EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000009541 (Gene tree)
Gene ID: -
Gene Symbol: rab34a
Alias: rab34|zgc:101620
Full Name: RAB34%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4253 bases
Position: chrKQ557210.1:4376159-4380411
Accession: ZDB-GENE-041010-197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012620	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012772	-	780	-	ENSXCOP00000012620	259 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000009541	rab34a	80	31.944	ENSXCOG00000009190	-	94	31.944
ENSXCOG00000009541	rab34a	62	38.272	ENSXCOG00000010770	-	63	38.272
ENSXCOG00000009541	rab34a	79	34.450	ENSXCOG00000009094	rab9b	96	34.450
ENSXCOG00000009541	rab34a	60	35.256	ENSXCOG00000008042	-	70	35.256
ENSXCOG00000009541	rab34a	67	33.333	ENSXCOG00000008410	si:dkey-34d22.5	78	33.333
ENSXCOG00000009541	rab34a	62	33.125	ENSXCOG00000016452	rab22a	81	33.125
ENSXCOG00000009541	rab34a	62	33.750	ENSXCOG00000020121	rab5aa	73	33.750
ENSXCOG00000009541	rab34a	61	35.000	ENSXCOG00000020125	rab25a	80	37.500
ENSXCOG00000009541	rab34a	79	34.286	ENSXCOG00000010695	zgc:171927	95	34.286
ENSXCOG00000009541	rab34a	62	38.509	ENSXCOG00000006259	rab6a	76	38.509
ENSXCOG00000009541	rab34a	64	37.427	ENSXCOG00000013344	rab33a	59	38.323
ENSXCOG00000009541	rab34a	80	31.455	ENSXCOG00000001357	rab11a	77	31.455
ENSXCOG00000009541	rab34a	60	38.854	ENSXCOG00000006807	rab39bb	73	38.854
ENSXCOG00000009541	rab34a	62	36.646	ENSXCOG00000015802	RAB41	75	36.646
ENSXCOG00000009541	rab34a	74	33.505	ENSXCOG00000004227	rab25b	94	32.381
ENSXCOG00000009541	rab34a	80	31.797	ENSXCOG00000004226	rab11al	94	31.797
ENSXCOG00000009541	rab34a	70	35.450	ENSXCOG00000011864	rab23	81	37.500
ENSXCOG00000009541	rab34a	62	32.298	ENSXCOG00000006300	-	70	32.298
ENSXCOG00000009541	rab34a	56	31.724	ENSXCOG00000007650	rras	78	33.333
ENSXCOG00000009541	rab34a	66	32.571	ENSXCOG00000019921	rab7a	84	32.571
ENSXCOG00000009541	rab34a	62	38.272	ENSXCOG00000013842	rab1ab	77	38.272
ENSXCOG00000009541	rab34a	62	33.125	ENSXCOG00000016788	rab5c	73	33.125
ENSXCOG00000009541	rab34a	63	34.756	ENSXCOG00000019310	rab12	66	34.756
ENSXCOG00000009541	rab34a	62	38.750	ENSXCOG00000002232	rab6bb	75	38.750
ENSXCOG00000009541	rab34a	53	44.366	ENSXCOG00000018683	zgc:101559	60	44.366
ENSXCOG00000009541	rab34a	66	32.370	ENSXCOG00000003428	rab42a	78	32.370
ENSXCOG00000009541	rab34a	62	38.750	ENSXCOG00000019533	rab13	84	38.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009541	rab34a	99	75.969	ENSG00000109113	RAB34	100	77.852	Homo_sapiens
ENSXCOG00000009541	rab34a	100	89.189	ENSAPOG00000003165	rab34a	97	89.189	Acanthochromis_polyacanthus
ENSXCOG00000009541	rab34a	99	77.132	ENSAMEG00000004697	RAB34	82	77.132	Ailuropoda_melanoleuca
ENSXCOG00000009541	rab34a	86	82.960	ENSACIG00000008620	rab34a	100	82.960	Amphilophus_citrinellus
