EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000010301 (Gene tree)
Gene ID: -
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: polymerase (RNA) III (DNA directed) polypeptide F
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 4721 bases
Position: chrKQ557220.1:1703030-1707750
Accession: ZDB-GENE-040426-972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000013604	RNA_pol_Rpc34	PF05158.12	2.9e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000013771	-	828	-	ENSXCOP00000013604	275 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010301's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010301	polr3f	100	87.273	ENSG00000132664	POLR3F	87	87.273	Homo_sapiens
ENSXCOG00000010301	polr3f	100	96.000	ENSAPOG00000008271	polr3f	90	96.000	Acanthochromis_polyacanthus
ENSXCOG00000010301	polr3f	100	86.909	ENSAMEG00000005222	POLR3F	87	86.909	Ailuropoda_melanoleuca
ENSXCOG00000010301	polr3f	100	90.909	ENSACIG00000006705	polr3f	89	90.909	Amphilophus_citrinellus
ENSXCOG00000010301	polr3f	100	96.364	ENSAOCG00000000687	polr3f	87	96.364	Amphiprion_ocellaris
ENSXCOG00000010301	polr3f	100	96.000	ENSAPEG00000015263	polr3f	87	96.000	Amphiprion_percula
ENSXCOG00000010301	polr3f	100	95.273	ENSATEG00000015539	polr3f	100	95.273	Anabas_testudineus
ENSXCOG00000010301	polr3f	100	88.364	ENSAPLG00000005533	POLR3F	100	88.364	Anas_platyrhynchos
ENSXCOG00000010301	polr3f	100	85.818	ENSACAG00000014293	POLR3F	89	85.818	Anolis_carolinensis
ENSXCOG00000010301	polr3f	100	87.636	ENSANAG00000026726	POLR3F	87	87.636	Aotus_nancymaae
ENSXCOG00000010301	polr3f	100	95.636	ENSACLG00000003615	polr3f	87	95.636	Astatotilapia_calliptera
ENSXCOG00000010301	polr3f	100	92.727	ENSAMXG00000036020	polr3f	88	92.727	Astyanax_mexicanus
ENSXCOG00000010301	polr3f	100	86.545	ENSBTAG00000008825	POLR3F	87	86.545	Bos_taurus
ENSXCOG00000010301	polr3f	99	34.432	WBGene00021112	W09C3.4	86	34.432	Caenorhabditis_elegans
ENSXCOG00000010301	polr3f	100	87.636	ENSCJAG00000005159	POLR3F	87	87.636	Callithrix_jacchus
ENSXCOG00000010301	polr3f	100	86.909	ENSCAFG00000005420	POLR3F	87	86.909	Canis_familiaris
ENSXCOG00000010301	polr3f	100	86.909	ENSCAFG00020027500	POLR3F	87	86.909	Canis_lupus_dingo
ENSXCOG00000010301	polr3f	100	86.545	ENSCHIG00000014743	POLR3F	87	86.545	Capra_hircus
ENSXCOG00000010301	polr3f	100	86.545	ENSTSYG00000004207	POLR3F	87	86.545	Carlito_syrichta
ENSXCOG00000010301	polr3f	80	71.429	ENSCAPG00000008423	POLR3F	90	71.429	Cavia_aperea
ENSXCOG00000010301	polr3f	100	87.273	ENSCPOG00000002400	POLR3F	87	87.273	Cavia_porcellus
ENSXCOG00000010301	polr3f	100	76.364	ENSCCAG00000021800	POLR3F	85	76.364	Cebus_capucinus
ENSXCOG00000010301	polr3f	100	86.909	ENSCATG00000019507	POLR3F	87	86.909	Cercocebus_atys
