EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000009794 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 5291 bases
Position: chrKQ557210.1:29921476-29926766
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012936	zf-C2H2	PF00096.26	7.4e-39	1	7
ENSXCOP00000012936	zf-C2H2	PF00096.26	7.4e-39	2	7
ENSXCOP00000012936	zf-C2H2	PF00096.26	7.4e-39	3	7
ENSXCOP00000012936	zf-C2H2	PF00096.26	7.4e-39	4	7
ENSXCOP00000012936	zf-C2H2	PF00096.26	7.4e-39	5	7
ENSXCOP00000012936	zf-C2H2	PF00096.26	7.4e-39	6	7
ENSXCOP00000012936	zf-C2H2	PF00096.26	7.4e-39	7	7
ENSXCOP00000012936	zf-met	PF12874.7	3.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000013097	-	1107	-	ENSXCOP00000012936	368 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000009794	-	81	44.000	ENSXCOG00000002869	-	59	44.000
ENSXCOG00000009794	-	79	39.450	ENSXCOG00000003530	-	82	40.625
ENSXCOG00000009794	-	83	46.032	ENSXCOG00000000354	-	72	46.032
ENSXCOG00000009794	-	74	39.442	ENSXCOG00000003093	-	72	39.442
ENSXCOG00000009794	-	93	43.548	ENSXCOG00000007957	-	93	43.548
ENSXCOG00000009794	-	80	36.577	ENSXCOG00000015947	-	92	36.242
ENSXCOG00000009794	-	92	46.774	ENSXCOG00000009003	-	99	46.296
ENSXCOG00000009794	-	73	41.827	ENSXCOG00000010259	-	63	41.827
ENSXCOG00000009794	-	97	45.382	ENSXCOG00000011725	-	100	46.241
ENSXCOG00000009794	-	79	52.273	ENSXCOG00000019377	-	97	52.273
ENSXCOG00000009794	-	78	35.106	ENSXCOG00000011372	-	76	35.106
ENSXCOG00000009794	-	79	42.373	ENSXCOG00000017528	snai1a	50	41.837
ENSXCOG00000009794	-	77	36.283	ENSXCOG00000018980	-	62	35.714
ENSXCOG00000009794	-	75	35.897	ENSXCOG00000019675	scrt1b	51	35.897
ENSXCOG00000009794	-	71	41.758	ENSXCOG00000018615	-	86	41.758
ENSXCOG00000009794	-	90	42.208	ENSXCOG00000003493	-	95	42.208
ENSXCOG00000009794	-	75	40.994	ENSXCOG00000003499	-	53	40.994
ENSXCOG00000009794	-	77	41.905	ENSXCOG00000020769	-	88	41.905
ENSXCOG00000009794	-	78	52.381	ENSXCOG00000008062	-	99	48.276
ENSXCOG00000009794	-	74	46.117	ENSXCOG00000012924	-	92	46.117
ENSXCOG00000009794	-	89	43.071	ENSXCOG00000012921	-	98	42.857
ENSXCOG00000009794	-	97	41.892	ENSXCOG00000016860	-	99	45.614
ENSXCOG00000009794	-	99	41.566	ENSXCOG00000003537	-	93	41.566
ENSXCOG00000009794	-	88	45.679	ENSXCOG00000007139	-	85	45.679
ENSXCOG00000009794	-	86	40.625	ENSXCOG00000007396	-	86	40.625
ENSXCOG00000009794	-	94	51.456	ENSXCOG00000019443	-	98	46.097
ENSXCOG00000009794	-	91	40.157	ENSXCOG00000007937	-	88	40.157
ENSXCOG00000009794	-	88	34.874	ENSXCOG00000002857	-	95	38.182
ENSXCOG00000009794	-	92	40.984	ENSXCOG00000003441	-	72	34.074
