EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000010150 (Gene tree)
Gene ID: -
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase%2C CCA-adding%2C 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 12317 bases
Position: chrKQ557213.1:2804540-2816856
Accession: ZDB-GENE-040625-176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000013393	PolyA_pol	PF01743.20	2.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000013558	-	1278	-	ENSXCOP00000013393	425 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010150's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010150	trnt1	99	67.612	ENSG00000072756	TRNT1	96	67.612	Homo_sapiens
ENSXCOG00000010150	trnt1	99	82.118	ENSAPOG00000013687	trnt1	99	82.118	Acanthochromis_polyacanthus
ENSXCOG00000010150	trnt1	96	68.382	ENSAMEG00000014520	TRNT1	94	68.382	Ailuropoda_melanoleuca
ENSXCOG00000010150	trnt1	99	83.765	ENSACIG00000021706	trnt1	99	83.765	Amphilophus_citrinellus
ENSXCOG00000010150	trnt1	99	84.272	ENSAOCG00000024612	trnt1	99	84.272	Amphiprion_ocellaris
ENSXCOG00000010150	trnt1	96	76.886	ENSAPEG00000022627	trnt1	95	76.886	Amphiprion_percula
ENSXCOG00000010150	trnt1	95	85.856	ENSATEG00000008928	trnt1	99	85.856	Anabas_testudineus
ENSXCOG00000010150	trnt1	90	72.063	ENSAPLG00000004258	TRNT1	95	72.063	Anas_platyrhynchos
ENSXCOG00000010150	trnt1	96	67.237	ENSACAG00000005657	TRNT1	93	67.237	Anolis_carolinensis
ENSXCOG00000010150	trnt1	96	68.966	ENSANAG00000024802	TRNT1	94	68.966	Aotus_nancymaae
ENSXCOG00000010150	trnt1	100	81.499	ENSACLG00000022227	trnt1	100	81.499	Astatotilapia_calliptera
ENSXCOG00000010150	trnt1	99	76.869	ENSAMXG00000003960	trnt1	99	76.869	Astyanax_mexicanus
ENSXCOG00000010150	trnt1	99	65.485	ENSBTAG00000019534	TRNT1	96	65.485	Bos_taurus
ENSXCOG00000010150	trnt1	95	43.133	WBGene00010089	hpo-31	94	43.133	Caenorhabditis_elegans
ENSXCOG00000010150	trnt1	96	69.212	ENSCJAG00000015466	TRNT1	94	69.212	Callithrix_jacchus
ENSXCOG00000010150	trnt1	96	68.966	ENSCAFG00000005985	TRNT1	93	68.966	Canis_familiaris
ENSXCOG00000010150	trnt1	96	68.966	ENSCAFG00020014746	TRNT1	93	68.966	Canis_lupus_dingo
ENSXCOG00000010150	trnt1	99	66.903	ENSCHIG00000007030	TRNT1	95	66.903	Capra_hircus
ENSXCOG00000010150	trnt1	96	69.951	ENSTSYG00000013390	TRNT1	94	69.951	Carlito_syrichta
ENSXCOG00000010150	trnt1	89	54.377	ENSCAPG00000006891	TRNT1	99	54.111	Cavia_aperea
ENSXCOG00000010150	trnt1	99	65.957	ENSCPOG00000007849	TRNT1	96	65.957	Cavia_porcellus
ENSXCOG00000010150	trnt1	96	67.805	ENSCCAG00000002919	TRNT1	99	67.805	Cebus_capucinus
ENSXCOG00000010150	trnt1	96	69.951	ENSCATG00000031985	TRNT1	92	69.951	Cercocebus_atys
ENSXCOG00000010150	trnt1	96	68.382	ENSCLAG00000005186	TRNT1	84	79.330	Chinchilla_lanigera