ENSXCOG00000009541	rab34a	100	89.961	ENSAOCG00000018544	rab34a	97	89.961	Amphiprion_ocellaris
ENSXCOG00000009541	rab34a	100	90.347	ENSAPEG00000010503	rab34a	97	90.347	Amphiprion_percula
ENSXCOG00000009541	rab34a	100	88.462	ENSATEG00000023047	rab34a	97	88.462	Anabas_testudineus
ENSXCOG00000009541	rab34a	99	77.132	ENSANAG00000023861	RAB34	99	77.132	Aotus_nancymaae
ENSXCOG00000009541	rab34a	100	88.462	ENSACLG00000005093	rab34a	97	88.462	Astatotilapia_calliptera
ENSXCOG00000009541	rab34a	100	81.853	ENSAMXG00000043003	rab34a	100	81.853	Astyanax_mexicanus
ENSXCOG00000009541	rab34a	95	77.328	ENSBTAG00000046129	RAB34	99	69.580	Bos_taurus
ENSXCOG00000009541	rab34a	99	76.744	ENSCJAG00000013101	RAB34	99	76.744	Callithrix_jacchus
ENSXCOG00000009541	rab34a	99	75.969	ENSCAFG00000018780	RAB34	99	75.969	Canis_familiaris
ENSXCOG00000009541	rab34a	99	75.969	ENSCAFG00020011740	RAB34	99	75.969	Canis_lupus_dingo
ENSXCOG00000009541	rab34a	99	77.132	ENSCHIG00000014703	RAB34	99	77.132	Capra_hircus
ENSXCOG00000009541	rab34a	99	77.132	ENSTSYG00000030891	RAB34	99	77.132	Carlito_syrichta
ENSXCOG00000009541	rab34a	92	78.661	ENSCAPG00000008237	RAB34	99	78.661	Cavia_aperea
ENSXCOG00000009541	rab34a	99	77.132	ENSCPOG00000001449	RAB34	99	77.132	Cavia_porcellus
ENSXCOG00000009541	rab34a	99	77.132	ENSCCAG00000034632	RAB34	99	77.132	Cebus_capucinus
ENSXCOG00000009541	rab34a	99	76.744	ENSCLAG00000009672	RAB34	99	76.744	Chinchilla_lanigera
ENSXCOG00000009541	rab34a	99	75.194	ENSCSAG00000007143	RAB34	99	75.194	Chlorocebus_sabaeus
ENSXCOG00000009541	rab34a	99	74.806	ENSCHOG00000009871	RAB34	99	74.806	Choloepus_hoffmanni
ENSXCOG00000009541	rab34a	100	76.448	ENSCPBG00000020275	RAB34	99	76.448	Chrysemys_picta_bellii
ENSXCOG00000009541	rab34a	99	75.581	ENSCANG00000033566	RAB34	99	75.581	Colobus_angolensis_palliatus
ENSXCOG00000009541	rab34a	99	77.132	ENSCGRG00001000893	Rab34	99	77.132	Cricetulus_griseus_chok1gshd
ENSXCOG00000009541	rab34a	99	77.132	ENSCGRG00000017588	Rab34	99	77.132	Cricetulus_griseus_crigri
ENSXCOG00000009541	rab34a	100	86.100	ENSCSEG00000012961	rab34a	100	86.100	Cynoglossus_semilaevis
ENSXCOG00000009541	rab34a	100	92.278	ENSCVAG00000018191	rab34a	97	92.278	Cyprinodon_variegatus
ENSXCOG00000009541	rab34a	100	79.231	ENSDARG00000045628	rab34a	100	80.913	Danio_rerio
ENSXCOG00000009541	rab34a	99	75.969	ENSDNOG00000019485	RAB34	99	75.969	Dasypus_novemcinctus
ENSXCOG00000009541	rab34a	99	77.132	ENSDORG00000011452	Rab34	99	77.132	Dipodomys_ordii
ENSXCOG00000009541	rab34a	100	76.448	ENSEASG00005009898	RAB34	100	76.448	Equus_asinus_asinus
ENSXCOG00000009541	rab34a	100	76.154	ENSECAG00000007212	RAB34	100	76.154	Equus_caballus
ENSXCOG00000009541	rab34a	59	82.237	ENSEEUG00000004731	RAB34	100	82.237	Erinaceus_europaeus
ENSXCOG00000009541	rab34a	99	82.946	ENSELUG00000022157	rab34a	98	82.946	Esox_lucius
