EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000010262 (Gene tree)
Gene ID: -
Gene Symbol: p4ha1b
Alias: p4ha1|wu:fc69d06|wu:fi27h11|zgc:56058
Full Name: prolyl 4-hydroxylase%2C alpha polypeptide I b
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 8686 bases
Position: chrKQ557215.1:18997033-19005718
Accession: ZDB-GENE-030131-4089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000016260	2OG-FeII_Oxy	PF03171.20	1.5e-08	1	1
ENSXCOP00000015889	2OG-FeII_Oxy	PF03171.20	1.8e-08	1	1
ENSXCOP00000015883	2OG-FeII_Oxy	PF03171.20	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000016086	-	1638	-	ENSXCOP00000015889	545 (aa)	-	-
ENSXCOT00000016457	-	1509	-	ENSXCOP00000016251	502 (aa)	-	-
ENSXCOT00000016466	-	1485	-	ENSXCOP00000016260	494 (aa)	-	-
ENSXCOT00000016080	-	1650	-	ENSXCOP00000015883	549 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010262	p4ha1b	99	74.307	ENSG00000122884	P4HA1	97	75.475	Homo_sapiens
ENSXCOG00000010262	p4ha1b	97	93.780	ENSAPOG00000005170	p4ha1b	97	87.970	Acanthochromis_polyacanthus
ENSXCOG00000010262	p4ha1b	99	74.492	ENSAMEG00000017009	P4HA1	97	75.856	Ailuropoda_melanoleuca
ENSXCOG00000010262	p4ha1b	100	84.699	ENSACIG00000007255	p4ha1b	99	84.699	Amphilophus_citrinellus
ENSXCOG00000010262	p4ha1b	97	87.902	ENSAOCG00000001647	p4ha1b	99	86.570	Amphiprion_ocellaris
ENSXCOG00000010262	p4ha1b	97	87.902	ENSAPEG00000005243	p4ha1b	99	86.570	Amphiprion_percula
ENSXCOG00000010262	p4ha1b	96	65.201	ENSAPEG00000010402	-	96	65.201	Amphiprion_percula
ENSXCOG00000010262	p4ha1b	99	87.636	ENSATEG00000009272	p4ha1b	99	87.934	Anabas_testudineus
ENSXCOG00000010262	p4ha1b	96	75.238	ENSAPLG00000009284	P4HA1	100	75.238	Anas_platyrhynchos
ENSXCOG00000010262	p4ha1b	96	75.856	ENSACAG00000000564	P4HA1	96	75.856	Anolis_carolinensis
ENSXCOG00000010262	p4ha1b	99	74.630	ENSANAG00000024545	P4HA1	96	79.710	Aotus_nancymaae
ENSXCOG00000010262	p4ha1b	99	84.211	ENSACLG00000021556	p4ha1b	96	88.489	Astatotilapia_calliptera
ENSXCOG00000010262	p4ha1b	99	79.817	ENSAMXG00000011123	p4ha1b	97	80.639	Astyanax_mexicanus
ENSXCOG00000010262	p4ha1b	99	74.492	ENSBTAG00000032996	P4HA1	97	75.665	Bos_taurus
ENSXCOG00000010262	p4ha1b	99	74.630	ENSCJAG00000007429	P4HA1	98	80.567	Callithrix_jacchus
ENSXCOG00000010262	p4ha1b	99	74.444	ENSCAFG00000014573	P4HA1	97	75.475	Canis_familiaris
ENSXCOG00000010262	p4ha1b	98	80.164	ENSCAFG00020023993	P4HA1	94	80.164	Canis_lupus_dingo
ENSXCOG00000010262	p4ha1b	97	75.856	ENSCHIG00000013957	P4HA1	97	75.856	Capra_hircus
ENSXCOG00000010262	p4ha1b	99	74.492	ENSTSYG00000004004	P4HA1	100	81.557	Carlito_syrichta
