EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000009422 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 1679 bases
Position: chrKQ557211.1:7519397-7521075
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012463	RRM_1	PF00076.22	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012614	-	303	-	ENSXCOP00000012463	100 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000009422	slirp	83	31.507	ENSXCOG00000003397	hnrnpaba	58	31.507
ENSXCOG00000009422	slirp	83	32.877	ENSXCOG00000018775	-	57	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009422	slirp	85	56.471	ENSG00000119705	SLIRP	92	61.429	Homo_sapiens
ENSXCOG00000009422	slirp	100	77.000	ENSAPOG00000001298	slirp	100	77.000	Acanthochromis_polyacanthus
ENSXCOG00000009422	slirp	68	55.882	ENSAMEG00000003975	SLIRP	75	55.882	Ailuropoda_melanoleuca
ENSXCOG00000009422	slirp	98	74.490	ENSACIG00000023083	slirp	97	74.490	Amphilophus_citrinellus
ENSXCOG00000009422	slirp	98	74.490	ENSAOCG00000006342	slirp	99	74.490	Amphiprion_ocellaris
ENSXCOG00000009422	slirp	97	74.227	ENSAPEG00000015719	-	99	74.227	Amphiprion_percula
ENSXCOG00000009422	slirp	98	74.490	ENSAPEG00000015917	slirp	99	74.490	Amphiprion_percula
ENSXCOG00000009422	slirp	100	68.000	ENSATEG00000013525	slirp	100	68.000	Anabas_testudineus
ENSXCOG00000009422	slirp	88	64.773	ENSAMXG00000018693	slirp	88	64.773	Astyanax_mexicanus
ENSXCOG00000009422	slirp	88	54.545	ENSCJAG00000016946	SLIRP	81	54.545	Callithrix_jacchus
ENSXCOG00000009422	slirp	91	51.613	ENSCAFG00020015876	-	84	51.613	Canis_lupus_dingo
ENSXCOG00000009422	slirp	88	52.273	ENSCCAG00000030130	SLIRP	81	52.273	Cebus_capucinus
ENSXCOG00000009422	slirp	76	60.526	ENSCATG00000036327	SLIRP	74	63.768	Cercocebus_atys
ENSXCOG00000009422	slirp	88	53.409	ENSCSAG00000011736	SLIRP	81	53.409	Chlorocebus_sabaeus
ENSXCOG00000009422	slirp	79	56.962	ENSCPBG00000026327	SLIRP	80	56.962	Chrysemys_picta_bellii
ENSXCOG00000009422	slirp	69	62.319	ENSCANG00000032892	SLIRP	70	62.319	Colobus_angolensis_palliatus
ENSXCOG00000009422	slirp	99	48.039	ENSCGRG00001024068	Slirp	92	48.039	Cricetulus_griseus_chok1gshd
ENSXCOG00000009422	slirp	99	48.039	ENSCGRG00000017440	Slirp	92	48.039	Cricetulus_griseus_crigri
ENSXCOG00000009422	slirp	84	60.714	ENSCSEG00000015766	slirp	86	60.714	Cynoglossus_semilaevis
ENSXCOG00000009422	slirp	90	80.000	ENSCVAG00000012504	slirp	86	80.000	Cyprinodon_variegatus
ENSXCOG00000009422	slirp	91	72.527	ENSDARG00000097753	slirp	91	72.340	Danio_rerio
ENSXCOG00000009422	slirp	88	47.191	ENSDNOG00000007721	SLIRP	81	47.191	Dasypus_novemcinctus
ENSXCOG00000009422	slirp	89	45.556	ENSDORG00000012379	Slirp	81	45.556	Dipodomys_ordii
