EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000009445 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 10997 bases
Position: chrKQ557204.1:24973015-24984011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012497	zf-CCHC	PF00098.23	7e-07	1	1
ENSXCOP00000012497	PAP_assoc	PF03828.19	3e-25	1	2
ENSXCOP00000012497	PAP_assoc	PF03828.19	3e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012648	-	3717	-	ENSXCOP00000012497	1238 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000009445	-	53	66.667	ENSXCOG00000007204	-	55	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009445	-	85	64.504	ENSG00000083223	TUT7	85	65.714	Homo_sapiens
ENSXCOG00000009445	-	83	78.822	ENSAPOG00000012979	TUT7	97	79.267	Acanthochromis_polyacanthus
ENSXCOG00000009445	-	83	64.540	ENSAMEG00000004148	TUT7	74	54.802	Ailuropoda_melanoleuca
ENSXCOG00000009445	-	90	71.116	ENSAOCG00000004223	-	99	71.116	Amphiprion_ocellaris
ENSXCOG00000009445	-	94	59.420	ENSAPLG00000015510	TUT7	80	65.478	Anas_platyrhynchos
ENSXCOG00000009445	-	77	53.434	ENSACAG00000000279	TUT7	81	76.152	Anolis_carolinensis
ENSXCOG00000009445	-	91	58.852	ENSANAG00000025848	TUT7	95	55.206	Aotus_nancymaae
ENSXCOG00000009445	-	81	75.541	ENSACLG00000018198	TUT7	96	75.000	Astatotilapia_calliptera
ENSXCOG00000009445	-	91	59.241	ENSBTAG00000001737	TUT7	82	64.353	Bos_taurus
ENSXCOG00000009445	-	91	59.370	ENSCJAG00000001845	TUT7	95	55.206	Callithrix_jacchus
ENSXCOG00000009445	-	92	64.540	ENSCAFG00000001331	TUT7	83	65.103	Canis_familiaris
ENSXCOG00000009445	-	92	64.540	ENSCAFG00020023620	TUT7	86	65.103	Canis_lupus_dingo
ENSXCOG00000009445	-	91	59.406	ENSCHIG00000017690	TUT7	83	64.540	Capra_hircus
ENSXCOG00000009445	-	83	63.551	ENSTSYG00000008907	TUT7	99	54.612	Carlito_syrichta
ENSXCOG00000009445	-	91	57.778	ENSCPOG00000002500	TUT7	65	64.259	Cavia_porcellus
ENSXCOG00000009445	-	91	59.536	ENSCATG00000032888	TUT7	95	54.964	Cercocebus_atys
ENSXCOG00000009445	-	89	59.046	ENSCLAG00000007535	TUT7	71	59.802	Chinchilla_lanigera
ENSXCOG00000009445	-	91	60.033	ENSCSAG00000007408	TUT7	82	64.728	Chlorocebus_sabaeus
ENSXCOG00000009445	-	77	72.751	ENSCHOG00000011129	TUT7	55	72.751	Choloepus_hoffmanni
ENSXCOG00000009445	-	83	67.608	ENSCPBG00000005272	TUT7	62	67.608	Chrysemys_picta_bellii
ENSXCOG00000009445	-	91	59.667	ENSCANG00000035790	TUT7	95	54.964	Colobus_angolensis_palliatus
ENSXCOG00000009445	-	90	60.611	ENSCGRG00001020605	-	70	60.951	Cricetulus_griseus_chok1gshd
ENSXCOG00000009445	-	86	64.098	ENSCGRG00000016585	-	65	64.474	Cricetulus_griseus_crigri
ENSXCOG00000009445	-	81	71.688	ENSCSEG00000007068	TUT7	98	71.130	Cynoglossus_semilaevis