ENSXCOG00000010262	p4ha1b	97	75.095	ENSCPOG00000015701	P4HA1	96	79.710	Cavia_porcellus
ENSXCOG00000010262	p4ha1b	99	74.307	ENSCATG00000029618	P4HA1	96	79.710	Cercocebus_atys
ENSXCOG00000010262	p4ha1b	99	73.801	ENSCLAG00000017260	P4HA1	96	80.435	Chinchilla_lanigera
ENSXCOG00000010262	p4ha1b	99	73.198	ENSCSAG00000008626	P4HA1	97	74.905	Chlorocebus_sabaeus
ENSXCOG00000010262	p4ha1b	99	75.786	ENSCPBG00000007933	P4HA1	96	76.616	Chrysemys_picta_bellii
ENSXCOG00000010262	p4ha1b	99	74.307	ENSCANG00000033147	P4HA1	96	79.710	Colobus_angolensis_palliatus
ENSXCOG00000010262	p4ha1b	99	73.937	ENSCGRG00001007006	P4ha1	97	79.137	Cricetulus_griseus_chok1gshd
ENSXCOG00000010262	p4ha1b	99	73.937	ENSCGRG00000009371	P4ha1	97	79.137	Cricetulus_griseus_crigri
ENSXCOG00000010262	p4ha1b	99	84.799	ENSCSEG00000004939	p4ha1b	97	85.255	Cynoglossus_semilaevis
ENSXCOG00000010262	p4ha1b	100	90.476	ENSCVAG00000016433	p4ha1b	96	91.856	Cyprinodon_variegatus
ENSXCOG00000010262	p4ha1b	98	39.106	ENSDARG00000017038	zgc:152670	93	53.846	Danio_rerio
ENSXCOG00000010262	p4ha1b	97	82.319	ENSDARG00000071082	p4ha1b	97	82.319	Danio_rerio
ENSXCOG00000010262	p4ha1b	98	72.491	ENSDNOG00000013665	P4HA1	91	74.046	Dasypus_novemcinctus
ENSXCOG00000010262	p4ha1b	99	74.307	ENSDORG00000003405	P4ha1	96	80.435	Dipodomys_ordii
ENSXCOG00000010262	p4ha1b	98	61.495	ENSEBUG00000005379	p4ha1b	95	62.620	Eptatretus_burgeri
ENSXCOG00000010262	p4ha1b	96	74.138	ENSEASG00005016606	P4HA1	96	79.710	Equus_asinus_asinus
ENSXCOG00000010262	p4ha1b	99	74.164	ENSECAG00000012496	P4HA1	100	73.905	Equus_caballus
ENSXCOG00000010262	p4ha1b	81	78.295	ENSEEUG00000005542	P4HA1	82	78.261	Erinaceus_europaeus
ENSXCOG00000010262	p4ha1b	98	77.491	ENSELUG00000005913	p4ha1b	99	77.220	Esox_lucius
ENSXCOG00000010262	p4ha1b	99	74.677	ENSFCAG00000018673	P4HA1	97	76.046	Felis_catus
ENSXCOG00000010262	p4ha1b	99	74.307	ENSFALG00000012773	P4HA1	96	75.475	Ficedula_albicollis
ENSXCOG00000010262	p4ha1b	99	67.652	ENSFDAG00000007094	P4HA1	97	68.631	Fukomys_damarensis
ENSXCOG00000010262	p4ha1b	100	91.289	ENSFHEG00000022856	p4ha1b	96	91.370	Fundulus_heteroclitus
ENSXCOG00000010262	p4ha1b	95	78.119	ENSGMOG00000018948	p4ha1b	100	78.203	Gadus_morhua
ENSXCOG00000010262	p4ha1b	99	75.370	ENSGALG00000004325	P4HA1	97	75.665	Gallus_gallus
ENSXCOG00000010262	p4ha1b	100	97.075	ENSGAFG00000019818	p4ha1b	99	97.075	Gambusia_affinis
ENSXCOG00000010262	p4ha1b	97	84.528	ENSGACG00000010233	p4ha1b	97	84.557	Gasterosteus_aculeatus
ENSXCOG00000010262	p4ha1b	99	74.307	ENSGGOG00000015551	P4HA1	96	79.710	Gorilla_gorilla
ENSXCOG00000010262	p4ha1b	99	84.211	ENSHBUG00000015524	p4ha1b	99	84.211	Haplochromis_burtoni
