EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000009868 (Gene tree)
Gene ID
-
Gene Symbol
zranb1b
Alias
TRABID
Full Name
zinc finger%2C RAN-binding domain containing 1b
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
16155 bases
Position
chrKQ557215.1:17997041-18013195
Accession
ZDB-GENE-061110-94
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000013029zf-RanBPPF00641.186.7e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000013189-2226-ENSXCOP00000013029741 (aa)--
Gene Model
Click here to download ENSXCOG00000009868's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009868's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000009868zranb1b5063.539ENSXCOG00000005663-9861.456
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000009868zranb1b9982.192ENSG00000019995ZRANB19881.233Homo_sapiens
ENSXCOG00000009868zranb1b9982.289ENSAPOG00000005337zranb1a9981.421Acanthochromis_polyacanthus
ENSXCOG00000009868zranb1b9993.724ENSAPOG00000001420ZRANB19994.543Acanthochromis_polyacanthus
ENSXCOG00000009868zranb1b9982.055ENSAMEG00000004155ZRANB19881.096Ailuropoda_melanoleuca
ENSXCOG00000009868zranb1b9990.148ENSACIG00000005436zranb1b9890.257Amphilophus_citrinellus
ENSXCOG00000009868zranb1b9982.970ENSAOCG00000001834zranb1a9982.240Amphiprion_ocellaris
ENSXCOG00000009868zranb1b9991.096ENSAOCG00000004465zranb1b9890.959Amphiprion_ocellaris
ENSXCOG00000009868zranb1b5068.919ENSAPEG00000020565ZRANB19467.568Amphiprion_percula
ENSXCOG00000009868zranb1b10094.467ENSAPEG00000007138zranb1b10094.467Amphiprion_percula
ENSXCOG00000009868zranb1b9993.562ENSATEG00000007705zranb1b9992.800Anabas_testudineus
ENSXCOG00000009868zranb1b9882.490ENSATEG00000001032zranb1a9981.694Anabas_testudineus
ENSXCOG00000009868zranb1b9981.992ENSAPLG00000014747ZRANB19881.037Anas_platyrhynchos
ENSXCOG00000009868zranb1b9982.192ENSACAG00000014485ZRANB19881.233Anolis_carolinensis
ENSXCOG00000009868zranb1b9981.781ENSANAG00000028845ZRANB19780.796Aotus_nancymaae
ENSXCOG00000009868zranb1b9992.213ENSACLG00000017385ZRANB19891.918Astatotilapia_calliptera
ENSXCOG00000009868zranb1b9982.425ENSACLG00000003903zranb1a9981.557Astatotilapia_calliptera
ENSXCOG00000009868zranb1b9980.326ENSAMXG00000008009zranb1b9878.125Astyanax_mexicanus
ENSXCOG00000009868zranb1b9982.192ENSBTAG00000003395ZRANB19881.233Bos_taurus
ENSXCOG00000009868zranb1b9982.192ENSCJAG00000012573ZRANB19581.233Callithrix_jacchus
ENSXCOG00000009868zranb1b9982.104ENSCAFG00000012768ZRANB19581.096Canis_familiaris
ENSXCOG00000009868zranb1b9982.104ENSCAFG00020015397ZRANB19581.096Canis_lupus_dingo
ENSXCOG00000009868zranb1b9982.192ENSCHIG00000023041ZRANB19581.233Capra_hircus
ENSXCOG00000009868zranb1b9982.055ENSTSYG00000000123ZRANB19881.096Carlito_syrichta
ENSXCOG00000009868zranb1b9981.918ENSCPOG00000008391ZRANB19880.959Cavia_porcellus
ENSXCOG00000009868zranb1b7477.960ENSCCAG00000022748ZRANB19976.685Cebus_capucinus