ENSXCOG00000009445	-	83	80.959	ENSCVAG00000012526	-	98	81.686	Cyprinodon_variegatus
ENSXCOG00000009445	-	74	49.062	ENSDARG00000074645	CABZ01032476.1	83	48.930	Danio_rerio
ENSXCOG00000009445	-	92	59.194	ENSDNOG00000010663	TUT7	95	48.332	Dasypus_novemcinctus
ENSXCOG00000009445	-	62	65.318	ENSDORG00000009046	-	92	55.808	Dipodomys_ordii
ENSXCOG00000009445	-	67	71.429	ENSETEG00000007739	TUT7	56	71.429	Echinops_telfairi
ENSXCOG00000009445	-	90	59.512	ENSEASG00005020165	TUT7	65	65.103	Equus_asinus_asinus
ENSXCOG00000009445	-	90	59.512	ENSECAG00000014831	TUT7	65	65.356	Equus_caballus
ENSXCOG00000009445	-	91	47.841	ENSEEUG00000012794	TUT7	67	52.199	Erinaceus_europaeus
ENSXCOG00000009445	-	98	58.599	ENSELUG00000013049	-	98	58.599	Esox_lucius
ENSXCOG00000009445	-	99	60.033	ENSFCAG00000003491	TUT7	95	56.174	Felis_catus
ENSXCOG00000009445	-	99	61.356	ENSFALG00000003541	TUT7	89	55.298	Ficedula_albicollis
ENSXCOG00000009445	-	88	60.067	ENSFDAG00000002315	TUT7	78	60.738	Fukomys_damarensis
ENSXCOG00000009445	-	82	84.593	ENSFHEG00000004770	-	99	84.165	Fundulus_heteroclitus
ENSXCOG00000009445	-	79	74.589	ENSGMOG00000001464	-	90	73.309	Gadus_morhua
ENSXCOG00000009445	-	90	61.356	ENSGALG00000012607	ZCCHC6	79	61.186	Gallus_gallus
ENSXCOG00000009445	-	92	92.127	ENSGAFG00000017141	-	98	92.127	Gambusia_affinis
ENSXCOG00000009445	-	83	73.629	ENSGACG00000004735	TUT7	98	73.442	Gasterosteus_aculeatus
ENSXCOG00000009445	-	86	64.783	ENSGAGG00000013087	TUT7	75	64.498	Gopherus_agassizii
ENSXCOG00000009445	-	91	59.204	ENSGGOG00000007523	ZCCHC6	95	54.722	Gorilla_gorilla
ENSXCOG00000009445	-	84	63.401	ENSHGLG00000018427	TUT7	67	64.140	Heterocephalus_glaber_female
ENSXCOG00000009445	-	84	63.401	ENSHGLG00100004701	TUT7	67	63.956	Heterocephalus_glaber_male
ENSXCOG00000009445	-	91	58.717	ENSSTOG00000000586	TUT7	66	64.165	Ictidomys_tridecemlineatus
ENSXCOG00000009445	-	74	65.957	ENSJJAG00000000106	-	94	55.721	Jaculus_jaculus
ENSXCOG00000009445	-	90	68.522	ENSLBEG00000015545	-	100	68.421	Labrus_bergylta
ENSXCOG00000009445	-	92	61.028	ENSLACG00000001637	TUT7	81	61.360	Latimeria_chalumnae
ENSXCOG00000009445	-	95	60.669	ENSLOCG00000002472	TUT7	85	62.230	Lepisosteus_oculatus
ENSXCOG00000009445	-	70	62.622	ENSLAFG00000007884	TUT7	74	67.329	Loxodonta_africana
ENSXCOG00000009445	-	91	59.536	ENSMFAG00000000971	TUT7	95	54.964	Macaca_fascicularis
ENSXCOG00000009445	-	91	58.920	ENSMMUG00000003401	TUT7	95	54.964	Macaca_mulatta
ENSXCOG00000009445	-	91	59.701	ENSMNEG00000031427	TUT7	95	54.964	Macaca_nemestrina
ENSXCOG00000009445	-	91	59.701	ENSMLEG00000027049	TUT7	95	54.964	Mandrillus_leucophaeus
ENSXCOG00000009445	-	81	77.001	ENSMAMG00000011815	TUT7	99	77.180	Mastacembelus_armatus