ENSXCOG00000010150	trnt1	96	69.951	ENSCSAG00000011052	TRNT1	94	69.951	Chlorocebus_sabaeus
ENSXCOG00000010150	trnt1	80	78.977	ENSCHOG00000005712	TRNT1	78	78.977	Choloepus_hoffmanni
ENSXCOG00000010150	trnt1	96	70.588	ENSCPBG00000017636	TRNT1	93	70.588	Chrysemys_picta_bellii
ENSXCOG00000010150	trnt1	95	40.247	ENSCING00000007069	-	99	40.247	Ciona_intestinalis
ENSXCOG00000010150	trnt1	95	41.626	ENSCSAVG00000007494	-	95	41.626	Ciona_savignyi
ENSXCOG00000010150	trnt1	96	70.197	ENSCANG00000039030	TRNT1	94	70.197	Colobus_angolensis_palliatus
ENSXCOG00000010150	trnt1	96	69.363	ENSCGRG00001009998	Trnt1	94	69.363	Cricetulus_griseus_chok1gshd
ENSXCOG00000010150	trnt1	96	69.363	ENSCGRG00000013410	Trnt1	86	79.121	Cricetulus_griseus_crigri
ENSXCOG00000010150	trnt1	100	79.577	ENSCSEG00000008157	trnt1	100	79.577	Cynoglossus_semilaevis
ENSXCOG00000010150	trnt1	99	87.736	ENSCVAG00000019770	trnt1	99	87.736	Cyprinodon_variegatus
ENSXCOG00000010150	trnt1	99	77.934	ENSDARG00000075297	trnt1	99	77.934	Danio_rerio
ENSXCOG00000010150	trnt1	96	70.343	ENSDNOG00000008837	TRNT1	94	70.343	Dasypus_novemcinctus
ENSXCOG00000010150	trnt1	96	68.873	ENSDORG00000014035	Trnt1	94	68.873	Dipodomys_ordii
ENSXCOG00000010150	trnt1	94	49.010	FBgn0037369	CG2100	83	49.010	Drosophila_melanogaster
ENSXCOG00000010150	trnt1	57	74.689	ENSETEG00000018177	TRNT1	97	74.689	Echinops_telfairi
ENSXCOG00000010150	trnt1	99	61.702	ENSEBUG00000012779	-	99	61.702	Eptatretus_burgeri
ENSXCOG00000010150	trnt1	96	70.197	ENSEASG00005003577	TRNT1	94	70.197	Equus_asinus_asinus
ENSXCOG00000010150	trnt1	96	70.443	ENSECAG00000014420	TRNT1	94	70.443	Equus_caballus
ENSXCOG00000010150	trnt1	99	67.612	ENSEEUG00000009567	TRNT1	97	67.612	Erinaceus_europaeus
ENSXCOG00000010150	trnt1	99	78.923	ENSELUG00000003802	trnt1	99	78.923	Esox_lucius
ENSXCOG00000010150	trnt1	96	68.966	ENSFCAG00000026805	TRNT1	93	68.966	Felis_catus
ENSXCOG00000010150	trnt1	90	71.802	ENSFALG00000013539	TRNT1	99	71.802	Ficedula_albicollis
ENSXCOG00000010150	trnt1	99	66.194	ENSFDAG00000018412	TRNT1	96	66.194	Fukomys_damarensis
ENSXCOG00000010150	trnt1	99	87.972	ENSFHEG00000019294	trnt1	99	87.972	Fundulus_heteroclitus
ENSXCOG00000010150	trnt1	99	78.404	ENSGMOG00000007460	trnt1	100	78.404	Gadus_morhua
ENSXCOG00000010150	trnt1	99	67.062	ENSGALG00000017368	TRNT1	97	67.062	Gallus_gallus
ENSXCOG00000010150	trnt1	100	96.235	ENSGAFG00000008647	trnt1	100	96.235	Gambusia_affinis
ENSXCOG00000010150	trnt1	99	81.455	ENSGACG00000011903	trnt1	99	81.455	Gasterosteus_aculeatus
ENSXCOG00000010150	trnt1	96	71.569	ENSGAGG00000020942	TRNT1	93	71.569	Gopherus_agassizii
ENSXCOG00000010150	trnt1	96	69.704	ENSGGOG00000015286	TRNT1	94	69.704	Gorilla_gorilla