ENSXCOG00000009794	-	86	38.941	ENSXCOG00000003896	-	67	38.941
ENSXCOG00000009794	-	97	43.590	ENSXCOG00000007406	-	100	44.030
ENSXCOG00000009794	-	87	50.794	ENSXCOG00000009781	-	83	50.794
ENSXCOG00000009794	-	86	39.450	ENSXCOG00000015084	snai2	60	39.450
ENSXCOG00000009794	-	87	38.710	ENSXCOG00000009668	-	77	38.710
ENSXCOG00000009794	-	97	34.982	ENSXCOG00000009665	-	76	45.000
ENSXCOG00000009794	-	76	50.394	ENSXCOG00000013004	-	69	50.394
ENSXCOG00000009794	-	73	40.122	ENSXCOG00000009768	-	80	40.122
ENSXCOG00000009794	-	76	44.762	ENSXCOG00000007945	-	88	44.762
ENSXCOG00000009794	-	73	47.826	ENSXCOG00000007941	-	83	47.826
ENSXCOG00000009794	-	74	40.594	ENSXCOG00000012458	-	63	40.594
ENSXCOG00000009794	-	75	47.525	ENSXCOG00000010950	si:dkey-210j14.3	63	47.525
ENSXCOG00000009794	-	76	50.877	ENSXCOG00000010948	-	61	50.877
ENSXCOG00000009794	-	83	37.209	ENSXCOG00000009597	ZNF319	87	38.235
ENSXCOG00000009794	-	86	41.872	ENSXCOG00000019492	-	99	41.872
ENSXCOG00000009794	-	90	36.318	ENSXCOG00000003435	-	99	36.318
ENSXCOG00000009794	-	98	39.111	ENSXCOG00000003431	-	95	39.111
ENSXCOG00000009794	-	68	39.683	ENSXCOG00000003438	-	72	39.683
ENSXCOG00000009794	-	96	46.341	ENSXCOG00000001116	-	99	45.324
ENSXCOG00000009794	-	69	35.570	ENSXCOG00000018315	-	92	35.570
ENSXCOG00000009794	-	88	47.951	ENSXCOG00000010507	-	59	47.951
ENSXCOG00000009794	-	84	41.850	ENSXCOG00000009772	-	90	41.850
ENSXCOG00000009794	-	76	37.445	ENSXCOG00000009997	-	52	37.445
ENSXCOG00000009794	-	73	39.326	ENSXCOG00000009992	zbtb47b	78	39.326
ENSXCOG00000009794	-	91	43.775	ENSXCOG00000008116	-	98	47.368
ENSXCOG00000009794	-	74	47.273	ENSXCOG00000006461	-	55	47.273
ENSXCOG00000009794	-	88	45.161	ENSXCOG00000002473	-	96	45.161
ENSXCOG00000009794	-	76	43.114	ENSXCOG00000003468	-	80	41.451
ENSXCOG00000009794	-	83	33.708	ENSXCOG00000013066	-	88	33.708
ENSXCOG00000009794	-	72	37.963	ENSXCOG00000012645	-	50	37.963
ENSXCOG00000009794	-	97	44.488	ENSXCOG00000007994	-	98	43.911
ENSXCOG00000009794	-	97	40.303	ENSXCOG00000015312	-	96	42.587
ENSXCOG00000009794	-	86	41.667	ENSXCOG00000019482	-	94	41.667
ENSXCOG00000009794	-	79	44.286	ENSXCOG00000007979	-	77	44.286
ENSXCOG00000009794	-	90	33.333	ENSXCOG00000013504	znf384l	65	33.333
ENSXCOG00000009794	-	95	45.213	ENSXCOG00000001200	-	91	45.213
ENSXCOG00000009794	-	80	45.763	ENSXCOG00000009186	-	93	45.763
ENSXCOG00000009794	-	80	42.562	ENSXCOG00000007076	-	99	42.562
ENSXCOG00000009794	-	75	34.783	ENSXCOG00000008567	prdm5	77	34.783
ENSXCOG00000009794	-	76	44.872	ENSXCOG00000008003	-	54	44.872