ENSXCOG00000010262	p4ha1b	99	73.801	ENSHGLG00000011764	P4HA1	96	79.710	Heterocephalus_glaber_female
ENSXCOG00000010262	p4ha1b	94	84.971	ENSHCOG00000017152	p4ha1b	100	84.971	Hippocampus_comes
ENSXCOG00000010262	p4ha1b	97	79.848	ENSIPUG00000015157	P4HA1	97	79.658	Ictalurus_punctatus
ENSXCOG00000010262	p4ha1b	99	74.815	ENSSTOG00000027062	P4HA1	96	78.986	Ictidomys_tridecemlineatus
ENSXCOG00000010262	p4ha1b	99	74.444	ENSJJAG00000004232	P4ha1	96	80.435	Jaculus_jaculus
ENSXCOG00000010262	p4ha1b	97	91.525	ENSKMAG00000001588	p4ha1b	97	91.729	Kryptolebias_marmoratus
ENSXCOG00000010262	p4ha1b	99	86.000	ENSLBEG00000018911	p4ha1b	99	86.000	Labrus_bergylta
ENSXCOG00000010262	p4ha1b	97	76.326	ENSLACG00000010202	P4HA1	97	76.136	Latimeria_chalumnae
ENSXCOG00000010262	p4ha1b	99	79.304	ENSLOCG00000008546	p4ha1b	95	80.608	Lepisosteus_oculatus
ENSXCOG00000010262	p4ha1b	99	74.539	ENSLAFG00000002652	P4HA1	97	75.379	Loxodonta_africana
ENSXCOG00000010262	p4ha1b	99	74.307	ENSMFAG00000030507	P4HA1	96	79.710	Macaca_fascicularis
ENSXCOG00000010262	p4ha1b	95	74.275	ENSMMUG00000011274	P4HA1	96	79.710	Macaca_mulatta
ENSXCOG00000010262	p4ha1b	99	71.561	ENSMNEG00000011433	P4HA1	95	75.348	Macaca_nemestrina
ENSXCOG00000010262	p4ha1b	95	70.600	ENSMLEG00000043338	P4HA1	100	84.016	Mandrillus_leucophaeus
ENSXCOG00000010262	p4ha1b	99	88.073	ENSMAMG00000015854	p4ha1b	97	89.036	Mastacembelus_armatus
ENSXCOG00000010262	p4ha1b	99	84.029	ENSMZEG00005027421	p4ha1b	99	84.029	Maylandia_zebra
ENSXCOG00000010262	p4ha1b	99	73.889	ENSMGAG00000005554	P4HA1	100	75.619	Meleagris_gallopavo
ENSXCOG00000010262	p4ha1b	99	60.185	ENSMAUG00000011056	P4ha1	93	68.197	Mesocricetus_auratus
ENSXCOG00000010262	p4ha1b	99	74.630	ENSMICG00000031365	P4HA1	96	79.710	Microcebus_murinus
ENSXCOG00000010262	p4ha1b	99	73.704	ENSMOCG00000017531	P4ha1	97	78.417	Microtus_ochrogaster
ENSXCOG00000010262	p4ha1b	97	86.553	ENSMMOG00000008022	p4ha1b	97	86.578	Mola_mola
ENSXCOG00000010262	p4ha1b	99	74.861	ENSMODG00000000121	P4HA1	96	76.236	Monodelphis_domestica
ENSXCOG00000010262	p4ha1b	97	88.847	ENSMALG00000019674	p4ha1b	99	86.727	Monopterus_albus
ENSXCOG00000010262	p4ha1b	99	73.752	MGP_CAROLIEiJ_G0015342	P4ha1	96	78.261	Mus_caroli
ENSXCOG00000010262	p4ha1b	99	73.567	ENSMUSG00000019916	P4ha1	96	78.261	Mus_musculus
ENSXCOG00000010262	p4ha1b	99	73.752	MGP_PahariEiJ_G0030758	P4ha1	96	78.986	Mus_pahari
ENSXCOG00000010262	p4ha1b	99	73.567	MGP_SPRETEiJ_G0016153	P4ha1	96	78.261	Mus_spretus
ENSXCOG00000010262	p4ha1b	99	73.704	ENSMPUG00000003940	P4HA1	97	75.285	Mustela_putorius_furo