ENSXCOG00000009422	slirp	89	51.685	ENSETEG00000010345	SLIRP	81	51.685	Echinops_telfairi
ENSXCOG00000009422	slirp	85	52.326	ENSEASG00005020193	SLIRP	77	52.326	Equus_asinus_asinus
ENSXCOG00000009422	slirp	98	49.495	ENSEEUG00000007257	SLIRP	98	49.495	Erinaceus_europaeus
ENSXCOG00000009422	slirp	96	68.750	ENSELUG00000016800	slirp	95	68.750	Esox_lucius
ENSXCOG00000009422	slirp	71	54.930	ENSFCAG00000036326	SLIRP	72	54.930	Felis_catus
ENSXCOG00000009422	slirp	78	57.692	ENSFALG00000012583	SLIRP	83	53.409	Ficedula_albicollis
ENSXCOG00000009422	slirp	85	47.674	ENSFDAG00000008347	SLIRP	76	47.674	Fukomys_damarensis
ENSXCOG00000009422	slirp	78	83.333	ENSFHEG00000004709	slirp	85	83.333	Fundulus_heteroclitus
ENSXCOG00000009422	slirp	97	68.041	ENSGMOG00000016948	slirp	93	68.041	Gadus_morhua
ENSXCOG00000009422	slirp	88	54.545	ENSGALG00000031238	SLIRP	85	54.545	Gallus_gallus
ENSXCOG00000009422	slirp	100	92.000	ENSGAFG00000010998	slirp	100	92.000	Gambusia_affinis
ENSXCOG00000009422	slirp	82	79.268	ENSGACG00000020137	slirp	95	79.268	Gasterosteus_aculeatus
ENSXCOG00000009422	slirp	98	56.566	ENSGAGG00000009953	SLIRP	68	56.566	Gopherus_agassizii
ENSXCOG00000009422	slirp	85	56.471	ENSGGOG00000011059	-	75	61.429	Gorilla_gorilla
ENSXCOG00000009422	slirp	88	45.556	ENSHGLG00000018491	SLIRP	81	45.556	Heterocephalus_glaber_female
ENSXCOG00000009422	slirp	88	45.556	ENSHGLG00100014153	SLIRP	81	45.556	Heterocephalus_glaber_male
ENSXCOG00000009422	slirp	96	77.083	ENSHCOG00000006795	slirp	97	77.083	Hippocampus_comes
ENSXCOG00000009422	slirp	98	71.429	ENSIPUG00000010214	SLIRP	98	71.429	Ictalurus_punctatus
ENSXCOG00000009422	slirp	89	48.352	ENSSTOG00000034316	SLIRP	82	48.352	Ictidomys_tridecemlineatus
ENSXCOG00000009422	slirp	100	68.000	ENSKMAG00000002038	slirp	96	68.000	Kryptolebias_marmoratus
ENSXCOG00000009422	slirp	100	68.000	ENSLBEG00000007564	slirp	100	68.000	Labrus_bergylta
ENSXCOG00000009422	slirp	96	69.792	ENSLACG00000013434	SLIRP	92	69.792	Latimeria_chalumnae
ENSXCOG00000009422	slirp	88	53.409	ENSMFAG00000042960	SLIRP	74	63.768	Macaca_fascicularis
ENSXCOG00000009422	slirp	84	57.143	ENSMMUG00000029256	SLIRP	74	63.768	Macaca_mulatta
ENSXCOG00000009422	slirp	88	53.409	ENSMNEG00000028921	SLIRP	74	63.768	Macaca_nemestrina
ENSXCOG00000009422	slirp	73	60.274	ENSMLEG00000043644	SLIRP	70	63.768	Mandrillus_leucophaeus
ENSXCOG00000009422	slirp	98	78.571	ENSMZEG00005004617	slirp	99	78.571	Maylandia_zebra
ENSXCOG00000009422	slirp	88	50.000	ENSMAUG00000003857	Slirp	81	50.000	Mesocricetus_auratus
ENSXCOG00000009422	slirp	89	52.809	ENSMICG00000012080	SLIRP	79	52.809	Microcebus_murinus