ENSXCOG00000009868zranb1b9982.192ENSCATG00000035796ZRANB19881.233Cercocebus_atys
ENSXCOG00000009868zranb1b9982.055ENSCLAG00000003775ZRANB19881.096Chinchilla_lanigera
ENSXCOG00000009868zranb1b9982.192ENSCSAG00000004507ZRANB19581.233Chlorocebus_sabaeus
ENSXCOG00000009868zranb1b9982.055ENSCPBG00000028065ZRANB19881.096Chrysemys_picta_bellii
ENSXCOG00000009868zranb1b9842.444ENSCING00000013158-9842.993Ciona_intestinalis
ENSXCOG00000009868zranb1b9982.192ENSCANG00000041458ZRANB19781.207Colobus_angolensis_palliatus
ENSXCOG00000009868zranb1b9982.377ENSCGRG00001024189Zranb19581.370Cricetulus_griseus_chok1gshd
ENSXCOG00000009868zranb1b9982.377ENSCGRG00000005680Zranb19581.370Cricetulus_griseus_crigri
ENSXCOG00000009868zranb1b9993.538ENSCSEG00000015297ZRANB19893.288Cynoglossus_semilaevis
ENSXCOG00000009868zranb1b9979.781ENSCSEG00000010830zranb1a9979.726Cynoglossus_semilaevis
ENSXCOG00000009868zranb1b10095.376ENSCVAG00000019593zranb1b10095.376Cyprinodon_variegatus
ENSXCOG00000009868zranb1b9980.027ENSDARG00000063190zranb1b9878.610Danio_rerio
ENSXCOG00000009868zranb1b9975.931ENSDARG00000060257zranb1a9776.006Danio_rerio
ENSXCOG00000009868zranb1b9981.011ENSDNOG00000044807ZRANB19580.000Dasypus_novemcinctus
ENSXCOG00000009868zranb1b9982.055ENSDORG00000010679Zranb19881.096Dipodomys_ordii
ENSXCOG00000009868zranb1b9743.169FBgn0037734trbd9743.383Drosophila_melanogaster
ENSXCOG00000009868zranb1b9981.233ENSETEG00000018124ZRANB19880.137Echinops_telfairi
ENSXCOG00000009868zranb1b9862.363ENSEBUG00000003475zranb1b9762.074Eptatretus_burgeri
ENSXCOG00000009868zranb1b9982.055ENSEASG00005013996ZRANB19881.096Equus_asinus_asinus
ENSXCOG00000009868zranb1b9982.192ENSECAG00000017587ZRANB19581.233Equus_caballus
ENSXCOG00000009868zranb1b9978.289ENSELUG00000015155ZRANB19878.261Esox_lucius
ENSXCOG00000009868zranb1b9982.192ENSFCAG00000002438ZRANB19881.233Felis_catus
ENSXCOG00000009868zranb1b9982.329ENSFALG00000004837ZRANB19881.370Ficedula_albicollis
ENSXCOG00000009868zranb1b9982.055ENSFDAG00000006136ZRANB19881.096Fukomys_damarensis
ENSXCOG00000009868zranb1b9994.158ENSFHEG00000021079zranb1b9994.293Fundulus_heteroclitus
ENSXCOG00000009868zranb1b9970.755ENSFHEG00000011656ZRANB19970.000Fundulus_heteroclitus
ENSXCOG00000009868zranb1b9990.587ENSGMOG00000018270zranb1b9890.177Gadus_morhua
ENSXCOG00000009868zranb1b9982.329ENSGALG00000031474ZRANB19881.370Gallus_gallus
ENSXCOG00000009868zranb1b10097.976ENSGAFG00000011850zranb1b10097.976Gambusia_affinis
ENSXCOG00000009868zranb1b9993.315ENSGACG00000009658zranb1b9993.297Gasterosteus_aculeatus
ENSXCOG00000009868zranb1b9980.189ENSGACG00000002597ZRANB19879.728Gasterosteus_aculeatus
ENSXCOG00000009868zranb1b9981.781ENSGAGG00000024980ZRANB19880.822Gopherus_agassizii
ENSXCOG00000009868zranb1b9982.192ENSGGOG00000016848ZRANB19581.233Gorilla_gorilla
ENSXCOG00000009868zranb1b9982.561ENSHBUG00000019365zranb1a9981.694Haplochromis_burtoni
ENSXCOG00000009868zranb1b9992.350ENSHBUG00000017048ZRANB19892.055Haplochromis_burtoni
