EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSXCOG00000009899 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Xiphophorus_couchianus
Status
putative
Strand
Minus strand
Length
38461 bases
Position
chrKQ557203.1:5551663-5590123
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSXCOP00000013093tRNA_anti-codonPF01336.251.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSXCOT00000013253-1665-ENSXCOP00000013093554 (aa)--
ENSXCOT00000013252-1647-ENSXCOP00000013092548 (aa)--
ENSXCOT00000013254-1653-ENSXCOP00000013094550 (aa)--
Gene Model
Click here to download ENSXCOG00000009899's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000009899's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSXCOG00000009899-9461.266ENSXCOG00000010068rpa19361.080
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSXCOG00000009899-9982.172ENSAPOG00000019409RPA19482.172Acanthochromis_polyacanthus
ENSXCOG00000009899-9962.657ENSAPOG00000011658rpa19962.657Acanthochromis_polyacanthus
ENSXCOG00000009899-9856.076ENSAMEG00000007706RPA19356.076Ailuropoda_melanoleuca
ENSXCOG00000009899-9954.799ENSACIG00000007277rpa19954.799Amphilophus_citrinellus
ENSXCOG00000009899-9975.597ENSACIG00000012881RPA19975.597Amphilophus_citrinellus
ENSXCOG00000009899-9962.872ENSAOCG00000023376rpa19962.857Amphiprion_ocellaris
ENSXCOG00000009899-9971.774ENSAOCG00000009003RPA19672.419Amphiprion_ocellaris
ENSXCOG00000009899-9969.921ENSAPEG00000019132RPA19671.339Amphiprion_percula
ENSXCOG00000009899-9962.857ENSAPEG00000008634rpa19962.857Amphiprion_percula
ENSXCOG00000009899-9970.418ENSATEG00000006443RPA19670.418Anabas_testudineus
ENSXCOG00000009899-9962.679ENSATEG00000022024rpa19962.679Anabas_testudineus
ENSXCOG00000009899-9955.505ENSAPLG00000012442RPA18955.505Anas_platyrhynchos
ENSXCOG00000009899-10052.539ENSACAG00000014490RPA19552.715Anolis_carolinensis
ENSXCOG00000009899-9958.633ENSANAG00000023456RPA19758.633Aotus_nancymaae
ENSXCOG00000009899-10071.895ENSACLG00000005223RPA19671.895Astatotilapia_calliptera
ENSXCOG00000009899-9864.568ENSACLG00000006640rpa19964.568Astatotilapia_calliptera
ENSXCOG00000009899-9963.718ENSAMXG00000008418rpa19963.718Astyanax_mexicanus
ENSXCOG00000009899-9955.688ENSBTAG00000009711RPA19555.688Bos_taurus
ENSXCOG00000009899-8031.696WBGene00017546rpa-16731.696Caenorhabditis_elegans
ENSXCOG00000009899-9955.631ENSCJAG00000001848RPA19556.314Callithrix_jacchus
ENSXCOG00000009899-9956.239ENSCAFG00000019249RPA19556.410Canis_familiaris
ENSXCOG00000009899-9956.239ENSCAFG00020009847RPA19556.410Canis_lupus_dingo
ENSXCOG00000009899-9955.973ENSCHIG00000026308RPA19556.102Capra_hircus
ENSXCOG00000009899-9955.461ENSTSYG00000003482-9555.461Carlito_syrichta
ENSXCOG00000009899-9955.973ENSCPOG00000000035RPA19555.973Cavia_porcellus
ENSXCOG00000009899-9946.520ENSCCAG00000010981RPA19447.368Cebus_capucinus
ENSXCOG00000009899-9956.143ENSCLAG00000005185-9556.143Chinchilla_lanigera