ENSXCOG00000009541	rab34a	99	77.519	ENSFCAG00000003937	RAB34	99	77.519	Felis_catus
ENSXCOG00000009541	rab34a	99	77.132	ENSFDAG00000016178	RAB34	99	77.132	Fukomys_damarensis
ENSXCOG00000009541	rab34a	100	93.050	ENSFHEG00000013691	rab34a	100	93.050	Fundulus_heteroclitus
ENSXCOG00000009541	rab34a	100	80.695	ENSGMOG00000016238	rab34a	97	80.695	Gadus_morhua
ENSXCOG00000009541	rab34a	100	75.290	ENSGALG00000026315	RAB34	100	75.290	Gallus_gallus
ENSXCOG00000009541	rab34a	100	96.139	ENSGAFG00000012579	rab34a	97	96.139	Gambusia_affinis
ENSXCOG00000009541	rab34a	100	86.486	ENSGACG00000011190	rab34a	97	86.486	Gasterosteus_aculeatus
ENSXCOG00000009541	rab34a	83	77.103	ENSGAGG00000012473	RAB34	91	77.103	Gopherus_agassizii
ENSXCOG00000009541	rab34a	99	75.969	ENSGGOG00000016726	RAB34	99	75.969	Gorilla_gorilla
ENSXCOG00000009541	rab34a	100	88.803	ENSHBUG00000016064	rab34a	97	88.803	Haplochromis_burtoni
ENSXCOG00000009541	rab34a	100	76.062	ENSHGLG00000008023	RAB34	100	76.062	Heterocephalus_glaber_female
ENSXCOG00000009541	rab34a	100	76.062	ENSHGLG00100017982	RAB34	100	76.062	Heterocephalus_glaber_male
ENSXCOG00000009541	rab34a	100	81.467	ENSHCOG00000020527	rab34a	97	81.467	Hippocampus_comes
ENSXCOG00000009541	rab34a	100	79.151	ENSIPUG00000017447	rab34a	100	79.151	Ictalurus_punctatus
ENSXCOG00000009541	rab34a	99	76.744	ENSSTOG00000025062	RAB34	99	76.744	Ictidomys_tridecemlineatus
ENSXCOG00000009541	rab34a	99	78.295	ENSJJAG00000010285	Rab34	99	78.295	Jaculus_jaculus
ENSXCOG00000009541	rab34a	100	88.031	ENSKMAG00000019647	rab34a	97	88.031	Kryptolebias_marmoratus
ENSXCOG00000009541	rab34a	100	88.803	ENSLBEG00000026006	rab34a	97	88.803	Labrus_bergylta
ENSXCOG00000009541	rab34a	100	76.062	ENSLACG00000001081	RAB34	100	76.062	Latimeria_chalumnae
ENSXCOG00000009541	rab34a	100	83.012	ENSLOCG00000005802	rab34a	97	83.012	Lepisosteus_oculatus
ENSXCOG00000009541	rab34a	100	76.062	ENSLAFG00000013385	RAB34	100	76.062	Loxodonta_africana
ENSXCOG00000009541	rab34a	99	75.581	ENSMFAG00000045768	RAB34	99	75.581	Macaca_fascicularis
ENSXCOG00000009541	rab34a	99	75.581	ENSMMUG00000007293	RAB34	99	75.581	Macaca_mulatta
ENSXCOG00000009541	rab34a	99	75.676	ENSMNEG00000030368	RAB34	99	75.676	Macaca_nemestrina
ENSXCOG00000009541	rab34a	86	75.336	ENSMLEG00000034269	RAB34	99	75.336	Mandrillus_leucophaeus
ENSXCOG00000009541	rab34a	100	91.538	ENSMAMG00000018672	rab34a	97	91.538	Mastacembelus_armatus
ENSXCOG00000009541	rab34a	100	88.803	ENSMZEG00005008306	rab34a	97	88.803	Maylandia_zebra
ENSXCOG00000009541	rab34a	99	76.744	ENSMAUG00000017730	Rab34	99	76.744	Mesocricetus_auratus
ENSXCOG00000009541	rab34a	99	77.606	ENSMICG00000016913	RAB34	99	77.606	Microcebus_murinus
ENSXCOG00000009541	rab34a	99	76.744	ENSMOCG00000016580	Rab34	99	76.744	Microtus_ochrogaster
ENSXCOG00000009541	rab34a	100	79.389	ENSMMOG00000014400	rab34a	100	79.389	Mola_mola
