EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000009547 (Gene tree)
Gene ID: -
Gene Symbol: secisbp2
Alias: im:7147048|si:ch211-261c8.1
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 8043 bases
Position: chrKQ557204.1:26125549-26133591
Accession: ZDB-GENE-050208-263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012630	Ribosomal_L7Ae	PF01248.26	2.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000012782	-	1455	-	ENSXCOP00000012630	484 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009547	secisbp2	64	45.070	ENSG00000138593	SECISBP2L	56	44.538	Homo_sapiens
ENSXCOG00000009547	secisbp2	86	69.797	ENSAPOG00000005939	secisbp2	68	62.128	Acanthochromis_polyacanthus
ENSXCOG00000009547	secisbp2	88	56.476	ENSACIG00000024185	secisbp2	87	58.936	Amphilophus_citrinellus
ENSXCOG00000009547	secisbp2	88	68.395	ENSAOCG00000019052	secisbp2	72	68.395	Amphiprion_ocellaris
ENSXCOG00000009547	secisbp2	88	68.395	ENSAPEG00000012971	secisbp2	73	68.395	Amphiprion_percula
ENSXCOG00000009547	secisbp2	86	67.259	ENSATEG00000001095	secisbp2	58	67.259	Anabas_testudineus
ENSXCOG00000009547	secisbp2	88	58.491	ENSACLG00000019976	secisbp2	67	58.491	Astatotilapia_calliptera
ENSXCOG00000009547	secisbp2	64	64.507	ENSAMXG00000015953	secisbp2	50	60.101	Astyanax_mexicanus
ENSXCOG00000009547	secisbp2	74	51.750	ENSBTAG00000001939	SECISBP2	54	51.750	Bos_taurus
ENSXCOG00000009547	secisbp2	64	47.727	ENSCAPG00000008522	SECISBP2	52	47.500	Cavia_aperea
ENSXCOG00000009547	secisbp2	63	57.849	ENSCPBG00000005608	SECISBP2	69	57.062	Chrysemys_picta_bellii
ENSXCOG00000009547	secisbp2	54	60.854	ENSCSEG00000010220	-	79	60.854	Cynoglossus_semilaevis
ENSXCOG00000009547	secisbp2	88	76.020	ENSCVAG00000015876	secisbp2	62	76.020	Cyprinodon_variegatus
ENSXCOG00000009547	secisbp2	76	59.204	ENSDARG00000073892	secisbp2	75	57.339	Danio_rerio
ENSXCOG00000009547	secisbp2	66	43.620	ENSEBUG00000008208	secisbp2	93	43.620	Eptatretus_burgeri
ENSXCOG00000009547	secisbp2	67	67.771	ENSELUG00000014795	-	79	67.262	Esox_lucius
ENSXCOG00000009547	secisbp2	72	50.904	ENSFCAG00000004214	SECISBP2	50	46.727	Felis_catus
ENSXCOG00000009547	secisbp2	88	77.551	ENSFHEG00000004095	secisbp2	60	76.633	Fundulus_heteroclitus
ENSXCOG00000009547	secisbp2	53	83.019	ENSGMOG00000017234	secisbp2	75	56.021	Gadus_morhua
ENSXCOG00000009547	secisbp2	87	92.958	ENSGAFG00000016947	secisbp2	60	92.958	Gambusia_affinis
ENSXCOG00000009547	secisbp2	72	63.910	ENSGACG00000013757	secisbp2	65	63.158	Gasterosteus_aculeatus
ENSXCOG00000009547	secisbp2	74	62.972	ENSHBUG00000007014	secisbp2	94	62.972	Haplochromis_burtoni
ENSXCOG00000009547	secisbp2	67	61.190	ENSHCOG00000008010	secisbp2	50	61.190	Hippocampus_comes
ENSXCOG00000009547	secisbp2	76	72.222	ENSKMAG00000007129	secisbp2	62	66.751	Kryptolebias_marmoratus
ENSXCOG00000009547	secisbp2	87	66.000	ENSLBEG00000026023	secisbp2	59	66.000	Labrus_bergylta
ENSXCOG00000009547	secisbp2	50	73.780	ENSLACG00000005735	SECISBP2	53	70.718	Latimeria_chalumnae
ENSXCOG00000009547	secisbp2	85	65.000	ENSMAMG00000006644	secisbp2	59	65.000	Mastacembelus_armatus
ENSXCOG00000009547	secisbp2	88	58.491	ENSMZEG00005013614	secisbp2	67	58.491	Maylandia_zebra
ENSXCOG00000009547	secisbp2	73	64.785	ENSMMOG00000017977	secisbp2	90	64.785	Mola_mola
ENSXCOG00000009547	secisbp2	88	65.196	ENSMALG00000004907	secisbp2	62	65.196	Monopterus_albus