ENSXCOG00000009899-9952.991ENSCLAG00000015045-9552.991Chinchilla_lanigera
ENSXCOG00000009899-9946.271ENSCSAG00000013833RPA19446.350Chlorocebus_sabaeus
ENSXCOG00000009899-7864.220ENSCHOG00000009454-9964.220Choloepus_hoffmanni
ENSXCOG00000009899-9955.385ENSCHOG00000013540-9955.385Choloepus_hoffmanni
ENSXCOG00000009899-9957.534ENSCPBG00000020377RPA19957.746Chrysemys_picta_bellii
ENSXCOG00000009899-9941.391ENSCING00000023482-9441.391Ciona_intestinalis
ENSXCOG00000009899-9957.914ENSCANG00000030911RPA19757.914Colobus_angolensis_palliatus
ENSXCOG00000009899-9955.143ENSCGRG00001008197Rpa19555.612Cricetulus_griseus_chok1gshd
ENSXCOG00000009899-8759.465ENSCGRG00000000582Rpa19459.465Cricetulus_griseus_crigri
ENSXCOG00000009899-9963.773ENSCSEG00000012726RPA19964.444Cynoglossus_semilaevis
ENSXCOG00000009899-9960.885ENSCSEG00000013066rpa19760.885Cynoglossus_semilaevis
ENSXCOG00000009899-9672.771ENSCVAG00000013446-9272.447Cyprinodon_variegatus
ENSXCOG00000009899-9960.727ENSCVAG00000019431rpa19962.274Cyprinodon_variegatus
ENSXCOG00000009899-9962.087ENSDARG00000003938rpa19562.087Danio_rerio
ENSXCOG00000009899-9956.068ENSDNOG00000017218RPA19556.068Dasypus_novemcinctus
ENSXCOG00000009899-9957.094ENSDORG00000006199Rpa19756.876Dipodomys_ordii
ENSXCOG00000009899-9938.957FBgn0010173RpA-709439.130Drosophila_melanogaster
ENSXCOG00000009899-8062.887ENSETEG00000017608RPA17662.887Echinops_telfairi
ENSXCOG00000009899-9958.094ENSEASG00005009372RPA19957.971Equus_asinus_asinus
ENSXCOG00000009899-9956.293ENSECAG00000023886RPA19556.293Equus_caballus
ENSXCOG00000009899-7564.115ENSEEUG00000002186-6864.115Erinaceus_europaeus
ENSXCOG00000009899-9261.776ENSELUG00000006136RPA19962.500Esox_lucius
ENSXCOG00000009899-9961.217ENSELUG00000021071rpa19561.217Esox_lucius
ENSXCOG00000009899-9956.485ENSFCAG00000006306RPA19556.485Felis_catus
ENSXCOG00000009899-9954.966ENSFALG00000006575RPA19554.966Ficedula_albicollis
ENSXCOG00000009899-10056.218ENSFDAG00000007720RPA19556.218Fukomys_damarensis
ENSXCOG00000009899-9960.517ENSFHEG00000003580rpa19560.517Fundulus_heteroclitus
ENSXCOG00000009899-9961.279ENSGMOG00000010382rpa19562.298Gadus_morhua
ENSXCOG00000009899-9955.575ENSGALG00000003072RPA19555.575Gallus_gallus
ENSXCOG00000009899-10082.297ENSGAFG00000020953RPA19683.732Gambusia_affinis
ENSXCOG00000009899-9961.905ENSGAFG00000012916rpa19661.905Gambusia_affinis
ENSXCOG00000009899-9961.319ENSGACG00000010856rpa19561.319Gasterosteus_aculeatus
ENSXCOG00000009899-9957.363ENSGAGG00000013611RPA19557.363Gopherus_agassizii
ENSXCOG00000009899-9958.273ENSGGOG00000014186RPA19558.273Gorilla_gorilla
ENSXCOG00000009899-10066.372ENSHBUG00000009348RPA19866.372Haplochromis_burtoni
ENSXCOG00000009899-9963.668ENSHBUG00000017773rpa19563.668Haplochromis_burtoni
ENSXCOG00000009899-9956.655ENSHGLG00000008846RPA19556.143Heterocephalus_glaber_female
ENSXCOG00000009899-9852.083ENSHGLG00100000799-9352.083Heterocephalus_glaber_male