ENSXCOG00000010150	trnt1	100	81.733	ENSHBUG00000002797	trnt1	100	81.733	Haplochromis_burtoni
ENSXCOG00000010150	trnt1	96	68.137	ENSHGLG00000003649	TRNT1	94	68.137	Heterocephalus_glaber_female
ENSXCOG00000010150	trnt1	99	62.028	ENSHGLG00000000221	-	96	62.028	Heterocephalus_glaber_female
ENSXCOG00000010150	trnt1	96	67.157	ENSHGLG00100016421	TRNT1	94	67.157	Heterocephalus_glaber_male
ENSXCOG00000010150	trnt1	99	76.056	ENSHCOG00000010618	trnt1	99	76.056	Hippocampus_comes
ENSXCOG00000010150	trnt1	99	76.168	ENSIPUG00000000971	trnt1	99	76.168	Ictalurus_punctatus
ENSXCOG00000010150	trnt1	96	69.853	ENSSTOG00000000150	TRNT1	86	79.330	Ictidomys_tridecemlineatus
ENSXCOG00000010150	trnt1	96	69.363	ENSJJAG00000018561	Trnt1	94	69.363	Jaculus_jaculus
ENSXCOG00000010150	trnt1	100	83.568	ENSKMAG00000011307	trnt1	100	83.568	Kryptolebias_marmoratus
ENSXCOG00000010150	trnt1	96	76.156	ENSLBEG00000019457	trnt1	97	76.156	Labrus_bergylta
ENSXCOG00000010150	trnt1	98	71.325	ENSLACG00000013227	TRNT1	96	71.325	Latimeria_chalumnae
ENSXCOG00000010150	trnt1	99	73.427	ENSLOCG00000011105	trnt1	98	73.427	Lepisosteus_oculatus
ENSXCOG00000010150	trnt1	96	69.458	ENSLAFG00000023191	TRNT1	94	69.458	Loxodonta_africana
ENSXCOG00000010150	trnt1	96	69.951	ENSMFAG00000045113	TRNT1	92	69.951	Macaca_fascicularis
ENSXCOG00000010150	trnt1	96	69.951	ENSMMUG00000017983	TRNT1	92	69.951	Macaca_mulatta
ENSXCOG00000010150	trnt1	96	69.951	ENSMNEG00000037805	TRNT1	92	69.951	Macaca_nemestrina
ENSXCOG00000010150	trnt1	90	70.419	ENSMLEG00000033671	TRNT1	99	70.419	Mandrillus_leucophaeus
ENSXCOG00000010150	trnt1	99	82.394	ENSMAMG00000023401	trnt1	99	82.394	Mastacembelus_armatus
ENSXCOG00000010150	trnt1	100	81.499	ENSMZEG00005009141	trnt1	100	81.499	Maylandia_zebra
ENSXCOG00000010150	trnt1	75	67.398	ENSMGAG00000009971	TRNT1	99	67.398	Meleagris_gallopavo
ENSXCOG00000010150	trnt1	96	69.118	ENSMAUG00000020707	Trnt1	94	69.118	Mesocricetus_auratus
ENSXCOG00000010150	trnt1	96	69.363	ENSMICG00000016615	TRNT1	94	69.363	Microcebus_murinus
ENSXCOG00000010150	trnt1	96	68.873	ENSMOCG00000004539	Trnt1	94	68.873	Microtus_ochrogaster
ENSXCOG00000010150	trnt1	99	79.953	ENSMMOG00000010742	trnt1	99	79.953	Mola_mola
ENSXCOG00000010150	trnt1	96	68.627	ENSMODG00000004368	TRNT1	94	68.627	Monodelphis_domestica
ENSXCOG00000010150	trnt1	99	80.282	ENSMALG00000008376	trnt1	99	80.282	Monopterus_albus
ENSXCOG00000010150	trnt1	96	68.627	MGP_CAROLIEiJ_G0028698	Trnt1	90	74.590	Mus_caroli
ENSXCOG00000010150	trnt1	96	68.382	ENSMUSG00000013736	Trnt1	83	80.447	Mus_musculus
ENSXCOG00000010150	trnt1	96	69.853	MGP_PahariEiJ_G0022449	Trnt1	88	81.564	Mus_pahari
ENSXCOG00000010150	trnt1	96	68.627	MGP_SPRETEiJ_G0029726	Trnt1	83	80.447	Mus_spretus