ENSXCOG00000009547	secisbp2	64	45.559	MGP_CAROLIEiJ_G0024231	Secisbp2l	76	46.130	Mus_caroli
ENSXCOG00000009547	secisbp2	64	45.559	ENSMUSG00000035093	Secisbp2l	75	46.130	Mus_musculus
ENSXCOG00000009547	secisbp2	64	45.272	MGP_PahariEiJ_G0025677	Secisbp2l	76	45.820	Mus_pahari
ENSXCOG00000009547	secisbp2	64	45.559	MGP_SPRETEiJ_G0025151	Secisbp2l	76	46.130	Mus_spretus
ENSXCOG00000009547	secisbp2	79	48.916	ENSMPUG00000008495	-	74	48.916	Mustela_putorius_furo
ENSXCOG00000009547	secisbp2	88	64.677	ENSNBRG00000022804	secisbp2	58	64.677	Neolamprologus_brichardi
ENSXCOG00000009547	secisbp2	77	65.517	ENSONIG00000016931	secisbp2	97	64.599	Oreochromis_niloticus
ENSXCOG00000009547	secisbp2	73	65.217	ENSORLG00000000343	secisbp2	70	65.217	Oryzias_latipes
ENSXCOG00000009547	secisbp2	88	65.473	ENSORLG00020012878	secisbp2	70	65.473	Oryzias_latipes_hni
ENSXCOG00000009547	secisbp2	73	65.217	ENSORLG00015004559	secisbp2	53	65.217	Oryzias_latipes_hsok
ENSXCOG00000009547	secisbp2	73	65.385	ENSOMEG00000008595	secisbp2	54	65.641	Oryzias_melastigma
ENSXCOG00000009547	secisbp2	72	51.036	ENSPPRG00000023911	SECISBP2	50	47.630	Panthera_pardus
ENSXCOG00000009547	secisbp2	72	50.478	ENSPSIG00000016257	SECISBP2	55	48.430	Pelodiscus_sinensis
ENSXCOG00000009547	secisbp2	51	45.185	ENSPMAG00000002525	-	92	32.703	Petromyzon_marinus
ENSXCOG00000009547	secisbp2	88	90.541	ENSPFOG00000008146	secisbp2	73	90.476	Poecilia_formosa
ENSXCOG00000009547	secisbp2	73	84.184	ENSPLAG00000004505	secisbp2	90	84.184	Poecilia_latipinna
ENSXCOG00000009547	secisbp2	88	90.541	ENSPMEG00000013702	secisbp2	61	90.541	Poecilia_mexicana
ENSXCOG00000009547	secisbp2	88	86.486	ENSPREG00000008117	secisbp2	62	86.486	Poecilia_reticulata
ENSXCOG00000009547	secisbp2	88	58.491	ENSPNYG00000016799	secisbp2	67	58.491	Pundamilia_nyererei
ENSXCOG00000009547	secisbp2	72	60.305	ENSPNAG00000029922	secisbp2	53	60.305	Pygocentrus_nattereri
ENSXCOG00000009547	secisbp2	71	49.081	ENSRROG00000030742	SECISBP2	50	50.524	Rhinopithecus_roxellana
ENSXCOG00000009547	secisbp2	73	49.616	ENSSBOG00000015392	SECISBP2	54	51.020	Saimiri_boliviensis_boliviensis
ENSXCOG00000009547	secisbp2	77	58.080	ENSSFOG00015010409	secisbp2	50	58.080	Scleropages_formosus
ENSXCOG00000009547	secisbp2	88	65.122	ENSSMAG00000008472	secisbp2	66	65.122	Scophthalmus_maximus
ENSXCOG00000009547	secisbp2	88	66.418	ENSSDUG00000002089	secisbp2	62	66.169	Seriola_dumerili
ENSXCOG00000009547	secisbp2	88	66.667	ENSSLDG00000003510	secisbp2	59	66.667	Seriola_lalandi_dorsalis
ENSXCOG00000009547	secisbp2	69	53.125	ENSSPUG00000009635	SECISBP2	51	53.125	Sphenodon_punctatus
ENSXCOG00000009547	secisbp2	88	67.901	ENSSPAG00000013606	secisbp2	59	67.901	Stegastes_partitus
ENSXCOG00000009547	secisbp2	76	50.488	ENSTGUG00000000440	SECISBP2	73	50.488	Taeniopygia_guttata
ENSXCOG00000009547	secisbp2	85	61.283	ENSTRUG00000016835	secisbp2	63	61.283	Takifugu_rubripes
ENSXCOG00000009547	secisbp2	70	61.979	ENSTNIG00000015576	secisbp2	82	62.374	Tetraodon_nigroviridis
ENSXCOG00000009547	secisbp2	74	49.875	ENSUAMG00000016243	SECISBP2	51	50.376	Ursus_americanus
ENSXCOG00000009547	secisbp2	74	50.498	ENSVVUG00000022278	SECISBP2	50	50.864	Vulpes_vulpes
ENSXCOG00000009547	secisbp2	76	48.441	ENSXETG00000029955	SECISBP2	76	48.441	Xenopus_tropicalis
ENSXCOG00000009547	secisbp2	87	97.183	ENSXMAG00000003090	secisbp2	60	97.183	Xiphophorus_maculatus