ENSXCOG00000010262	p4ha1b	99	74.026	ENSMLUG00000006548	P4HA1	97	75.475	Myotis_lucifugus
ENSXCOG00000010262	p4ha1b	99	74.444	ENSNGAG00000014487	P4ha1	97	79.856	Nannospalax_galili
ENSXCOG00000010262	p4ha1b	97	85.660	ENSNBRG00000014791	p4ha1b	97	85.687	Neolamprologus_brichardi
ENSXCOG00000010262	p4ha1b	99	65.619	ENSNLEG00000035416	P4HA1	99	81.328	Nomascus_leucogenys
ENSXCOG00000010262	p4ha1b	90	67.951	ENSMEUG00000010326	P4HA1	95	68.145	Notamacropus_eugenii
ENSXCOG00000010262	p4ha1b	99	64.815	ENSOPRG00000000990	P4HA1	97	66.603	Ochotona_princeps
ENSXCOG00000010262	p4ha1b	98	66.942	ENSODEG00000015164	P4HA1	96	80.435	Octodon_degus
ENSXCOG00000010262	p4ha1b	99	84.991	ENSONIG00000000737	p4ha1b	89	85.172	Oreochromis_niloticus
ENSXCOG00000010262	p4ha1b	80	74.312	ENSOANG00000001125	-	100	75.229	Ornithorhynchus_anatinus
ENSXCOG00000010262	p4ha1b	99	74.074	ENSOCUG00000009739	P4HA1	97	75.095	Oryctolagus_cuniculus
ENSXCOG00000010262	p4ha1b	97	90.431	ENSORLG00000005147	p4ha1b	100	85.934	Oryzias_latipes
ENSXCOG00000010262	p4ha1b	97	90.431	ENSORLG00020010911	p4ha1b	96	86.064	Oryzias_latipes_hni
ENSXCOG00000010262	p4ha1b	90	89.266	ENSORLG00015016175	p4ha1b	98	84.211	Oryzias_latipes_hsok
ENSXCOG00000010262	p4ha1b	97	86.226	ENSOMEG00000009962	p4ha1b	97	86.441	Oryzias_melastigma
ENSXCOG00000010262	p4ha1b	99	74.217	ENSOGAG00000003483	P4HA1	97	75.379	Otolemur_garnettii
ENSXCOG00000010262	p4ha1b	97	74.715	ENSOARG00000007348	P4HA1	97	75.285	Ovis_aries
ENSXCOG00000010262	p4ha1b	99	68.498	ENSPPAG00000030135	P4HA1	100	84.016	Pan_paniscus
ENSXCOG00000010262	p4ha1b	99	74.492	ENSPPRG00000002655	P4HA1	97	75.856	Panthera_pardus
ENSXCOG00000010262	p4ha1b	99	74.492	ENSPTIG00000007711	P4HA1	97	75.856	Panthera_tigris_altaica
ENSXCOG00000010262	p4ha1b	99	68.946	ENSPTRG00000002619	P4HA1	96	79.710	Pan_troglodytes
ENSXCOG00000010262	p4ha1b	99	74.307	ENSPANG00000022355	P4HA1	96	79.710	Papio_anubis
ENSXCOG00000010262	p4ha1b	99	80.443	ENSPKIG00000000438	p4ha1b	96	82.095	Paramormyrops_kingsleyae
ENSXCOG00000010262	p4ha1b	99	75.322	ENSPSIG00000016298	P4HA1	96	76.426	Pelodiscus_sinensis
ENSXCOG00000010262	p4ha1b	99	81.066	ENSPMGG00000007593	p4ha1b	97	83.112	Periophthalmus_magnuspinnatus
ENSXCOG00000010262	p4ha1b	99	73.333	ENSPEMG00000006561	P4ha1	97	79.137	Peromyscus_maniculatus_bairdii
ENSXCOG00000010262	p4ha1b	99	75.786	ENSPCIG00000018768	P4HA1	97	76.894	Phascolarctos_cinereus
ENSXCOG00000010262	p4ha1b	100	96.161	ENSPFOG00000018574	p4ha1b	99	96.161	Poecilia_formosa
ENSXCOG00000010262	p4ha1b	100	96.161	ENSPLAG00000012628	p4ha1b	100	98.718	Poecilia_latipinna