ENSXCOG00000009422	slirp	72	54.167	ENSMOCG00000016019	Slirp	69	52.857	Microtus_ochrogaster
ENSXCOG00000009422	slirp	100	76.000	ENSMMOG00000018268	slirp	100	76.000	Mola_mola
ENSXCOG00000009422	slirp	69	53.623	ENSMODG00000005207	-	97	53.623	Monodelphis_domestica
ENSXCOG00000009422	slirp	98	73.469	ENSMALG00000012581	slirp	100	73.469	Monopterus_albus
ENSXCOG00000009422	slirp	96	47.664	MGP_CAROLIEiJ_G0017995	Slirp	99	47.664	Mus_caroli
ENSXCOG00000009422	slirp	99	47.273	ENSMUSG00000021040	Slirp	98	47.273	Mus_musculus
ENSXCOG00000009422	slirp	99	47.273	MGP_SPRETEiJ_G0018840	Slirp	98	47.273	Mus_spretus
ENSXCOG00000009422	slirp	98	47.000	ENSMLUG00000029544	-	88	47.000	Myotis_lucifugus
ENSXCOG00000009422	slirp	87	48.315	ENSMLUG00000024998	-	88	46.000	Myotis_lucifugus
ENSXCOG00000009422	slirp	85	46.512	ENSNGAG00000016363	Slirp	83	46.512	Nannospalax_galili
ENSXCOG00000009422	slirp	89	49.438	ENSNLEG00000032459	-	75	57.143	Nomascus_leucogenys
ENSXCOG00000009422	slirp	89	49.438	ENSNLEG00000027238	-	79	57.971	Nomascus_leucogenys
ENSXCOG00000009422	slirp	88	54.444	ENSODEG00000012580	SLIRP	76	60.000	Octodon_degus
ENSXCOG00000009422	slirp	98	77.551	ENSONIG00000011692	slirp	99	77.551	Oreochromis_niloticus
ENSXCOG00000009422	slirp	89	52.747	ENSOANG00000022366	SLIRP	82	52.747	Ornithorhynchus_anatinus
ENSXCOG00000009422	slirp	100	77.000	ENSORLG00000010761	slirp	78	77.000	Oryzias_latipes
ENSXCOG00000009422	slirp	100	76.000	ENSORLG00020022188	slirp	100	76.000	Oryzias_latipes_hni
ENSXCOG00000009422	slirp	99	76.768	ENSORLG00015020171	slirp	98	76.768	Oryzias_latipes_hsok
ENSXCOG00000009422	slirp	100	75.000	ENSOMEG00000019321	slirp	100	75.000	Oryzias_melastigma
ENSXCOG00000009422	slirp	85	56.471	ENSPPAG00000040710	-	75	61.429	Pan_paniscus
ENSXCOG00000009422	slirp	70	55.714	ENSPPRG00000014350	SLIRP	71	55.714	Panthera_pardus
ENSXCOG00000009422	slirp	70	55.714	ENSPTIG00000014196	SLIRP	71	55.714	Panthera_tigris_altaica
ENSXCOG00000009422	slirp	85	56.471	ENSPTRG00000030691	SLIRP	75	61.429	Pan_troglodytes
ENSXCOG00000009422	slirp	88	53.409	ENSPANG00000026323	SLIRP	74	63.768	Papio_anubis
ENSXCOG00000009422	slirp	66	69.697	ENSPKIG00000008831	slirp	65	69.697	Paramormyrops_kingsleyae
ENSXCOG00000009422	slirp	79	77.215	ENSPMGG00000010541	slirp	91	77.215	Periophthalmus_magnuspinnatus
ENSXCOG00000009422	slirp	72	54.167	ENSPEMG00000013234	Slirp	69	52.857	Peromyscus_maniculatus_bairdii
ENSXCOG00000009422	slirp	85	52.941	ENSPMAG00000009355	slirp	94	52.941	Petromyzon_marinus
ENSXCOG00000009422	slirp	78	47.436	ENSPCIG00000026842	-	84	47.436	Phascolarctos_cinereus
ENSXCOG00000009422	slirp	99	90.909	ENSPFOG00000006758	slirp	99	90.909	Poecilia_formosa