ENSXCOG00000010301	polr3f	100	86.909	ENSCLAG00000016296	POLR3F	87	86.909	Chinchilla_lanigera
ENSXCOG00000010301	polr3f	100	86.909	ENSCSAG00000011513	POLR3F	87	86.909	Chlorocebus_sabaeus
ENSXCOG00000010301	polr3f	69	87.255	ENSCHOG00000013268	POLR3F	60	87.255	Choloepus_hoffmanni
ENSXCOG00000010301	polr3f	100	87.273	ENSCPBG00000023473	POLR3F	100	87.273	Chrysemys_picta_bellii
ENSXCOG00000010301	polr3f	98	62.593	ENSCING00000001212	-	85	62.593	Ciona_intestinalis
ENSXCOG00000010301	polr3f	68	64.171	ENSCSAVG00000003340	-	96	62.722	Ciona_savignyi
ENSXCOG00000010301	polr3f	91	87.200	ENSCANG00000037390	POLR3F	86	87.200	Colobus_angolensis_palliatus
ENSXCOG00000010301	polr3f	100	87.273	ENSCGRG00001002032	Polr3f	87	87.273	Cricetulus_griseus_chok1gshd
ENSXCOG00000010301	polr3f	100	87.273	ENSCGRG00000010852	Polr3f	87	87.273	Cricetulus_griseus_crigri
ENSXCOG00000010301	polr3f	100	92.727	ENSCSEG00000001247	polr3f	87	92.727	Cynoglossus_semilaevis
ENSXCOG00000010301	polr3f	100	96.000	ENSCVAG00000007611	polr3f	87	96.000	Cyprinodon_variegatus
ENSXCOG00000010301	polr3f	100	92.000	ENSDARG00000012572	polr3f	88	92.000	Danio_rerio
ENSXCOG00000010301	polr3f	100	84.364	ENSDNOG00000010719	POLR3F	87	84.364	Dasypus_novemcinctus
ENSXCOG00000010301	polr3f	100	87.636	ENSDORG00000016352	Polr3f	87	87.636	Dipodomys_ordii
ENSXCOG00000010301	polr3f	99	53.818	FBgn0038951	CG5380	90	53.818	Drosophila_melanogaster
ENSXCOG00000010301	polr3f	91	48.000	ENSETEG00000015485	-	89	48.000	Echinops_telfairi
ENSXCOG00000010301	polr3f	100	78.182	ENSEBUG00000006783	polr3f	88	78.182	Eptatretus_burgeri
ENSXCOG00000010301	polr3f	100	87.273	ENSEASG00005002022	POLR3F	87	87.273	Equus_asinus_asinus
ENSXCOG00000010301	polr3f	100	87.273	ENSECAG00000009920	POLR3F	87	87.273	Equus_caballus
ENSXCOG00000010301	polr3f	77	80.000	ENSEEUG00000000184	POLR3F	67	80.000	Erinaceus_europaeus
ENSXCOG00000010301	polr3f	100	92.000	ENSELUG00000001558	polr3f	88	92.000	Esox_lucius
ENSXCOG00000010301	polr3f	100	86.909	ENSFCAG00000013828	POLR3F	87	86.909	Felis_catus
ENSXCOG00000010301	polr3f	100	88.000	ENSFALG00000007623	POLR3F	100	88.000	Ficedula_albicollis
ENSXCOG00000010301	polr3f	100	86.545	ENSFDAG00000002528	POLR3F	87	86.545	Fukomys_damarensis
ENSXCOG00000010301	polr3f	100	96.364	ENSFHEG00000006450	polr3f	87	96.364	Fundulus_heteroclitus
ENSXCOG00000010301	polr3f	100	88.364	ENSGALG00000008749	POLR3F	88	88.364	Gallus_gallus
ENSXCOG00000010301	polr3f	100	99.273	ENSGAFG00000003698	polr3f	87	99.273	Gambusia_affinis
ENSXCOG00000010301	polr3f	100	87.273	ENSGAGG00000006151	POLR3F	88	87.273	Gopherus_agassizii
ENSXCOG00000010301	polr3f	100	87.273	ENSGGOG00000011543	POLR3F	87	87.273	Gorilla_gorilla
ENSXCOG00000010301	polr3f	100	95.636	ENSHBUG00000013806	polr3f	87	95.636	Haplochromis_burtoni