ENSXCOG00000010262	p4ha1b	100	96.161	ENSPMEG00000024082	p4ha1b	99	96.161	Poecilia_mexicana
ENSXCOG00000010262	p4ha1b	100	96.527	ENSPREG00000010003	p4ha1b	99	96.527	Poecilia_reticulata
ENSXCOG00000010262	p4ha1b	99	73.198	ENSPPYG00000002348	P4HA1	97	74.905	Pongo_abelii
ENSXCOG00000010262	p4ha1b	95	67.829	ENSPCOG00000017553	P4HA1	100	84.426	Propithecus_coquereli
ENSXCOG00000010262	p4ha1b	99	65.799	ENSPVAG00000012989	P4HA1	97	67.110	Pteropus_vampyrus
ENSXCOG00000010262	p4ha1b	99	84.392	ENSPNYG00000002443	p4ha1b	99	84.392	Pundamilia_nyererei
ENSXCOG00000010262	p4ha1b	99	80.479	ENSPNAG00000023149	p4ha1b	97	82.075	Pygocentrus_nattereri
ENSXCOG00000010262	p4ha1b	99	72.593	ENSRNOG00000050655	P4ha1	97	74.194	Rattus_norvegicus
ENSXCOG00000010262	p4ha1b	98	66.463	ENSRBIG00000035304	P4HA1	97	65.970	Rhinopithecus_bieti
ENSXCOG00000010262	p4ha1b	99	74.444	ENSRROG00000044078	P4HA1	96	79.710	Rhinopithecus_roxellana
ENSXCOG00000010262	p4ha1b	69	73.698	ENSSHAG00000008056	P4HA1	99	73.958	Sarcophilus_harrisii
ENSXCOG00000010262	p4ha1b	99	79.742	ENSSFOG00015009176	p4ha1b	100	79.612	Scleropages_formosus
ENSXCOG00000010262	p4ha1b	99	86.630	ENSSMAG00000019199	p4ha1b	97	86.957	Scophthalmus_maximus
ENSXCOG00000010262	p4ha1b	99	87.091	ENSSDUG00000016587	p4ha1b	99	87.091	Seriola_dumerili
ENSXCOG00000010262	p4ha1b	99	88.182	ENSSLDG00000016261	p4ha1b	99	88.182	Seriola_lalandi_dorsalis
ENSXCOG00000010262	p4ha1b	99	71.481	ENSSARG00000003275	P4HA1	97	72.433	Sorex_araneus
ENSXCOG00000010262	p4ha1b	99	75.786	ENSSPUG00000002624	P4HA1	96	76.616	Sphenodon_punctatus
ENSXCOG00000010262	p4ha1b	85	85.714	ENSSPAG00000011193	p4ha1b	100	85.714	Stegastes_partitus
ENSXCOG00000010262	p4ha1b	99	74.630	ENSSSCG00000010292	P4HA1	97	75.665	Sus_scrofa
ENSXCOG00000010262	p4ha1b	99	74.307	ENSTGUG00000004364	-	97	75.475	Taeniopygia_guttata
ENSXCOG00000010262	p4ha1b	99	85.740	ENSTRUG00000004081	p4ha1b	97	86.142	Takifugu_rubripes
ENSXCOG00000010262	p4ha1b	99	84.559	ENSTNIG00000017021	p4ha1b	97	85.389	Tetraodon_nigroviridis
ENSXCOG00000010262	p4ha1b	99	72.778	ENSTTRG00000009782	P4HA1	96	74.521	Tursiops_truncatus
ENSXCOG00000010262	p4ha1b	54	77.068	ENSUAMG00000011694	-	100	84.016	Ursus_americanus
ENSXCOG00000010262	p4ha1b	99	74.815	ENSUMAG00000009024	P4HA1	97	75.665	Ursus_maritimus
ENSXCOG00000010262	p4ha1b	98	66.419	ENSVPAG00000007253	P4HA1	97	66.920	Vicugna_pacos
ENSXCOG00000010262	p4ha1b	99	73.333	ENSVVUG00000022660	P4HA1	97	75.095	Vulpes_vulpes
ENSXCOG00000010262	p4ha1b	98	71.111	ENSXETG00000006154	p4ha1	96	71.645	Xenopus_tropicalis
ENSXCOG00000010262	p4ha1b	100	98.532	ENSXMAG00000003889	p4ha1b	99	98.532	Xiphophorus_maculatus