ENSXCOG00000009422	slirp	99	91.919	ENSPLAG00000011140	slirp	99	91.919	Poecilia_latipinna
ENSXCOG00000009422	slirp	99	90.909	ENSPMEG00000019535	slirp	99	90.909	Poecilia_mexicana
ENSXCOG00000009422	slirp	99	90.909	ENSPREG00000011673	slirp	99	90.909	Poecilia_reticulata
ENSXCOG00000009422	slirp	74	58.108	ENSPPYG00000006030	SLIRP	69	57.333	Pongo_abelii
ENSXCOG00000009422	slirp	89	43.333	ENSPCOG00000015159	SLIRP	64	57.353	Propithecus_coquereli
ENSXCOG00000009422	slirp	98	69.388	ENSPNAG00000008633	slirp	99	69.388	Pygocentrus_nattereri
ENSXCOG00000009422	slirp	88	57.955	ENSRBIG00000032222	-	81	57.955	Rhinopithecus_bieti
ENSXCOG00000009422	slirp	74	55.405	ENSRBIG00000035817	-	68	55.405	Rhinopithecus_bieti
ENSXCOG00000009422	slirp	69	62.319	ENSRBIG00000032998	-	64	62.319	Rhinopithecus_bieti
ENSXCOG00000009422	slirp	65	64.615	ENSRBIG00000031396	-	65	64.615	Rhinopithecus_bieti
ENSXCOG00000009422	slirp	65	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSXCOG00000009422	slirp	67	64.179	ENSRROG00000017133	-	70	64.179	Rhinopithecus_roxellana
ENSXCOG00000009422	slirp	88	57.955	ENSRROG00000036656	-	81	57.955	Rhinopithecus_roxellana
ENSXCOG00000009422	slirp	71	63.380	ENSRROG00000041312	-	70	63.380	Rhinopithecus_roxellana
ENSXCOG00000009422	slirp	70	60.000	ENSSBOG00000020014	SLIRP	74	60.870	Saimiri_boliviensis_boliviensis
ENSXCOG00000009422	slirp	87	66.667	ENSSFOG00015011165	slirp	88	66.667	Scleropages_formosus
ENSXCOG00000009422	slirp	100	52.941	ENSSMAG00000012930	slirp	100	52.941	Scophthalmus_maximus
ENSXCOG00000009422	slirp	100	77.000	ENSSDUG00000021883	slirp	66	77.000	Seriola_dumerili
ENSXCOG00000009422	slirp	100	77.000	ENSSLDG00000023136	slirp	91	77.000	Seriola_lalandi_dorsalis
ENSXCOG00000009422	slirp	91	58.763	ENSSPUG00000009346	SLIRP	99	58.763	Sphenodon_punctatus
ENSXCOG00000009422	slirp	100	66.000	ENSSPAG00000013477	slirp	100	66.000	Stegastes_partitus
ENSXCOG00000009422	slirp	99	46.847	ENSSSCG00000028167	SLIRP	100	46.847	Sus_scrofa
ENSXCOG00000009422	slirp	78	56.410	ENSTGUG00000012337	SLIRP	87	50.000	Taeniopygia_guttata
ENSXCOG00000009422	slirp	98	64.646	ENSTRUG00000020127	slirp	98	64.646	Takifugu_rubripes
ENSXCOG00000009422	slirp	88	53.846	ENSUAMG00000022445	SLIRP	81	53.846	Ursus_americanus
ENSXCOG00000009422	slirp	88	52.747	ENSUMAG00000007166	SLIRP	81	52.747	Ursus_maritimus
ENSXCOG00000009422	slirp	86	48.276	ENSVPAG00000001781	SLIRP	81	48.276	Vicugna_pacos
ENSXCOG00000009422	slirp	89	51.087	ENSVVUG00000004436	SLIRP	82	51.087	Vulpes_vulpes
ENSXCOG00000009422	slirp	81	67.901	ENSXETG00000030343	SLIRP	91	67.901	Xenopus_tropicalis
ENSXCOG00000009422	slirp	100	98.000	ENSXMAG00000015655	slirp	100	98.000	Xiphophorus_maculatus