EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000009809 (Gene tree)
Gene ID: -
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3845 bases
Position: chrKQ557214.1:11817862-11821706
Accession: ZDB-GENE-030131-9345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000012955	RRS1	PF04939.12	2.6e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000013115	-	1062	-	ENSXCOP00000012955	353 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000009809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000009809	rrs1	89	67.937	ENSG00000179041	RRS1	82	68.562	Homo_sapiens
ENSXCOG00000009809	rrs1	90	84.858	ENSATEG00000011743	rrs1	91	84.639	Anabas_testudineus
ENSXCOG00000009809	rrs1	93	67.273	ENSANAG00000018116	RRS1	82	69.231	Aotus_nancymaae
ENSXCOG00000009809	rrs1	95	68.661	ENSAMXG00000037893	rrs1	77	75.168	Astyanax_mexicanus
ENSXCOG00000009809	rrs1	95	64.095	ENSBTAG00000016716	RRS1	82	67.224	Bos_taurus
ENSXCOG00000009809	rrs1	74	46.667	WBGene00007617	rrbs-1	79	46.667	Caenorhabditis_elegans
ENSXCOG00000009809	rrs1	93	66.667	ENSCJAG00000022034	RRS1	82	68.562	Callithrix_jacchus
ENSXCOG00000009809	rrs1	88	66.881	ENSCAFG00000007313	RRS1	82	67.559	Canis_familiaris
ENSXCOG00000009809	rrs1	88	66.881	ENSCAFG00020016049	-	82	67.559	Canis_lupus_dingo
ENSXCOG00000009809	rrs1	88	66.881	ENSCAFG00020020365	-	82	67.559	Canis_lupus_dingo
ENSXCOG00000009809	rrs1	89	66.984	ENSCHIG00000009141	RRS1	82	67.559	Capra_hircus
ENSXCOG00000009809	rrs1	89	67.183	ENSCPOG00000000647	RRS1	84	69.231	Cavia_porcellus
ENSXCOG00000009809	rrs1	93	67.879	ENSCCAG00000032186	RRS1	82	69.565	Cebus_capucinus
ENSXCOG00000009809	rrs1	89	68.571	ENSCATG00000016944	RRS1	82	69.231	Cercocebus_atys
ENSXCOG00000009809	rrs1	95	62.745	ENSCSAG00000018552	RRS1	82	68.896	Chlorocebus_sabaeus
ENSXCOG00000009809	rrs1	89	67.619	ENSCHOG00000002455	RRS1	82	68.227	Choloepus_hoffmanni
ENSXCOG00000009809	rrs1	89	58.567	ENSCPBG00000021374	RRS1	86	59.934	Chrysemys_picta_bellii
ENSXCOG00000009809	rrs1	86	54.313	ENSCING00000002177	-	89	56.207	Ciona_intestinalis
ENSXCOG00000009809	rrs1	87	53.698	ENSCSAVG00000011819	-	89	55.172	Ciona_savignyi
ENSXCOG00000009809	rrs1	95	65.875	ENSCANG00000012718	RRS1	82	69.231	Colobus_angolensis_palliatus
ENSXCOG00000009809	rrs1	95	65.680	ENSCGRG00001002391	-	82	67.893	Cricetulus_griseus_chok1gshd
ENSXCOG00000009809	rrs1	91	66.770	ENSCGRG00001015575	-	86	67.785	Cricetulus_griseus_chok1gshd
ENSXCOG00000009809	rrs1	86	69.536	ENSCSEG00000014750	rrs1	81	69.463	Cynoglossus_semilaevis
ENSXCOG00000009809	rrs1	86	76.974	ENSCVAG00000017878	rrs1	84	76.510	Cyprinodon_variegatus
ENSXCOG00000009809	rrs1	85	79.599	ENSDARG00000003941	rrs1	86	79.798	Danio_rerio
ENSXCOG00000009809	rrs1	89	66.139	ENSDNOG00000017900	RRS1	81	66.890	Dasypus_novemcinctus
ENSXCOG00000009809	rrs1	59	68.900	ENSDORG00000026331	Rrs1	70	69.355	Dipodomys_ordii
ENSXCOG00000009809	rrs1	90	45.748	FBgn0052409	CG32409	84	48.649	Drosophila_melanogaster
ENSXCOG00000009809	rrs1	57	66.000	ENSETEG00000000935	-	55	66.000	Echinops_telfairi