ENSXCOG00000010301	polr3f	100	86.545	ENSHGLG00000011867	POLR3F	87	86.545	Heterocephalus_glaber_female
ENSXCOG00000010301	polr3f	100	86.545	ENSHGLG00100012577	POLR3F	87	86.545	Heterocephalus_glaber_male
ENSXCOG00000010301	polr3f	100	82.182	ENSHCOG00000011751	polr3f	87	82.182	Hippocampus_comes
ENSXCOG00000010301	polr3f	100	92.727	ENSIPUG00000013347	polr3f	88	92.727	Ictalurus_punctatus
ENSXCOG00000010301	polr3f	100	86.909	ENSSTOG00000013588	POLR3F	87	86.909	Ictidomys_tridecemlineatus
ENSXCOG00000010301	polr3f	100	86.909	ENSJJAG00000017513	Polr3f	87	86.909	Jaculus_jaculus
ENSXCOG00000010301	polr3f	100	87.636	ENSKMAG00000016495	polr3f	100	87.636	Kryptolebias_marmoratus
ENSXCOG00000010301	polr3f	84	96.121	ENSLBEG00000011998	polr3f	100	96.121	Labrus_bergylta
ENSXCOG00000010301	polr3f	100	89.455	ENSLACG00000009371	POLR3F	88	89.455	Latimeria_chalumnae
ENSXCOG00000010301	polr3f	100	90.909	ENSLOCG00000015701	polr3f	88	90.909	Lepisosteus_oculatus
ENSXCOG00000010301	polr3f	100	86.545	ENSLAFG00000004929	POLR3F	87	86.545	Loxodonta_africana
ENSXCOG00000010301	polr3f	100	86.909	ENSMFAG00000002227	POLR3F	87	86.909	Macaca_fascicularis
ENSXCOG00000010301	polr3f	100	86.909	ENSMMUG00000004143	POLR3F	100	86.909	Macaca_mulatta
ENSXCOG00000010301	polr3f	100	86.909	ENSMNEG00000033404	POLR3F	87	86.909	Macaca_nemestrina
ENSXCOG00000010301	polr3f	100	86.909	ENSMLEG00000021905	POLR3F	87	86.909	Mandrillus_leucophaeus
ENSXCOG00000010301	polr3f	100	94.182	ENSMAMG00000017975	polr3f	87	94.182	Mastacembelus_armatus
ENSXCOG00000010301	polr3f	100	95.636	ENSMZEG00005015134	polr3f	87	95.636	Maylandia_zebra
ENSXCOG00000010301	polr3f	100	88.364	ENSMGAG00000006691	POLR3F	88	88.364	Meleagris_gallopavo
ENSXCOG00000010301	polr3f	100	86.909	ENSMAUG00000020176	Polr3f	87	86.909	Mesocricetus_auratus
ENSXCOG00000010301	polr3f	100	86.909	ENSMICG00000044519	POLR3F	87	86.909	Microcebus_murinus
ENSXCOG00000010301	polr3f	100	87.273	ENSMOCG00000018352	Polr3f	87	87.273	Microtus_ochrogaster
ENSXCOG00000010301	polr3f	100	93.502	ENSMMOG00000018477	polr3f	93	93.502	Mola_mola
ENSXCOG00000010301	polr3f	100	86.909	ENSMODG00000005624	POLR3F	87	86.909	Monodelphis_domestica
ENSXCOG00000010301	polr3f	100	95.273	ENSMALG00000006685	polr3f	87	95.273	Monopterus_albus
ENSXCOG00000010301	polr3f	100	86.909	MGP_CAROLIEiJ_G0024385	Polr3f	87	86.909	Mus_caroli
ENSXCOG00000010301	polr3f	100	86.909	ENSMUSG00000027427	Polr3f	87	86.909	Mus_musculus
ENSXCOG00000010301	polr3f	100	86.909	MGP_PahariEiJ_G0025829	Polr3f	87	86.909	Mus_pahari
ENSXCOG00000010301	polr3f	100	86.909	MGP_SPRETEiJ_G0025304	Polr3f	87	86.909	Mus_spretus
ENSXCOG00000010301	polr3f	100	63.732	ENSMPUG00000001252	-	87	63.732	Mustela_putorius_furo
ENSXCOG00000010301	polr3f	100	86.909	ENSMLUG00000014844	POLR3F	87	86.909	Myotis_lucifugus