ENSXCOG00000009868zranb1b9982.055ENSHGLG00000013127ZRANB19881.233Heterocephalus_glaber_female
ENSXCOG00000009868zranb1b9979.726ENSHGLG00100007253ZRANB19878.904Heterocephalus_glaber_male
ENSXCOG00000009868zranb1b9977.869ENSHCOG00000016378zranb1a9978.005Hippocampus_comes
ENSXCOG00000009868zranb1b9989.623ENSHCOG00000016466ZRANB19988.679Hippocampus_comes
ENSXCOG00000009868zranb1b9978.804ENSIPUG00000000984zranb1b9877.520Ictalurus_punctatus
ENSXCOG00000009868zranb1b9982.603ENSSTOG00000014180ZRANB19881.370Ictidomys_tridecemlineatus
ENSXCOG00000009868zranb1b9982.055ENSJJAG00000009904Zranb19881.096Jaculus_jaculus
ENSXCOG00000009868zranb1b9892.680ENSKMAG00000020697zranb1b9992.403Kryptolebias_marmoratus
ENSXCOG00000009868zranb1b9981.148ENSKMAG00000013496ZRANB19979.726Kryptolebias_marmoratus
ENSXCOG00000009868zranb1b9992.886ENSLBEG00000022522zranb1b9992.267Labrus_bergylta
ENSXCOG00000009868zranb1b9979.428ENSLBEG00000025466zranb1a9978.552Labrus_bergylta
ENSXCOG00000009868zranb1b9982.466ENSLACG00000012712ZRANB19881.370Latimeria_chalumnae
ENSXCOG00000009868zranb1b9984.795ENSLOCG00000007990zranb1b9784.932Lepisosteus_oculatus
ENSXCOG00000009868zranb1b9982.055ENSLAFG00000015221ZRANB19881.096Loxodonta_africana
ENSXCOG00000009868zranb1b9982.192ENSMFAG00000031080ZRANB19781.207Macaca_fascicularis
ENSXCOG00000009868zranb1b9882.207ENSMMUG00000022028ZRANB19981.241Macaca_mulatta
ENSXCOG00000009868zranb1b9982.192ENSMNEG00000030081ZRANB19781.207Macaca_nemestrina
ENSXCOG00000009868zranb1b9982.192ENSMLEG00000039002ZRANB19781.207Mandrillus_leucophaeus
ENSXCOG00000009868zranb1b9993.562ENSMAMG00000017186zranb1b9893.425Mastacembelus_armatus
ENSXCOG00000009868zranb1b9982.425ENSMZEG00005001639zranb1a9981.557Maylandia_zebra
ENSXCOG00000009868zranb1b9992.077ENSMZEG00005027460ZRANB19892.055Maylandia_zebra
ENSXCOG00000009868zranb1b9976.093ENSMAUG00000004316Zranb19875.068Mesocricetus_auratus
ENSXCOG00000009868zranb1b9982.329ENSMICG00000000273ZRANB19881.370Microcebus_murinus
ENSXCOG00000009868zranb1b9982.514ENSMOCG00000013623Zranb19881.507Microtus_ochrogaster
ENSXCOG00000009868zranb1b9892.730ENSMMOG00000008203zranb1b9992.740Mola_mola
ENSXCOG00000009868zranb1b9982.153ENSMMOG00000013723zranb1a9981.284Mola_mola
ENSXCOG00000009868zranb1b9982.787ENSMODG00000010224ZRANB19481.644Monodelphis_domestica
ENSXCOG00000009868zranb1b9992.896ENSMALG00000018259zranb1b9892.740Monopterus_albus
ENSXCOG00000009868zranb1b9982.466MGP_CAROLIEiJ_G0030583Zranb19581.233Mus_caroli
ENSXCOG00000009868zranb1b9982.466ENSMUSG00000030967Zranb19881.233Mus_musculus
ENSXCOG00000009868zranb1b9982.329MGP_PahariEiJ_G0013790Zranb19881.096Mus_pahari
ENSXCOG00000009868zranb1b9982.466MGP_SPRETEiJ_G0031697Zranb19581.233Mus_spretus
ENSXCOG00000009868zranb1b9982.192ENSMPUG00000002701ZRANB19581.233Mustela_putorius_furo
ENSXCOG00000009868zranb1b9981.096ENSMLUG00000000711ZRANB19880.000Myotis_lucifugus
