr	100	70.238	ENSTTRG00000017321	ZFR	99	70.594	Tursiops_truncatus
ENSXCOG00000009361	zfr	78	71.462	ENSUAMG00000000172	-	99	71.678	Ursus_americanus
ENSXCOG00000009361	zfr	78	71.462	ENSUMAG00000013805	-	99	71.678	Ursus_maritimus
ENSXCOG00000009361	zfr	100	72.161	ENSVPAG00000011011	ZFR	99	72.511	Vicugna_pacos
ENSXCOG00000009361	zfr	100	74.359	ENSVVUG00000022171	-	99	74.795	Vulpes_vulpes
ENSXCOG00000009361	zfr	100	69.359	ENSXETG00000015598	zfr	99	70.381	Xenopus_tropicalis
ENSXCOG00000009361	zfr	100	99.719	ENSXMAG00000013356	zfr	100	99.719	Xiphophorus_maculatus