ENSXCOG00000009809	rrs1	84	57.718	ENSEBUG00000013506	rrs1	96	58.947	Eptatretus_burgeri
ENSXCOG00000009809	rrs1	89	67.619	ENSEASG00005001691	RRS1	82	68.227	Equus_asinus_asinus
ENSXCOG00000009809	rrs1	95	65.476	ENSECAG00000004492	RRS1	89	68.227	Equus_caballus
ENSXCOG00000009809	rrs1	89	66.984	ENSEEUG00000013719	RRS1	82	67.450	Erinaceus_europaeus
ENSXCOG00000009809	rrs1	88	66.559	ENSFCAG00000014332	RRS1	82	67.450	Felis_catus
ENSXCOG00000009809	rrs1	83	56.146	ENSGALG00000030890	RRS1	85	56.536	Gallus_gallus
ENSXCOG00000009809	rrs1	85	79.734	ENSGACG00000002969	rrs1	84	79.866	Gasterosteus_aculeatus
ENSXCOG00000009809	rrs1	89	58.255	ENSGAGG00000023718	RRS1	91	56.881	Gopherus_agassizii
ENSXCOG00000009809	rrs1	89	68.571	ENSGGOG00000026663	RRS1	82	69.231	Gorilla_gorilla
ENSXCOG00000009809	rrs1	93	66.667	ENSHGLG00000021423	RRS1	82	68.896	Heterocephalus_glaber_female
ENSXCOG00000009809	rrs1	93	66.667	ENSHGLG00100020640	RRS1	82	68.896	Heterocephalus_glaber_male
ENSXCOG00000009809	rrs1	99	72.676	ENSHCOG00000015358	rrs1	83	77.441	Hippocampus_comes
ENSXCOG00000009809	rrs1	89	72.727	ENSIPUG00000014412	rrs1	85	75.758	Ictalurus_punctatus
ENSXCOG00000009809	rrs1	95	64.589	ENSSTOG00000026310	RRS1	82	69.231	Ictidomys_tridecemlineatus
ENSXCOG00000009809	rrs1	86	66.885	ENSJJAG00000011507	-	81	67.450	Jaculus_jaculus
ENSXCOG00000009809	rrs1	78	61.511	ENSJJAG00000020395	-	81	61.511	Jaculus_jaculus
ENSXCOG00000009809	rrs1	86	84.768	ENSKMAG00000008238	rrs1	88	84.899	Kryptolebias_marmoratus
ENSXCOG00000009809	rrs1	86	77.049	ENSLACG00000004058	RRS1	90	77.778	Latimeria_chalumnae
ENSXCOG00000009809	rrs1	88	77.885	ENSLOCG00000017812	rrs1	87	79.461	Lepisosteus_oculatus
ENSXCOG00000009809	rrs1	89	66.984	ENSLAFG00000015405	RRS1	81	67.893	Loxodonta_africana
ENSXCOG00000009809	rrs1	95	63.408	ENSMFAG00000042747	RRS1	82	69.231	Macaca_fascicularis
ENSXCOG00000009809	rrs1	95	63.408	ENSMMUG00000000886	RRS1	82	69.231	Macaca_mulatta
ENSXCOG00000009809	rrs1	95	63.408	ENSMNEG00000011696	RRS1	82	69.231	Macaca_nemestrina
ENSXCOG00000009809	rrs1	89	68.571	ENSMLEG00000004794	RRS1	82	69.231	Mandrillus_leucophaeus
ENSXCOG00000009809	rrs1	84	84.564	ENSMZEG00005004349	RRS1	84	84.564	Maylandia_zebra
ENSXCOG00000009809	rrs1	95	66.568	ENSMAUG00000005392	Rrs1	82	68.896	Mesocricetus_auratus
ENSXCOG00000009809	rrs1	99	62.745	ENSMOCG00000015862	Rrs1	77	67.559	Microtus_ochrogaster
ENSXCOG00000009809	rrs1	89	65.931	ENSMODG00000024952	RRS1	82	66.667	Monodelphis_domestica
ENSXCOG00000009809	rrs1	94	66.168	MGP_CAROLIEiJ_G0013936	Rrs1	83	68.896	Mus_caroli
ENSXCOG00000009809	rrs1	95	66.272	ENSMUSG00000061024	Rrs1	82	68.896	Mus_musculus
ENSXCOG00000009809	rrs1	95	65.192	MGP_PahariEiJ_G0023883	Rrs1	82	68.227	Mus_pahari
ENSXCOG00000009809	rrs1	95	66.272	MGP_SPRETEiJ_G0014739	Rrs1	82	68.896	Mus_spretus
ENSXCOG00000009809	rrs1	95	65.774	ENSMPUG00000018626	RRS1	81	67.893	Mustela_putorius_furo
ENSXCOG00000009809	rrs1	95	64.688	ENSNGAG00000012904	Rrs1	82	68.227	Nannospalax_galili