ENSXCOG00000010150	trnt1	96	68.719	ENSMPUG00000017017	TRNT1	93	68.719	Mustela_putorius_furo
ENSXCOG00000010150	trnt1	90	69.792	ENSMLUG00000011864	TRNT1	99	69.792	Myotis_lucifugus
ENSXCOG00000010150	trnt1	96	68.137	ENSNGAG00000000537	Trnt1	94	68.137	Nannospalax_galili
ENSXCOG00000010150	trnt1	81	81.792	ENSNBRG00000023606	trnt1	99	81.792	Neolamprologus_brichardi
ENSXCOG00000010150	trnt1	96	69.951	ENSNLEG00000003226	TRNT1	94	69.951	Nomascus_leucogenys
ENSXCOG00000010150	trnt1	96	68.382	ENSMEUG00000004684	TRNT1	94	68.382	Notamacropus_eugenii
ENSXCOG00000010150	trnt1	90	65.969	ENSOPRG00000015067	TRNT1	99	65.969	Ochotona_princeps
ENSXCOG00000010150	trnt1	99	66.667	ENSODEG00000007597	TRNT1	96	66.667	Octodon_degus
ENSXCOG00000010150	trnt1	99	82.629	ENSONIG00000020273	trnt1	98	82.629	Oreochromis_niloticus
ENSXCOG00000010150	trnt1	99	63.232	ENSOANG00000007514	TRNT1	99	63.232	Ornithorhynchus_anatinus
ENSXCOG00000010150	trnt1	98	66.986	ENSOCUG00000008580	TRNT1	97	66.986	Oryctolagus_cuniculus
ENSXCOG00000010150	trnt1	100	79.254	ENSORLG00000003165	trnt1	100	79.254	Oryzias_latipes
ENSXCOG00000010150	trnt1	100	79.720	ENSORLG00020022060	trnt1	100	79.720	Oryzias_latipes_hni
ENSXCOG00000010150	trnt1	100	79.720	ENSORLG00015018915	trnt1	99	79.720	Oryzias_latipes_hsok
ENSXCOG00000010150	trnt1	100	76.471	ENSOMEG00000003331	trnt1	100	76.471	Oryzias_melastigma
ENSXCOG00000010150	trnt1	99	66.903	ENSOARG00000008631	TRNT1	95	66.903	Ovis_aries
ENSXCOG00000010150	trnt1	96	69.458	ENSPPAG00000043566	TRNT1	94	69.458	Pan_paniscus
ENSXCOG00000010150	trnt1	96	68.719	ENSPPRG00000001327	TRNT1	93	68.719	Panthera_pardus
ENSXCOG00000010150	trnt1	96	68.719	ENSPTIG00000011448	TRNT1	93	68.719	Panthera_tigris_altaica
ENSXCOG00000010150	trnt1	96	69.458	ENSPTRG00000014564	TRNT1	94	69.458	Pan_troglodytes
ENSXCOG00000010150	trnt1	96	69.951	ENSPANG00000025944	TRNT1	92	69.951	Papio_anubis
ENSXCOG00000010150	trnt1	99	75.000	ENSPKIG00000020015	trnt1	99	75.000	Paramormyrops_kingsleyae
ENSXCOG00000010150	trnt1	93	70.633	ENSPSIG00000017356	TRNT1	99	70.833	Pelodiscus_sinensis
ENSXCOG00000010150	trnt1	99	77.934	ENSPMGG00000008888	trnt1	98	77.934	Periophthalmus_magnuspinnatus
ENSXCOG00000010150	trnt1	96	69.118	ENSPEMG00000019845	Trnt1	94	69.118	Peromyscus_maniculatus_bairdii
ENSXCOG00000010150	trnt1	96	69.118	ENSPCIG00000030436	TRNT1	94	69.118	Phascolarctos_cinereus
ENSXCOG00000010150	trnt1	99	95.735	ENSPFOG00000006194	trnt1	99	95.735	Poecilia_formosa
ENSXCOG00000010150	trnt1	99	95.498	ENSPLAG00000015623	trnt1	100	95.545	Poecilia_latipinna
ENSXCOG00000010150	trnt1	100	95.529	ENSPMEG00000012216	trnt1	100	95.529	Poecilia_mexicana