ENSXCOG00000009794	-	92	45.968	ENSXCOG00000006614	-	98	45.968
ENSXCOG00000009794	-	85	45.854	ENSXCOG00000007414	-	92	45.854
ENSXCOG00000009794	-	72	43.373	ENSXCOG00000007413	-	64	43.373
ENSXCOG00000009794	-	90	47.059	ENSXCOG00000010488	-	69	47.059
ENSXCOG00000009794	-	95	39.889	ENSXCOG00000009785	-	84	42.105
ENSXCOG00000009794	-	83	35.714	ENSXCOG00000007499	zbtb41	68	35.714
ENSXCOG00000009794	-	74	31.349	ENSXCOG00000003001	-	86	31.349
ENSXCOG00000009794	-	74	46.809	ENSXCOG00000005697	-	95	46.809
ENSXCOG00000009794	-	80	31.282	ENSXCOG00000002714	-	92	31.282
ENSXCOG00000009794	-	91	37.143	ENSXCOG00000016567	-	79	40.789
ENSXCOG00000009794	-	82	45.249	ENSXCOG00000017328	-	70	45.249
ENSXCOG00000009794	-	89	38.235	ENSXCOG00000006951	-	90	38.235
ENSXCOG00000009794	-	74	39.623	ENSXCOG00000008056	-	63	39.623
ENSXCOG00000009794	-	94	39.806	ENSXCOG00000019401	-	93	39.806
ENSXCOG00000009794	-	98	37.052	ENSXCOG00000016307	-	93	40.741
ENSXCOG00000009794	-	86	46.296	ENSXCOG00000008083	-	92	45.570
ENSXCOG00000009794	-	75	45.133	ENSXCOG00000003451	-	90	45.133
ENSXCOG00000009794	-	89	32.948	ENSXCOG00000019149	znf526	84	30.620
ENSXCOG00000009794	-	68	49.012	ENSXCOG00000016117	-	95	49.012
ENSXCOG00000009794	-	72	44.503	ENSXCOG00000010576	-	90	41.667
ENSXCOG00000009794	-	92	46.961	ENSXCOG00000019484	-	97	51.282
ENSXCOG00000009794	-	80	41.935	ENSXCOG00000019481	-	88	40.758
ENSXCOG00000009794	-	90	58.333	ENSXCOG00000009777	-	87	58.333
ENSXCOG00000009794	-	88	45.714	ENSXCOG00000019382	-	85	44.128
ENSXCOG00000009794	-	74	35.217	ENSXCOG00000013870	-	72	34.545
ENSXCOG00000009794	-	96	40.483	ENSXCOG00000000528	-	99	45.175
ENSXCOG00000009794	-	83	42.969	ENSXCOG00000020768	-	71	42.969
ENSXCOG00000009794	-	89	44.019	ENSXCOG00000003484	-	86	40.113
ENSXCOG00000009794	-	83	47.222	ENSXCOG00000002512	-	84	47.368
ENSXCOG00000009794	-	92	49.576	ENSXCOG00000002898	-	82	48.980
ENSXCOG00000009794	-	98	42.105	ENSXCOG00000001226	-	99	43.874
ENSXCOG00000009794	-	82	42.718	ENSXCOG00000013213	-	52	42.718
ENSXCOG00000009794	-	67	43.373	ENSXCOG00000006553	-	93	38.636
ENSXCOG00000009794	-	73	42.481	ENSXCOG00000003532	-	81	41.704
ENSXCOG00000009794	-	97	51.786	ENSXCOG00000003538	-	95	51.786
ENSXCOG00000009794	-	92	44.633	ENSXCOG00000007529	-	99	46.043
ENSXCOG00000009794	-	74	39.852	ENSXCOG00000017871	zgc:113343	63	39.852
ENSXCOG00000009794	-	78	46.061	ENSXCOG00000008978	-	92	46.061
ENSXCOG00000009794	-	96	42.544	ENSXCOG00000019457	-	96	43.158
ENSXCOG00000009794	-	75	38.679	ENSXCOG00000014367	scrt2	54	33.813
ENSXCOG00000009794	-	92	40.426	ENSXCOG00000014363	-	63	40.426