ENSXCOG00000009541	rab34a	93	67.355	ENSMODG00000019295	RAB34	91	67.355	Monodelphis_domestica
ENSXCOG00000009541	rab34a	100	86.873	ENSMALG00000016715	rab34a	97	86.873	Monopterus_albus
ENSXCOG00000009541	rab34a	99	77.132	MGP_CAROLIEiJ_G0016794	Rab34	99	77.132	Mus_caroli
ENSXCOG00000009541	rab34a	99	76.744	ENSMUSG00000002059	Rab34	99	76.744	Mus_musculus
ENSXCOG00000009541	rab34a	99	76.744	MGP_PahariEiJ_G0017931	Rab34	99	76.744	Mus_pahari
ENSXCOG00000009541	rab34a	99	76.744	MGP_SPRETEiJ_G0017637	Rab34	99	76.744	Mus_spretus
ENSXCOG00000009541	rab34a	99	76.357	ENSMPUG00000014191	RAB34	99	76.357	Mustela_putorius_furo
ENSXCOG00000009541	rab34a	81	79.904	ENSMLUG00000012440	RAB34	99	79.904	Myotis_lucifugus
ENSXCOG00000009541	rab34a	99	76.744	ENSNGAG00000002744	Rab34	99	76.744	Nannospalax_galili
ENSXCOG00000009541	rab34a	100	89.231	ENSNBRG00000019750	rab34a	100	89.231	Neolamprologus_brichardi
ENSXCOG00000009541	rab34a	99	75.969	ENSNLEG00000002777	RAB34	99	75.969	Nomascus_leucogenys
ENSXCOG00000009541	rab34a	93	76.250	ENSMEUG00000009450	RAB34	99	76.250	Notamacropus_eugenii
ENSXCOG00000009541	rab34a	99	76.357	ENSOPRG00000012602	RAB34	99	76.357	Ochotona_princeps
ENSXCOG00000009541	rab34a	99	75.969	ENSODEG00000012270	RAB34	99	75.969	Octodon_degus
ENSXCOG00000009541	rab34a	100	88.803	ENSONIG00000013175	rab34a	97	88.803	Oreochromis_niloticus
ENSXCOG00000009541	rab34a	100	61.686	ENSOANG00000000147	RAB34	100	61.686	Ornithorhynchus_anatinus
ENSXCOG00000009541	rab34a	99	77.519	ENSOCUG00000023006	RAB34	82	77.519	Oryctolagus_cuniculus
ENSXCOG00000009541	rab34a	100	88.803	ENSORLG00000004394	rab34a	97	88.803	Oryzias_latipes
ENSXCOG00000009541	rab34a	100	88.803	ENSORLG00020010041	rab34a	97	88.803	Oryzias_latipes_hni
ENSXCOG00000009541	rab34a	100	89.189	ENSORLG00015014829	rab34a	97	89.189	Oryzias_latipes_hsok
ENSXCOG00000009541	rab34a	95	91.057	ENSOMEG00000003647	rab34a	81	91.057	Oryzias_melastigma
ENSXCOG00000009541	rab34a	99	76.744	ENSOARG00000003396	RAB34	95	76.744	Ovis_aries
ENSXCOG00000009541	rab34a	99	75.969	ENSPPAG00000037180	RAB34	99	75.969	Pan_paniscus
ENSXCOG00000009541	rab34a	99	77.519	ENSPPRG00000001286	RAB34	99	77.519	Panthera_pardus
ENSXCOG00000009541	rab34a	99	77.519	ENSPTIG00000021241	RAB34	99	77.519	Panthera_tigris_altaica
ENSXCOG00000009541	rab34a	99	75.969	ENSPTRG00000008931	RAB34	99	75.969	Pan_troglodytes
ENSXCOG00000009541	rab34a	99	75.581	ENSPANG00000023435	RAB34	99	75.581	Papio_anubis
ENSXCOG00000009541	rab34a	100	78.764	ENSPKIG00000006695	rab34a	100	78.764	Paramormyrops_kingsleyae
ENSXCOG00000009541	rab34a	100	85.714	ENSPMGG00000004027	rab34a	100	85.714	Periophthalmus_magnuspinnatus
ENSXCOG00000009541	rab34a	99	77.132	ENSPEMG00000015055	Rab34	99	77.132	Peromyscus_maniculatus_bairdii
ENSXCOG00000009541	rab34a	100	75.676	ENSPCIG00000017945	-	65	75.676	Phascolarctos_cinereus