ENSXCOG00000010150	trnt1	100	94.824	ENSPREG00000021470	trnt1	100	94.824	Poecilia_reticulata
ENSXCOG00000010150	trnt1	96	69.118	ENSPPYG00000013702	TRNT1	94	69.118	Pongo_abelii
ENSXCOG00000010150	trnt1	90	70.157	ENSPCAG00000001951	TRNT1	99	70.157	Procavia_capensis
ENSXCOG00000010150	trnt1	96	69.458	ENSPCOG00000022228	TRNT1	94	69.458	Propithecus_coquereli
ENSXCOG00000010150	trnt1	90	69.110	ENSPVAG00000008784	TRNT1	99	69.110	Pteropus_vampyrus
ENSXCOG00000010150	trnt1	100	81.265	ENSPNYG00000003120	trnt1	100	81.265	Pundamilia_nyererei
ENSXCOG00000010150	trnt1	99	77.570	ENSPNAG00000000565	trnt1	99	77.570	Pygocentrus_nattereri
ENSXCOG00000010150	trnt1	96	69.608	ENSRNOG00000006432	Trnt1	94	69.608	Rattus_norvegicus
ENSXCOG00000010150	trnt1	96	68.966	ENSRBIG00000042632	TRNT1	93	68.966	Rhinopithecus_bieti
ENSXCOG00000010150	trnt1	96	69.951	ENSRROG00000036866	TRNT1	94	69.951	Rhinopithecus_roxellana
ENSXCOG00000010150	trnt1	96	69.212	ENSSBOG00000021208	TRNT1	94	69.212	Saimiri_boliviensis_boliviensis
ENSXCOG00000010150	trnt1	96	67.980	ENSSHAG00000018861	TRNT1	94	67.980	Sarcophilus_harrisii
ENSXCOG00000010150	trnt1	99	74.592	ENSSFOG00015020844	trnt1	99	74.592	Scleropages_formosus
ENSXCOG00000010150	trnt1	99	83.099	ENSSMAG00000015432	trnt1	98	83.099	Scophthalmus_maximus
ENSXCOG00000010150	trnt1	99	83.803	ENSSDUG00000012320	trnt1	100	83.803	Seriola_dumerili
ENSXCOG00000010150	trnt1	99	83.568	ENSSLDG00000009325	trnt1	100	83.568	Seriola_lalandi_dorsalis
ENSXCOG00000010150	trnt1	57	81.328	ENSSLDG00000016463	-	91	81.590	Seriola_lalandi_dorsalis
ENSXCOG00000010150	trnt1	90	70.942	ENSSPUG00000014153	TRNT1	99	70.942	Sphenodon_punctatus
ENSXCOG00000010150	trnt1	99	81.925	ENSSPAG00000021005	trnt1	99	81.925	Stegastes_partitus
ENSXCOG00000010150	trnt1	96	68.537	ENSSSCG00000011529	TRNT1	96	67.139	Sus_scrofa
ENSXCOG00000010150	trnt1	95	70.792	ENSTGUG00000010192	TRNT1	99	70.792	Taeniopygia_guttata
ENSXCOG00000010150	trnt1	99	79.108	ENSTRUG00000001088	trnt1	99	79.108	Takifugu_rubripes
ENSXCOG00000010150	trnt1	99	78.873	ENSTNIG00000007363	trnt1	98	78.873	Tetraodon_nigroviridis
ENSXCOG00000010150	trnt1	57	62.241	ENSTBEG00000006367	TRNT1	80	62.241	Tupaia_belangeri
ENSXCOG00000010150	trnt1	99	66.430	ENSTTRG00000007803	TRNT1	96	66.430	Tursiops_truncatus
ENSXCOG00000010150	trnt1	96	68.966	ENSUAMG00000022574	TRNT1	93	68.966	Ursus_americanus
ENSXCOG00000010150	trnt1	96	68.719	ENSUMAG00000024092	TRNT1	93	68.719	Ursus_maritimus
ENSXCOG00000010150	trnt1	96	68.966	ENSVVUG00000012810	TRNT1	93	68.966	Vulpes_vulpes
ENSXCOG00000010150	trnt1	96	61.858	ENSXETG00000025091	trnt1	99	61.940	Xenopus_tropicalis
ENSXCOG00000010150	trnt1	100	99.059	ENSXMAG00000002227	trnt1	100	99.059	Xiphophorus_maculatus