ENSXCOG00000010301	polr3f	100	86.545	ENSNGAG00000010898	Polr3f	87	86.545	Nannospalax_galili
ENSXCOG00000010301	polr3f	100	95.636	ENSNBRG00000020796	polr3f	87	95.636	Neolamprologus_brichardi
ENSXCOG00000010301	polr3f	100	87.273	ENSNLEG00000009778	POLR3F	87	87.273	Nomascus_leucogenys
ENSXCOG00000010301	polr3f	100	80.364	ENSMEUG00000010320	POLR3F	93	80.364	Notamacropus_eugenii
ENSXCOG00000010301	polr3f	100	86.182	ENSOPRG00000003385	POLR3F	87	86.182	Ochotona_princeps
ENSXCOG00000010301	polr3f	100	86.545	ENSODEG00000011521	POLR3F	87	86.545	Octodon_degus
ENSXCOG00000010301	polr3f	100	96.000	ENSONIG00000006858	polr3f	87	96.000	Oreochromis_niloticus
ENSXCOG00000010301	polr3f	100	87.636	ENSOANG00000001253	POLR3F	87	87.636	Ornithorhynchus_anatinus
ENSXCOG00000010301	polr3f	100	86.909	ENSOCUG00000015067	POLR3F	87	86.909	Oryctolagus_cuniculus
ENSXCOG00000010301	polr3f	100	93.455	ENSORLG00000022412	polr3f	87	93.455	Oryzias_latipes
ENSXCOG00000010301	polr3f	100	93.455	ENSORLG00020021944	polr3f	87	93.455	Oryzias_latipes_hni
ENSXCOG00000010301	polr3f	100	85.091	ENSOGAG00000002916	POLR3F	87	85.091	Otolemur_garnettii
ENSXCOG00000010301	polr3f	100	47.636	ENSOARG00000008647	-	69	59.585	Ovis_aries
ENSXCOG00000010301	polr3f	100	86.545	ENSOARG00000000315	-	87	86.545	Ovis_aries
ENSXCOG00000010301	polr3f	100	87.273	ENSPPAG00000036681	POLR3F	87	87.273	Pan_paniscus
ENSXCOG00000010301	polr3f	100	86.909	ENSPPRG00000024604	POLR3F	87	86.909	Panthera_pardus
ENSXCOG00000010301	polr3f	100	86.909	ENSPTIG00000020292	POLR3F	87	86.909	Panthera_tigris_altaica
ENSXCOG00000010301	polr3f	100	87.273	ENSPTRG00000013287	POLR3F	87	87.273	Pan_troglodytes
ENSXCOG00000010301	polr3f	100	86.909	ENSPANG00000025015	POLR3F	87	86.909	Papio_anubis
ENSXCOG00000010301	polr3f	100	90.909	ENSPKIG00000004427	polr3f	88	90.909	Paramormyrops_kingsleyae
ENSXCOG00000010301	polr3f	100	88.727	ENSPSIG00000016613	POLR3F	100	88.727	Pelodiscus_sinensis
ENSXCOG00000010301	polr3f	100	53.091	ENSPMGG00000018350	polr3f	84	58.909	Periophthalmus_magnuspinnatus
ENSXCOG00000010301	polr3f	100	87.636	ENSPEMG00000006966	Polr3f	87	87.636	Peromyscus_maniculatus_bairdii
ENSXCOG00000010301	polr3f	100	78.909	ENSPMAG00000005530	polr3f	88	78.909	Petromyzon_marinus
ENSXCOG00000010301	polr3f	100	86.545	ENSPCIG00000000908	POLR3F	74	86.545	Phascolarctos_cinereus
ENSXCOG00000010301	polr3f	100	99.636	ENSPFOG00000018334	polr3f	87	99.636	Poecilia_formosa
ENSXCOG00000010301	polr3f	100	99.636	ENSPLAG00000021803	polr3f	87	99.636	Poecilia_latipinna
ENSXCOG00000010301	polr3f	100	99.636	ENSPMEG00000013150	polr3f	87	99.636	Poecilia_mexicana
ENSXCOG00000010301	polr3f	100	99.636	ENSPREG00000005278	polr3f	87	99.636	Poecilia_reticulata
ENSXCOG00000010301	polr3f	100	87.273	ENSPPYG00000010737	POLR3F	87	87.273	Pongo_abelii