ENSXCOG00000009868zranb1b9982.104ENSNGAG00000023760Zranb19881.233Nannospalax_galili
ENSXCOG00000009868zranb1b9982.561ENSNBRG00000013030zranb1a9681.694Neolamprologus_brichardi
ENSXCOG00000009868zranb1b9093.134ENSNBRG00000016218ZRANB19693.134Neolamprologus_brichardi
ENSXCOG00000009868zranb1b9981.918ENSNLEG00000000584ZRANB19980.966Nomascus_leucogenys
ENSXCOG00000009868zranb1b9982.923ENSMEUG00000004252ZRANB19881.644Notamacropus_eugenii
ENSXCOG00000009868zranb1b9975.000ENSOPRG00000015594-9873.973Ochotona_princeps
ENSXCOG00000009868zranb1b9981.967ENSODEG00000017463ZRANB19880.959Octodon_degus
ENSXCOG00000009868zranb1b9993.014ENSONIG00000000515ZRANB19893.014Oreochromis_niloticus
ENSXCOG00000009868zranb1b9982.561ENSONIG00000016016zranb1a9781.694Oreochromis_niloticus
ENSXCOG00000009868zranb1b9978.668ENSOCUG00000007071ZRANB19277.384Oryctolagus_cuniculus
ENSXCOG00000009868zranb1b9979.754ENSORLG00000009697zranb1a9879.754Oryzias_latipes
ENSXCOG00000009868zranb1b9990.897ENSORLG00000005663zranb1b9991.031Oryzias_latipes
ENSXCOG00000009868zranb1b9990.763ENSORLG00020009424zranb1b9990.897Oryzias_latipes_hni
ENSXCOG00000009868zranb1b9979.754ENSORLG00020005936ZRANB19879.754Oryzias_latipes_hni
ENSXCOG00000009868zranb1b9979.617ENSORLG00015005231ZRANB19979.617Oryzias_latipes_hsok
ENSXCOG00000009868zranb1b9991.031ENSORLG00015014410zranb1b9991.165Oryzias_latipes_hsok
ENSXCOG00000009868zranb1b9992.236ENSOMEG00000000652ZRANB19992.102Oryzias_melastigma
ENSXCOG00000009868zranb1b9979.891ENSOMEG00000010975zranb1a9979.891Oryzias_melastigma
ENSXCOG00000009868zranb1b9982.128ENSOGAG00000008345ZRANB19881.122Otolemur_garnettii
ENSXCOG00000009868zranb1b9982.079ENSOARG00000010740ZRANB19581.122Ovis_aries
ENSXCOG00000009868zranb1b9982.329ENSPPAG00000036455ZRANB19581.370Pan_paniscus
ENSXCOG00000009868zranb1b9982.466ENSPPRG00000017274ZRANB19881.233Panthera_pardus
ENSXCOG00000009868zranb1b9781.869ENSPTIG00000018595ZRANB19780.614Panthera_tigris_altaica
ENSXCOG00000009868zranb1b9982.329ENSPTRG00000003034ZRANB19581.370Pan_troglodytes
ENSXCOG00000009868zranb1b9982.192ENSPANG00000020320ZRANB19781.207Papio_anubis
ENSXCOG00000009868zranb1b9982.401ENSPKIG00000003627ZRANB19482.216Paramormyrops_kingsleyae
ENSXCOG00000009868zranb1b9991.233ENSPMGG00000014814zranb1b9890.137Periophthalmus_magnuspinnatus
ENSXCOG00000009868zranb1b9968.200ENSPMGG00000004770-9967.813Periophthalmus_magnuspinnatus
ENSXCOG00000009868zranb1b9981.386ENSPEMG00000021601-9880.518Peromyscus_maniculatus_bairdii
ENSXCOG00000009868zranb1b9983.014ENSPCIG00000023095ZRANB19881.781Phascolarctos_cinereus
ENSXCOG00000009868zranb1b10097.059ENSPFOG00000017835zranb1b10097.059Poecilia_formosa
ENSXCOG00000009868zranb1b10094.323ENSPLAG00000014945zranb1b10094.323Poecilia_latipinna
ENSXCOG00000009868zranb1b10098.381ENSPMEG00000011255zranb1b10098.381Poecilia_mexicana
ENSXCOG00000009868zranb1b10097.976ENSPREG00000011524zranb1b10097.976Poecilia_reticulata