ENSXCOG00000009809	rrs1	67	70.168	ENSNLEG00000027730	RRS1	73	71.171	Nomascus_leucogenys
ENSXCOG00000009809	rrs1	95	81.138	ENSONIG00000014187	rrs1	87	84.899	Oreochromis_niloticus
ENSXCOG00000009809	rrs1	94	59.760	ENSOANG00000012348	RRS1	81	61.000	Ornithorhynchus_anatinus
ENSXCOG00000009809	rrs1	88	67.846	ENSOCUG00000013490	RRS1	81	68.896	Oryctolagus_cuniculus
ENSXCOG00000009809	rrs1	90	73.817	ENSOMEG00000008525	rrs1	85	75.503	Oryzias_melastigma
ENSXCOG00000009809	rrs1	92	64.615	ENSOGAG00000001085	RRS1	82	66.555	Otolemur_garnettii
ENSXCOG00000009809	rrs1	89	62.540	ENSOARG00000017417	RRS1	80	62.876	Ovis_aries
ENSXCOG00000009809	rrs1	89	68.254	ENSPPAG00000024378	RRS1	82	68.896	Pan_paniscus
ENSXCOG00000009809	rrs1	88	66.559	ENSPPRG00000021408	RRS1	82	67.450	Panthera_pardus
ENSXCOG00000009809	rrs1	89	67.937	ENSPTRG00000030988	RRS1	82	68.562	Pan_troglodytes
ENSXCOG00000009809	rrs1	95	46.927	ENSPANG00000035974	RRS1	78	49.664	Papio_anubis
ENSXCOG00000009809	rrs1	84	74.832	ENSPKIG00000007953	rrs1	86	75.254	Paramormyrops_kingsleyae
ENSXCOG00000009809	rrs1	94	65.165	ENSPEMG00000014427	Rrs1	82	67.893	Peromyscus_maniculatus_bairdii
ENSXCOG00000009809	rrs1	85	62.914	ENSPMAG00000006513	rrs1	78	63.300	Petromyzon_marinus
ENSXCOG00000009809	rrs1	86	65.686	ENSPCIG00000026695	RRS1	84	66.000	Phascolarctos_cinereus
ENSXCOG00000009809	rrs1	92	95.988	ENSPFOG00000020722	rrs1	98	95.925	Poecilia_formosa
ENSXCOG00000009809	rrs1	86	82.450	ENSPREG00000019960	rrs1	89	83.072	Poecilia_reticulata
ENSXCOG00000009809	rrs1	84	69.360	ENSPPYG00000018637	RRS1	99	69.595	Pongo_abelii
ENSXCOG00000009809	rrs1	93	66.364	ENSPCAG00000009115	RRS1	82	67.893	Procavia_capensis
ENSXCOG00000009809	rrs1	82	78.694	ENSPNAG00000021707	rrs1	85	78.523	Pygocentrus_nattereri
ENSXCOG00000009809	rrs1	95	65.179	ENSRNOG00000007240	Rrs1	82	68.562	Rattus_norvegicus
ENSXCOG00000009809	rrs1	89	68.254	ENSRBIG00000009132	RRS1	82	68.896	Rhinopithecus_bieti
ENSXCOG00000009809	rrs1	89	68.254	ENSRROG00000013472	RRS1	82	68.896	Rhinopithecus_roxellana
ENSXCOG00000009809	rrs1	86	69.079	ENSSBOG00000012639	-	84	68.896	Saimiri_boliviensis_boliviensis
ENSXCOG00000009809	rrs1	86	68.852	ENSSBOG00000011006	-	84	68.896	Saimiri_boliviensis_boliviensis
ENSXCOG00000009809	rrs1	83	60.616	ENSSFOG00015015772	rrs1	80	60.900	Scleropages_formosus
ENSXCOG00000009809	rrs1	84	84.746	ENSSMAG00000015226	rrs1	80	84.536	Scophthalmus_maximus
ENSXCOG00000009809	rrs1	89	48.571	ENSSARG00000006976	RRS1	63	64.286	Sorex_araneus
ENSXCOG00000009809	rrs1	95	61.708	ENSSSCG00000006214	RRS1	82	67.893	Sus_scrofa
ENSXCOG00000009809	rrs1	89	78.662	ENSTRUG00000008796	rrs1	87	82.517	Takifugu_rubripes
ENSXCOG00000009809	rrs1	84	81.879	ENSTNIG00000004026	rrs1	88	81.879	Tetraodon_nigroviridis
ENSXCOG00000009809	rrs1	89	67.619	ENSTBEG00000014752	RRS1	82	68.227	Tupaia_belangeri
ENSXCOG00000009809	rrs1	95	66.071	ENSUAMG00000008502	RRS1	82	67.893	Ursus_americanus
ENSXCOG00000009809	rrs1	88	66.881	ENSVVUG00000018452	RRS1	82	67.559	Vulpes_vulpes