ENSXCOG00000010301	polr3f	54	87.162	ENSPCAG00000004893	POLR3F	51	87.162	Procavia_capensis
ENSXCOG00000010301	polr3f	100	86.909	ENSPCOG00000004543	POLR3F	87	86.909	Propithecus_coquereli
ENSXCOG00000010301	polr3f	100	86.545	ENSPVAG00000000403	POLR3F	87	86.545	Pteropus_vampyrus
ENSXCOG00000010301	polr3f	100	95.636	ENSPNYG00000016276	polr3f	87	95.636	Pundamilia_nyererei
ENSXCOG00000010301	polr3f	100	92.727	ENSPNAG00000005164	polr3f	88	92.727	Pygocentrus_nattereri
ENSXCOG00000010301	polr3f	100	86.909	ENSRNOG00000007548	Polr3f	74	86.909	Rattus_norvegicus
ENSXCOG00000010301	polr3f	100	86.909	ENSRBIG00000021268	POLR3F	87	86.909	Rhinopithecus_bieti
ENSXCOG00000010301	polr3f	100	86.909	ENSRROG00000039911	POLR3F	87	86.909	Rhinopithecus_roxellana
ENSXCOG00000010301	polr3f	71	30.244	YNR003C	RPC34	55	32.203	Saccharomyces_cerevisiae
ENSXCOG00000010301	polr3f	100	87.636	ENSSBOG00000018207	POLR3F	87	87.636	Saimiri_boliviensis_boliviensis
ENSXCOG00000010301	polr3f	81	85.333	ENSSHAG00000018160	POLR3F	75	83.983	Sarcophilus_harrisii
ENSXCOG00000010301	polr3f	100	91.273	ENSSFOG00015022433	polr3f	88	91.273	Scleropages_formosus
ENSXCOG00000010301	polr3f	100	92.727	ENSSMAG00000021029	polr3f	87	92.727	Scophthalmus_maximus
ENSXCOG00000010301	polr3f	100	81.818	ENSSDUG00000022435	polr3f	86	81.818	Seriola_dumerili
ENSXCOG00000010301	polr3f	100	93.818	ENSSLDG00000012761	polr3f	87	93.818	Seriola_lalandi_dorsalis
ENSXCOG00000010301	polr3f	100	76.727	ENSSARG00000006039	POLR3F	87	76.727	Sorex_araneus
ENSXCOG00000010301	polr3f	100	86.909	ENSSPUG00000001873	POLR3F	88	86.909	Sphenodon_punctatus
ENSXCOG00000010301	polr3f	100	87.636	ENSSPAG00000002092	polr3f	86	87.636	Stegastes_partitus
ENSXCOG00000010301	polr3f	100	86.545	ENSSSCG00000007095	POLR3F	100	89.655	Sus_scrofa
ENSXCOG00000010301	polr3f	100	88.000	ENSTGUG00000005839	POLR3F	88	88.000	Taeniopygia_guttata
ENSXCOG00000010301	polr3f	100	92.727	ENSTRUG00000012101	polr3f	87	92.727	Takifugu_rubripes
ENSXCOG00000010301	polr3f	100	92.000	ENSTNIG00000006456	polr3f	87	92.000	Tetraodon_nigroviridis
ENSXCOG00000010301	polr3f	100	68.727	ENSTBEG00000007921	POLR3F	87	68.727	Tupaia_belangeri
ENSXCOG00000010301	polr3f	100	86.545	ENSTTRG00000002580	POLR3F	87	86.545	Tursiops_truncatus
ENSXCOG00000010301	polr3f	60	86.145	ENSUAMG00000024166	POLR3F	100	86.145	Ursus_americanus
ENSXCOG00000010301	polr3f	100	86.545	ENSUMAG00000024944	POLR3F	87	86.545	Ursus_maritimus
ENSXCOG00000010301	polr3f	100	85.818	ENSVPAG00000009063	POLR3F	87	85.818	Vicugna_pacos
ENSXCOG00000010301	polr3f	100	86.909	ENSVVUG00000012925	POLR3F	87	86.909	Vulpes_vulpes
ENSXCOG00000010301	polr3f	100	87.636	ENSXETG00000024898	polr3f	88	87.636	Xenopus_tropicalis
ENSXCOG00000010301	polr3f	100	100.000	ENSXMAG00000004604	polr3f	87	100.000	Xiphophorus_maculatus