ENSXCOG00000009541	rab34a	100	95.367	ENSPFOG00000008547	rab34a	83	95.367	Poecilia_formosa
ENSXCOG00000009541	rab34a	100	95.753	ENSPLAG00000022991	rab34a	92	95.753	Poecilia_latipinna
ENSXCOG00000009541	rab34a	100	95.753	ENSPMEG00000002086	rab34a	97	95.753	Poecilia_mexicana
ENSXCOG00000009541	rab34a	79	97.073	ENSPREG00000008951	rab34a	83	97.073	Poecilia_reticulata
ENSXCOG00000009541	rab34a	99	73.256	ENSPPYG00000008107	-	99	73.256	Pongo_abelii
ENSXCOG00000009541	rab34a	99	74.806	ENSPCAG00000016994	RAB34	99	74.806	Procavia_capensis
ENSXCOG00000009541	rab34a	99	77.907	ENSPCOG00000021648	RAB34	99	77.907	Propithecus_coquereli
ENSXCOG00000009541	rab34a	99	75.969	ENSPVAG00000002921	RAB34	99	75.969	Pteropus_vampyrus
ENSXCOG00000009541	rab34a	100	88.077	ENSPNYG00000017514	rab34a	100	88.077	Pundamilia_nyererei
ENSXCOG00000009541	rab34a	100	84.556	ENSPNAG00000003179	rab34a	100	84.556	Pygocentrus_nattereri
ENSXCOG00000009541	rab34a	99	76.744	ENSRNOG00000023375	Rab34	99	76.744	Rattus_norvegicus
ENSXCOG00000009541	rab34a	99	74.806	ENSRBIG00000038841	RAB34	99	74.806	Rhinopithecus_bieti
ENSXCOG00000009541	rab34a	99	74.806	ENSRROG00000004951	RAB34	99	74.806	Rhinopithecus_roxellana
ENSXCOG00000009541	rab34a	99	74.031	ENSSBOG00000029883	RAB34	99	74.031	Saimiri_boliviensis_boliviensis
ENSXCOG00000009541	rab34a	98	77.165	ENSSHAG00000014522	RAB34	77	77.165	Sarcophilus_harrisii
ENSXCOG00000009541	rab34a	100	81.853	ENSSFOG00015004325	rab34a	100	81.853	Scleropages_formosus
ENSXCOG00000009541	rab34a	100	90.385	ENSSMAG00000004343	rab34a	97	90.385	Scophthalmus_maximus
ENSXCOG00000009541	rab34a	100	90.347	ENSSDUG00000010942	rab34a	97	90.347	Seriola_dumerili
ENSXCOG00000009541	rab34a	100	90.347	ENSSLDG00000009573	rab34a	97	90.347	Seriola_lalandi_dorsalis
ENSXCOG00000009541	rab34a	100	89.961	ENSSPAG00000017348	rab34a	97	89.961	Stegastes_partitus
ENSXCOG00000009541	rab34a	99	77.132	ENSSSCG00000017769	RAB34	99	77.132	Sus_scrofa
ENSXCOG00000009541	rab34a	78	80.976	ENSTRUG00000005937	rab34a	91	80.976	Takifugu_rubripes
ENSXCOG00000009541	rab34a	100	68.321	ENSTRUG00000010393	-	100	68.321	Takifugu_rubripes
ENSXCOG00000009541	rab34a	100	84.942	ENSTNIG00000016231	rab34a	100	84.942	Tetraodon_nigroviridis
ENSXCOG00000009541	rab34a	99	77.519	ENSTBEG00000005193	RAB34	99	77.519	Tupaia_belangeri
ENSXCOG00000009541	rab34a	99	76.357	ENSTTRG00000004102	RAB34	99	76.357	Tursiops_truncatus
ENSXCOG00000009541	rab34a	99	76.744	ENSUAMG00000005003	RAB34	99	76.744	Ursus_americanus
ENSXCOG00000009541	rab34a	92	78.243	ENSUMAG00000011766	-	63	78.243	Ursus_maritimus
ENSXCOG00000009541	rab34a	99	75.969	ENSVVUG00000017083	RAB34	99	75.969	Vulpes_vulpes
ENSXCOG00000009541	rab34a	100	75.676	ENSXETG00000019257	rab34	100	75.676	Xenopus_tropicalis
ENSXCOG00000009541	rab34a	100	99.228	ENSXMAG00000026496	rab34a	97	99.228	Xiphophorus_maculatus