ENSXCOG00000009899-9849.291ENSHGLG00100002005-9349.291Heterocephalus_glaber_male
ENSXCOG00000009899-9956.655ENSHGLG00100017755-9556.143Heterocephalus_glaber_male
ENSXCOG00000009899-7966.059ENSHCOG00000001401rpa19557.633Hippocampus_comes
ENSXCOG00000009899-9951.268ENSHCOG00000000351RPA19351.268Hippocampus_comes
ENSXCOG00000009899-9961.352ENSIPUG00000004400rpa19561.179Ictalurus_punctatus
ENSXCOG00000009899-9953.912ENSSTOG00000022475RPA19853.912Ictidomys_tridecemlineatus
ENSXCOG00000009899-9956.581ENSJJAG00000000876Rpa19856.581Jaculus_jaculus
ENSXCOG00000009899-10073.935ENSKMAG00000000234RPA19573.935Kryptolebias_marmoratus
ENSXCOG00000009899-9959.450ENSKMAG00000005605rpa19559.520Kryptolebias_marmoratus
ENSXCOG00000009899-9962.433ENSLBEG00000021604rpa19562.433Labrus_bergylta
ENSXCOG00000009899-9977.800ENSLBEG00000002281RPA19777.800Labrus_bergylta
ENSXCOG00000009899-8655.624ENSLACG00000007210RPA19855.624Latimeria_chalumnae
ENSXCOG00000009899-9960.208ENSLOCG00000006397rpa19560.208Lepisosteus_oculatus
ENSXCOG00000009899-9955.724ENSLAFG00000015354RPA19555.724Loxodonta_africana
ENSXCOG00000009899-8255.102ENSMFAG00000036138-9655.215Macaca_fascicularis
ENSXCOG00000009899-9853.108ENSMMUG00000002442-9353.108Macaca_mulatta
ENSXCOG00000009899-9955.707ENSMMUG00000011604-9755.802Macaca_mulatta
ENSXCOG00000009899-9853.285ENSMNEG00000029837-9353.285Macaca_nemestrina
ENSXCOG00000009899-9955.537ENSMNEG00000031632-9855.631Macaca_nemestrina
ENSXCOG00000009899-9954.160ENSMLEG00000038768-9754.422Mandrillus_leucophaeus
ENSXCOG00000009899-9968.429ENSMAMG00000020097RPA19668.429Mastacembelus_armatus
ENSXCOG00000009899-9962.909ENSMAMG00000017993rpa19962.909Mastacembelus_armatus
ENSXCOG00000009899-10071.895ENSMZEG00005024731RPA19671.895Maylandia_zebra
ENSXCOG00000009899-9962.892ENSMZEG00005007551rpa19960.696Maylandia_zebra
ENSXCOG00000009899-9955.575ENSMGAG00000005315RPA19555.575Meleagris_gallopavo
ENSXCOG00000009899-9955.993ENSMAUG00000010474Rpa19756.432Mesocricetus_auratus
ENSXCOG00000009899-9955.631ENSMICG00000012867RPA19555.631Microcebus_murinus
ENSXCOG00000009899-9955.575ENSMOCG00000013019Rpa19555.575Microtus_ochrogaster
ENSXCOG00000009899-9961.431ENSMMOG00000014292rpa19861.431Mola_mola
ENSXCOG00000009899-9972.663ENSMMOG00000010868RPA19572.663Mola_mola
ENSXCOG00000009899-9956.678ENSMODG00000010549RPA19556.678Monodelphis_domestica
ENSXCOG00000009899-9961.754ENSMALG00000011453rpa19561.754Monopterus_albus
ENSXCOG00000009899-9979.918ENSMALG00000001208RPA19279.918Monopterus_albus
ENSXCOG00000009899-9955.008MGP_CAROLIEiJ_G0016734Rpa19555.008Mus_caroli
ENSXCOG00000009899-9955.236ENSMUSG00000000751Rpa19555.236Mus_musculus
ENSXCOG00000009899-9955.857MGP_PahariEiJ_G0017871Rpa19555.857Mus_pahari
ENSXCOG00000009899-9955.312MGP_SPRETEiJ_G0017577Rpa19554.975Mus_spretus
ENSXCOG00000009899-9856.174ENSMPUG00000013119RPA19356.174Mustela_putorius_furo