ENSXCOG00000009794	-	74	38.318	ENSXCOG00000014361	-	61	38.318
ENSXCOG00000009794	-	99	40.654	ENSXCOG00000003472	-	99	38.321
ENSXCOG00000009794	-	53	34.532	ENSXCOG00000019861	-	54	34.532
ENSXCOG00000009794	-	95	44.944	ENSXCOG00000007368	-	99	44.944
ENSXCOG00000009794	-	91	41.278	ENSXCOG00000009798	-	97	43.501
ENSXCOG00000009794	-	94	52.459	ENSXCOG00000007981	-	90	52.459
ENSXCOG00000009794	-	96	40.351	ENSXCOG00000007987	-	90	41.241
ENSXCOG00000009794	-	91	37.008	ENSXCOG00000007376	-	100	39.568
ENSXCOG00000009794	-	73	48.333	ENSXCOG00000009674	-	81	48.333
ENSXCOG00000009794	-	75	46.154	ENSXCOG00000000254	-	69	46.154
ENSXCOG00000009794	-	93	53.125	ENSXCOG00000015441	-	90	53.125
ENSXCOG00000009794	-	80	42.806	ENSXCOG00000018253	-	92	42.806
ENSXCOG00000009794	-	92	47.826	ENSXCOG00000010567	-	98	40.708
ENSXCOG00000009794	-	88	38.571	ENSXCOG00000013306	-	83	38.571
ENSXCOG00000009794	-	91	35.628	ENSXCOG00000013787	-	77	34.513
ENSXCOG00000009794	-	90	38.095	ENSXCOG00000001292	-	96	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009794	-	83	45.387	ENSAMXG00000000353	-	93	45.387	Astyanax_mexicanus
ENSXCOG00000009794	-	89	42.797	ENSAMXG00000029783	-	97	42.029	Astyanax_mexicanus
ENSXCOG00000009794	-	81	45.122	ENSAMXG00000034096	-	87	45.122	Astyanax_mexicanus
ENSXCOG00000009794	-	76	44.094	ENSAMXG00000044028	-	96	44.094	Astyanax_mexicanus
ENSXCOG00000009794	-	74	43.820	ENSAMXG00000043019	-	94	43.820	Astyanax_mexicanus
ENSXCOG00000009794	-	83	41.414	ENSBTAG00000014593	-	86	41.538	Bos_taurus
ENSXCOG00000009794	-	76	42.969	ENSBTAG00000040358	-	100	42.969	Bos_taurus
ENSXCOG00000009794	-	87	43.590	ENSCSAG00000000471	-	99	43.590	Chlorocebus_sabaeus
ENSXCOG00000009794	-	93	40.870	ENSCPBG00000002430	-	81	42.152	Chrysemys_picta_bellii
ENSXCOG00000009794	-	93	35.426	ENSCPBG00000009609	-	83	38.043	Chrysemys_picta_bellii
ENSXCOG00000009794	-	79	42.481	ENSDNOG00000042588	-	81	42.481	Dasypus_novemcinctus
ENSXCOG00000009794	-	76	36.614	ENSEBUG00000016969	-	77	38.614	Eptatretus_burgeri
ENSXCOG00000009794	-	76	41.313	ENSEBUG00000013221	-	82	41.313	Eptatretus_burgeri
ENSXCOG00000009794	-	76	40.873	ENSEBUG00000016164	-	71	40.873	Eptatretus_burgeri
ENSXCOG00000009794	-	93	36.059	ENSELUG00000019008	-	87	39.437	Esox_lucius
ENSXCOG00000009794	-	80	39.777	ENSFCAG00000043966	-	99	39.777	Felis_catus
ENSXCOG00000009794	-	92	49.835	ENSGAFG00000013048	-	98	50.000	Gambusia_affinis
ENSXCOG00000009794	-	92	45.161	ENSGAFG00000021131	-	92	45.161	Gambusia_affinis
ENSXCOG00000009794	-	75	43.223	ENSGGOG00000042802	-	99	43.223	Gorilla_gorilla