ENSXCOG00000009445	-	83	75.269	ENSMZEG00005012809	TUT7	97	74.731	Maylandia_zebra
ENSXCOG00000009445	-	96	49.928	ENSMGAG00000006542	TUT7	79	58.627	Meleagris_gallopavo
ENSXCOG00000009445	-	90	60.307	ENSMAUG00000006963	-	78	64.783	Mesocricetus_auratus
ENSXCOG00000009445	-	74	64.394	ENSMICG00000016944	TUT7	95	55.875	Microcebus_murinus
ENSXCOG00000009445	-	76	60.678	ENSMOCG00000007812	-	95	55.206	Microtus_ochrogaster
ENSXCOG00000009445	-	86	64.540	ENSMODG00000003542	TUT7	77	64.353	Monodelphis_domestica
ENSXCOG00000009445	-	82	75.926	ENSMALG00000000634	TUT7	97	75.641	Monopterus_albus
ENSXCOG00000009445	-	84	63.534	MGP_CAROLIEiJ_G0018612	-	75	64.098	Mus_caroli
ENSXCOG00000009445	-	86	63.415	ENSMUSG00000035248	Tut7	78	63.977	Mus_musculus
ENSXCOG00000009445	-	86	63.858	MGP_PahariEiJ_G0019676	-	80	64.232	Mus_pahari
ENSXCOG00000009445	-	86	63.602	MGP_SPRETEiJ_G0019491	-	78	64.165	Mus_spretus
ENSXCOG00000009445	-	92	59.706	ENSMPUG00000002191	TUT7	70	58.089	Mustela_putorius_furo
ENSXCOG00000009445	-	95	57.014	ENSMLUG00000001298	TUT7	78	65.530	Myotis_lucifugus
ENSXCOG00000009445	-	70	59.319	ENSNGAG00000022758	-	94	55.419	Nannospalax_galili
ENSXCOG00000009445	-	83	76.316	ENSNBRG00000021961	TUT7	99	75.762	Neolamprologus_brichardi
ENSXCOG00000009445	-	92	58.592	ENSNLEG00000005138	TUT7	95	54.722	Nomascus_leucogenys
ENSXCOG00000009445	-	77	52.055	ENSMEUG00000006540	TUT7	70	52.055	Notamacropus_eugenii
ENSXCOG00000009445	-	85	60.038	ENSOPRG00000002893	TUT7	64	53.061	Ochotona_princeps
ENSXCOG00000009445	-	76	57.837	ENSODEG00000006904	-	92	55.721	Octodon_degus
ENSXCOG00000009445	-	84	74.885	ENSONIG00000017001	TUT7	98	75.257	Oreochromis_niloticus
ENSXCOG00000009445	-	85	63.636	ENSOCUG00000010949	TUT7	68	57.231	Oryctolagus_cuniculus
ENSXCOG00000009445	-	82	62.622	ENSORLG00000001714	-	100	62.483	Oryzias_latipes
ENSXCOG00000009445	-	82	67.938	ENSORLG00020007882	-	100	67.797	Oryzias_latipes_hni
ENSXCOG00000009445	-	81	63.925	ENSORLG00015017233	-	99	63.925	Oryzias_latipes_hsok
ENSXCOG00000009445	-	81	66.812	ENSOMEG00000015528	-	92	69.420	Oryzias_melastigma
ENSXCOG00000009445	-	86	63.977	ENSOGAG00000015630	TUT7	79	64.540	Otolemur_garnettii
ENSXCOG00000009445	-	86	63.722	ENSOARG00000008732	TUT7	79	64.286	Ovis_aries
ENSXCOG00000009445	-	91	59.370	ENSPPAG00000038548	TUT7	95	54.722	Pan_paniscus
ENSXCOG00000009445	-	99	59.868	ENSPPRG00000011084	TUT7	95	55.932	Panthera_pardus
ENSXCOG00000009445	-	99	59.868	ENSPTIG00000007881	TUT7	95	55.932	Panthera_tigris_altaica
ENSXCOG00000009445	-	91	59.204	ENSPTRG00000021076	TUT7	95	54.722	Pan_troglodytes
ENSXCOG00000009445	-	91	54.355	ENSPANG00000024890	TUT7	95	54.964	Papio_anubis