ENSXCOG00000009899-9956.239ENSMLUG00000006113RPA19456.239Myotis_lucifugus
ENSXCOG00000009899-9956.655ENSNGAG00000004522Rpa19356.655Nannospalax_galili
ENSXCOG00000009899-9963.929ENSNBRG00000020595rpa19963.929Neolamprologus_brichardi
ENSXCOG00000009899-9971.254ENSNBRG00000009672RPA19471.254Neolamprologus_brichardi
ENSXCOG00000009899-9955.707ENSNLEG00000017149RPA19555.802Nomascus_leucogenys
ENSXCOG00000009899-9948.199ENSMEUG00000006714RPA19648.199Notamacropus_eugenii
ENSXCOG00000009899-9955.892ENSODEG00000009038RPA19655.892Octodon_degus
ENSXCOG00000009899-9961.604ENSONIG00000013135rpa19561.604Oreochromis_niloticus
ENSXCOG00000009899-9956.293ENSOANG00000010880RPA19756.463Ornithorhynchus_anatinus
ENSXCOG00000009899-9952.657ENSOCUG00000001504RPA19552.657Oryctolagus_cuniculus
ENSXCOG00000009899-9970.111ENSORLG00000003368RPA19670.111Oryzias_latipes
ENSXCOG00000009899-9962.697ENSORLG00000004856rpa19562.697Oryzias_latipes
ENSXCOG00000009899-9962.697ENSORLG00020008980rpa19562.697Oryzias_latipes_hni
ENSXCOG00000009899-9968.955ENSORLG00020015284RPA19668.799Oryzias_latipes_hni
ENSXCOG00000009899-7882.258ENSORLG00015005867-9982.258Oryzias_latipes_hsok
ENSXCOG00000009899-9962.697ENSORLG00015013982rpa19562.697Oryzias_latipes_hsok
ENSXCOG00000009899-9971.475ENSORLG00015020383RPA19571.475Oryzias_latipes_hsok
ENSXCOG00000009899-9960.140ENSOMEG00000004704rpa19560.140Oryzias_melastigma
ENSXCOG00000009899-9971.979ENSOMEG00000011040RPA19971.979Oryzias_melastigma
ENSXCOG00000009899-9957.094ENSOGAG00000005581-9557.094Otolemur_garnettii
ENSXCOG00000009899-7366.292ENSOGAG00000029379-9266.292Otolemur_garnettii
ENSXCOG00000009899-9955.802ENSOARG00000014479RPA19555.688Ovis_aries
ENSXCOG00000009899-9956.314ENSPPAG00000039680RPA19556.485Pan_paniscus
ENSXCOG00000009899-9956.826ENSPPRG00000011807RPA19556.826Panthera_pardus
ENSXCOG00000009899-9956.655ENSPTIG00000007898RPA19556.655Panthera_tigris_altaica
ENSXCOG00000009899-9956.314ENSPTRG00000008539RPA19556.485Pan_troglodytes
ENSXCOG00000009899-9955.877ENSPANG00000024592RPA19555.973Papio_anubis
ENSXCOG00000009899-9360.741ENSPKIG00000008053rpa18860.623Paramormyrops_kingsleyae
ENSXCOG00000009899-9955.479ENSPSIG00000015617RPA19755.479Pelodiscus_sinensis
ENSXCOG00000009899-9970.217ENSPMGG00000000543RPA19969.659Periophthalmus_magnuspinnatus
ENSXCOG00000009899-10062.943ENSPMGG00000011589rpa19862.943Periophthalmus_magnuspinnatus
ENSXCOG00000009899-9956.432ENSPEMG00000021061Rpa19556.432Peromyscus_maniculatus_bairdii
ENSXCOG00000009899-9955.897ENSPCIG00000019049RPA19556.410Phascolarctos_cinereus
ENSXCOG00000009899-9961.257ENSPFOG00000003987rpa19561.257Poecilia_formosa
ENSXCOG00000009899-9961.431ENSPLAG00000004984rpa19561.431Poecilia_latipinna
ENSXCOG00000009899-9482.683ENSPLAG00000008844-9282.852Poecilia_latipinna
ENSXCOG00000009899-9480.985ENSPMEG00000003627-9282.003Poecilia_mexicana
ENSXCOG00000009899-9961.257ENSPMEG00000020602rpa19961.360Poecilia_mexicana