ENSXCOG00000009868zranb1b9982.192ENSPPYG00000002745ZRANB19581.233Pongo_abelii
ENSXCOG00000009868zranb1b9079.821ENSPCAG00000006314ZRANB110078.625Procavia_capensis
ENSXCOG00000009868zranb1b9979.512ENSPCOG00000020131ZRANB19878.533Propithecus_coquereli
ENSXCOG00000009868zranb1b9081.315ENSPVAG00000017928ZRANB110080.269Pteropus_vampyrus
ENSXCOG00000009868zranb1b10092.173ENSPNYG00000004021ZRANB19992.173Pundamilia_nyererei
ENSXCOG00000009868zranb1b9982.425ENSPNYG00000001475zranb1a9981.557Pundamilia_nyererei
ENSXCOG00000009868zranb1b9982.128ENSPNAG00000014798-9881.669Pygocentrus_nattereri
ENSXCOG00000009868zranb1b9980.571ENSPNAG00000008717zranb1b9879.292Pygocentrus_nattereri
ENSXCOG00000009868zranb1b9982.466ENSRNOG00000017294Zranb19581.233Rattus_norvegicus
ENSXCOG00000009868zranb1b9978.933ENSRBIG00000012257ZRANB19577.975Rhinopithecus_bieti
ENSXCOG00000009868zranb1b9982.192ENSRROG00000039732ZRANB19581.233Rhinopithecus_roxellana
ENSXCOG00000009868zranb1b9982.192ENSSBOG00000034635ZRANB19581.233Saimiri_boliviensis_boliviensis
ENSXCOG00000009868zranb1b9982.650ENSSHAG00000005534ZRANB19881.644Sarcophilus_harrisii
ENSXCOG00000009868zranb1b9978.378ENSSFOG00015009991ZRANB19178.019Scleropages_formosus
ENSXCOG00000009868zranb1b9984.110ENSSFOG00015008836zranb19884.110Scleropages_formosus
ENSXCOG00000009868zranb1b9981.557ENSSMAG00000002965zranb1a9981.096Scophthalmus_maximus
ENSXCOG00000009868zranb1b9982.834ENSSDUG00000018599zranb1a9981.967Seriola_dumerili
ENSXCOG00000009868zranb1b9994.809ENSSDUG00000016090ZRANB19994.658Seriola_dumerili
ENSXCOG00000009868zranb1b9994.422ENSSLDG00000016768ZRANB19993.588Seriola_lalandi_dorsalis
ENSXCOG00000009868zranb1b9983.106ENSSLDG00000024682zranb1a9682.240Seriola_lalandi_dorsalis
ENSXCOG00000009868zranb1b9982.740ENSSPUG00000012970ZRANB19881.644Sphenodon_punctatus
ENSXCOG00000009868zranb1b10094.602ENSSPAG00000011464ZRANB110094.602Stegastes_partitus
ENSXCOG00000009868zranb1b9982.561ENSSPAG00000015578zranb1a9981.831Stegastes_partitus
ENSXCOG00000009868zranb1b9982.329ENSSSCG00000010738ZRANB19881.370Sus_scrofa
ENSXCOG00000009868zranb1b9982.466ENSTGUG00000011458ZRANB19881.507Taeniopygia_guttata
ENSXCOG00000009868zranb1b9980.381ENSTRUG00000009736ZRANB19979.645Takifugu_rubripes
ENSXCOG00000009868zranb1b9994.679ENSTRUG00000001497zranb1b9994.795Takifugu_rubripes
ENSXCOG00000009868zranb1b9982.192ENSTTRG00000012645ZRANB19881.233Tursiops_truncatus
ENSXCOG00000009868zranb1b9982.055ENSUAMG00000015841ZRANB19881.096Ursus_americanus
ENSXCOG00000009868zranb1b9979.041ENSUMAG00000005395ZRANB19578.082Ursus_maritimus
ENSXCOG00000009868zranb1b9073.991ENSVPAG00000010654ZRANB110072.945Vicugna_pacos
ENSXCOG00000009868zranb1b9982.104ENSVVUG00000005988ZRANB19581.096Vulpes_vulpes
ENSXCOG00000009868zranb1b9981.421ENSXETG00000023629zranb19880.411Xenopus_tropicalis
ENSXCOG00000009868zranb1b10096.761ENSXMAG00000012557zranb1b10096.761Xiphophorus_maculatus

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