ENSXCOG00000009445	-	99	50.579	ENSPKIG00000022326	TUT7	84	65.500	Paramormyrops_kingsleyae
ENSXCOG00000009445	-	85	61.709	ENSPSIG00000003600	TUT7	62	66.226	Pelodiscus_sinensis
ENSXCOG00000009445	-	93	58.199	ENSPEMG00000014030	-	70	63.925	Peromyscus_maniculatus_bairdii
ENSXCOG00000009445	-	85	65.152	ENSPCIG00000018302	TUT7	78	65.152	Phascolarctos_cinereus
ENSXCOG00000009445	-	86	91.674	ENSPFOG00000011606	-	100	91.304	Poecilia_formosa
ENSXCOG00000009445	-	82	97.034	ENSPLAG00000006121	TUT7	99	97.034	Poecilia_latipinna
ENSXCOG00000009445	-	81	89.205	ENSPREG00000009118	TUT7	97	89.205	Poecilia_reticulata
ENSXCOG00000009445	-	91	59.536	ENSPPYG00000019340	TUT7	79	64.728	Pongo_abelii
ENSXCOG00000009445	-	71	61.842	ENSPCAG00000011630	TUT7	57	61.935	Procavia_capensis
ENSXCOG00000009445	-	85	64.394	ENSPCOG00000023407	TUT7	99	54.964	Propithecus_coquereli
ENSXCOG00000009445	-	81	58.776	ENSPVAG00000004589	TUT7	71	64.962	Pteropus_vampyrus
ENSXCOG00000009445	-	82	75.134	ENSPNYG00000004149	TUT7	97	74.731	Pundamilia_nyererei
ENSXCOG00000009445	-	91	58.361	ENSRNOG00000016629	Tut7	79	63.415	Rattus_norvegicus
ENSXCOG00000009445	-	91	54.902	ENSRBIG00000016827	TUT7	95	54.964	Rhinopithecus_bieti
ENSXCOG00000009445	-	91	59.536	ENSRROG00000034432	TUT7	95	54.964	Rhinopithecus_roxellana
ENSXCOG00000009445	-	94	66.224	ENSSHAG00000008290	TUT7	75	66.224	Sarcophilus_harrisii
ENSXCOG00000009445	-	94	65.210	ENSSFOG00015009813	zcchc6	83	66.667	Scleropages_formosus
ENSXCOG00000009445	-	83	77.031	ENSSDUG00000012876	TUT7	99	77.031	Seriola_dumerili
ENSXCOG00000009445	-	69	68.287	ENSSARG00000009763	TUT7	60	68.287	Sorex_araneus
ENSXCOG00000009445	-	97	59.314	ENSSPUG00000004029	TUT7	66	60.465	Sphenodon_punctatus
ENSXCOG00000009445	-	84	72.507	ENSSPAG00000018387	-	97	72.507	Stegastes_partitus
ENSXCOG00000009445	-	87	64.154	ENSSSCG00000010952	TUT7	67	63.472	Sus_scrofa
ENSXCOG00000009445	-	85	64.935	ENSTGUG00000000624	TUT7	78	64.935	Taeniopygia_guttata
ENSXCOG00000009445	-	82	69.808	ENSTNIG00000015951	TUT7	100	68.942	Tetraodon_nigroviridis
ENSXCOG00000009445	-	88	51.613	ENSTBEG00000010446	TUT7	75	55.618	Tupaia_belangeri
ENSXCOG00000009445	-	89	59.802	ENSTTRG00000004236	TUT7	83	57.231	Tursiops_truncatus
ENSXCOG00000009445	-	62	64.410	ENSUAMG00000027094	-	91	64.990	Ursus_americanus
ENSXCOG00000009445	-	83	64.773	ENSUMAG00000004929	TUT7	75	55.667	Ursus_maritimus
ENSXCOG00000009445	-	91	55.795	ENSVPAG00000001946	TUT7	67	56.117	Vicugna_pacos
ENSXCOG00000009445	-	95	64.444	ENSVVUG00000022427	TUT7	71	65.291	Vulpes_vulpes
ENSXCOG00000009445	-	90	60.656	ENSXETG00000017552	tut7	80	60.393	Xenopus_tropicalis