ENSXCOG00000009899-9755.296ENSPREG00000010174rpa19555.117Poecilia_reticulata
ENSXCOG00000009899-10080.062ENSPREG00000010119RPA19680.805Poecilia_reticulata
ENSXCOG00000009899-9956.261ENSPCOG00000001799RPA19556.261Propithecus_coquereli
ENSXCOG00000009899-9955.726ENSPVAG00000002149RPA19555.726Pteropus_vampyrus
ENSXCOG00000009899-10072.059ENSPNYG00000024165RPA19672.059Pundamilia_nyererei
ENSXCOG00000009899-9864.568ENSPNYG00000016316rpa19964.568Pundamilia_nyererei
ENSXCOG00000009899-9954.577ENSPNAG00000008599rpa19654.912Pygocentrus_nattereri
ENSXCOG00000009899-9960.680ENSRNOG00000003123Rpa19555.461Rattus_norvegicus
ENSXCOG00000009899-9955.802ENSRBIG00000036587RPA19555.802Rhinopithecus_bieti
ENSXCOG00000009899-9952.389ENSRROG00000043278RPA19552.389Rhinopithecus_roxellana
ENSXCOG00000009899-8235.546YAR007CRFA17535.546Saccharomyces_cerevisiae
ENSXCOG00000009899-9556.071ENSSBOG00000030233RPA19756.607Saimiri_boliviensis_boliviensis
ENSXCOG00000009899-9956.655ENSSHAG00000007969RPA19456.997Sarcophilus_harrisii
ENSXCOG00000009899-9963.700ENSSFOG00015005362rpa18863.700Scleropages_formosus
ENSXCOG00000009899-9969.462ENSSMAG00000019746RPA19669.462Scophthalmus_maximus
ENSXCOG00000009899-9963.233ENSSDUG00000011949rpa19563.233Seriola_dumerili
ENSXCOG00000009899-9968.510ENSSDUG00000016358RPA19668.664Seriola_dumerili
ENSXCOG00000009899-9962.877ENSSLDG00000011806rpa19562.877Seriola_lalandi_dorsalis
ENSXCOG00000009899-9967.530ENSSLDG00000020784RPA19667.835Seriola_lalandi_dorsalis
ENSXCOG00000009899-8250.103ENSSARG00000007506RPA18150.103Sorex_araneus
ENSXCOG00000009899-9953.701ENSSPUG00000007223RPA19753.701Sphenodon_punctatus
ENSXCOG00000009899-9961.996ENSSPAG00000009903rpa19561.996Stegastes_partitus
ENSXCOG00000009899-9976.720ENSSPAG00000011165RPA19775.923Stegastes_partitus
ENSXCOG00000009899-9957.914ENSSSCG00000017822RPA19557.914Sus_scrofa
ENSXCOG00000009899-9954.983ENSTGUG00000005775RPA19554.983Taeniopygia_guttata
ENSXCOG00000009899-9971.780ENSTRUG00000000405RPA19475.252Takifugu_rubripes
ENSXCOG00000009899-9962.653ENSTRUG00000003616rpa19562.653Takifugu_rubripes
ENSXCOG00000009899-9960.788ENSTNIG00000016199rpa19560.997Tetraodon_nigroviridis
ENSXCOG00000009899-7964.920ENSTBEG00000002709RPA17364.920Tupaia_belangeri
ENSXCOG00000009899-9955.214ENSTTRG00000001169RPA19555.385Tursiops_truncatus
ENSXCOG00000009899-8767.308ENSUAMG00000015676RPA19367.308Ursus_americanus
ENSXCOG00000009899-9857.875ENSUMAG00000009328RPA19357.875Ursus_maritimus
ENSXCOG00000009899-9954.530ENSVPAG00000009443RPA19554.530Vicugna_pacos
ENSXCOG00000009899-9956.068ENSVVUG00000021715RPA19556.239Vulpes_vulpes
ENSXCOG00000009899-9957.659ENSXETG00000013538rpa19557.886Xenopus_tropicalis
ENSXCOG00000009899-9961.431ENSXMAG00000004102rpa19961.828Xiphophorus_maculatus
ENSXCOG00000009899-10099.182ENSXMAG00000010333RPA19399.182Xiphophorus_maculatus

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