ENSXCOG00000009794	-	90	48.315	ENSHCOG00000014713	-	94	47.744	Hippocampus_comes
ENSXCOG00000009794	-	85	46.926	ENSHCOG00000019512	-	96	46.926	Hippocampus_comes
ENSXCOG00000009794	-	88	43.590	ENSMFAG00000008648	-	99	43.590	Macaca_fascicularis
ENSXCOG00000009794	-	88	43.590	ENSMNEG00000001556	-	99	43.590	Macaca_nemestrina
ENSXCOG00000009794	-	87	43.590	ENSMLEG00000007035	-	99	43.590	Mandrillus_leucophaeus
ENSXCOG00000009794	-	81	41.026	ENSMAUG00000015263	-	63	41.026	Mesocricetus_auratus
ENSXCOG00000009794	-	81	42.857	ENSMOCG00000003394	-	61	42.857	Microtus_ochrogaster
ENSXCOG00000009794	-	90	44.815	ENSMODG00000028916	-	70	44.815	Monodelphis_domestica
ENSXCOG00000009794	-	74	46.032	ENSMPUG00000006562	-	55	46.032	Mustela_putorius_furo
ENSXCOG00000009794	-	84	45.055	ENSNBRG00000010194	-	74	43.125	Neolamprologus_brichardi
ENSXCOG00000009794	-	75	42.857	ENSNLEG00000018988	-	98	42.857	Nomascus_leucogenys
ENSXCOG00000009794	-	90	40.989	ENSMEUG00000012153	-	67	41.406	Notamacropus_eugenii
ENSXCOG00000009794	-	76	52.381	ENSMEUG00000006978	-	81	40.502	Notamacropus_eugenii
ENSXCOG00000009794	-	86	36.269	ENSOGAG00000024538	-	59	35.593	Otolemur_garnettii
ENSXCOG00000009794	-	75	43.223	ENSPPAG00000014496	-	99	43.223	Pan_paniscus
ENSXCOG00000009794	-	87	43.956	ENSPANG00000030207	-	99	43.956	Papio_anubis
ENSXCOG00000009794	-	85	49.468	ENSPSIG00000010405	-	99	45.318	Pelodiscus_sinensis
ENSXCOG00000009794	-	84	37.719	ENSPSIG00000009650	-	70	38.645	Pelodiscus_sinensis
ENSXCOG00000009794	-	81	41.327	ENSPEMG00000010242	-	68	41.327	Peromyscus_maniculatus_bairdii
ENSXCOG00000009794	-	92	55.556	ENSPLAG00000020710	-	92	55.556	Poecilia_latipinna
ENSXCOG00000009794	-	96	46.617	ENSPLAG00000010389	-	91	40.984	Poecilia_latipinna
ENSXCOG00000009794	-	86	43.617	ENSPLAG00000021062	-	97	42.349	Poecilia_latipinna
ENSXCOG00000009794	-	80	41.549	ENSPCAG00000009106	-	82	41.549	Procavia_capensis
ENSXCOG00000009794	-	83	33.594	ENSPNYG00000024243	-	92	33.813	Pundamilia_nyererei
ENSXCOG00000009794	-	79	46.316	ENSPNAG00000018644	-	96	46.316	Pygocentrus_nattereri
ENSXCOG00000009794	-	83	39.344	ENSSHAG00000001415	-	85	39.344	Sarcophilus_harrisii
ENSXCOG00000009794	-	92	39.037	ENSSDUG00000009534	-	83	39.037	Seriola_dumerili
ENSXCOG00000009794	-	96	39.544	ENSSLDG00000013760	-	98	39.544	Seriola_lalandi_dorsalis
ENSXCOG00000009794	-	86	43.333	ENSSPUG00000007147	-	98	43.333	Sphenodon_punctatus
ENSXCOG00000009794	-	84	41.414	ENSTRUG00000006896	-	85	41.414	Takifugu_rubripes
ENSXCOG00000009794	-	97	41.176	ENSVPAG00000011867	-	87	39.465	Vicugna_pacos