EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000010330 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 18673 bases
Position: chrKQ557208.1:11782265-11800937
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000013640	Ribonuc_2-5A	PF06479.12	2.4e-40	1	1
ENSXCOP00000013641	Ribonuc_2-5A	PF06479.12	2.5e-40	1	1
ENSXCOP00000013642	Ribonuc_2-5A	PF06479.12	2.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000013807	-	3018	-	ENSXCOP00000013640	1005 (aa)	-	-
ENSXCOT00000013808	-	3039	-	ENSXCOP00000013641	1012 (aa)	-	-
ENSXCOT00000013809	-	3078	-	ENSXCOP00000013642	1025 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000010330	ern1	67	68.342	ENSXCOG00000009393	ern2	89	68.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010330	ern1	98	90.180	ENSAPOG00000009999	ern1	92	90.180	Acanthochromis_polyacanthus
ENSXCOG00000010330	ern1	97	90.457	ENSACIG00000021716	ern1	91	90.457	Amphilophus_citrinellus
ENSXCOG00000010330	ern1	97	91.548	ENSAOCG00000012309	ern1	91	91.548	Amphiprion_ocellaris
ENSXCOG00000010330	ern1	97	91.039	ENSAPEG00000011263	ern1	98	92.649	Amphiprion_percula
ENSXCOG00000010330	ern1	97	89.613	ENSATEG00000024468	ern1	90	89.613	Anabas_testudineus
ENSXCOG00000010330	ern1	97	91.066	ENSACLG00000027919	ern1	91	91.066	Astatotilapia_calliptera
ENSXCOG00000010330	ern1	93	85.338	ENSAMXG00000000944	ern1	91	85.026	Astyanax_mexicanus
ENSXCOG00000010330	ern1	97	87.143	ENSCSEG00000014500	ern1	96	87.169	Cynoglossus_semilaevis
ENSXCOG00000010330	ern1	97	94.882	ENSCVAG00000002988	ern1	94	94.882	Cyprinodon_variegatus
ENSXCOG00000010330	ern1	95	81.508	ENSDARG00000013997	ern1	98	82.113	Danio_rerio
ENSXCOG00000010330	ern1	98	79.447	ENSELUG00000005957	ern1	97	79.447	Esox_lucius
ENSXCOG00000010330	ern1	97	93.769	ENSFHEG00000005578	ern1	93	93.769	Fundulus_heteroclitus
ENSXCOG00000010330	ern1	93	86.966	ENSGMOG00000011232	ern1	100	86.966	Gadus_morhua
ENSXCOG00000010330	ern1	97	98.769	ENSGAFG00000020231	ern1	95	97.632	Gambusia_affinis
ENSXCOG00000010330	ern1	93	90.385	ENSGACG00000011700	ern1	97	90.385	Gasterosteus_aculeatus
ENSXCOG00000010330	ern1	97	90.964	ENSHBUG00000012581	ern1	92	90.451	Haplochromis_burtoni
ENSXCOG00000010330	ern1	98	85.051	ENSHCOG00000016199	ern1	94	84.990	Hippocampus_comes
ENSXCOG00000010330	ern1	95	83.005	ENSIPUG00000011083	ern1	93	83.005	Ictalurus_punctatus
ENSXCOG00000010330	ern1	97	90.722	ENSKMAG00000019499	ern1	90	90.722	Kryptolebias_marmoratus
ENSXCOG00000010330	ern1	97	86.249	ENSLBEG00000025907	ern1	92	86.249	Labrus_bergylta
ENSXCOG00000010330	ern1	97	89.585	ENSMAMG00000023439	ern1	93	89.585	Mastacembelus_armatus
ENSXCOG00000010330	ern1	97	91.066	ENSMZEG00005003221	ern1	91	91.066	Maylandia_zebra
ENSXCOG00000010330	ern1	94	89.768	ENSMMOG00000007650	ern1	94	89.768	Mola_mola
ENSXCOG00000010330	ern1	94	91.579	ENSMALG00000017775	ern1	87	91.579	Monopterus_albus
ENSXCOG00000010330	ern1	98	90.200	ENSNBRG00000002179	ern1	94	90.200	Neolamprologus_brichardi
ENSXCOG00000010330	ern1	93	91.314	ENSONIG00000017169	ern1	98	91.314	Oreochromis_niloticus
ENSXCOG00000010330	ern1	95	89.659	ENSORLG00000008940	ern1	91	89.206	Oryzias_latipes
ENSXCOG00000010330	ern1	95	89.659	ENSORLG00020018387	ern1	91	89.206	Oryzias_latipes_hni
ENSXCOG00000010330	ern1	95	89.349	ENSORLG00015007946	ern1	91	88.900	Oryzias_latipes_hsok
ENSXCOG00000010330	ern1	95	90.113	ENSOMEG00000011741	ern1	92	89.655	Oryzias_melastigma
ENSXCOG00000010330	ern1	94	83.246	ENSPKIG00000005593	ern1	97	83.246	Paramormyrops_kingsleyae
ENSXCOG00000010330	ern1	97	87.398	ENSPMGG00000020442	ern1	96	86.917	Periophthalmus_magnuspinnatus
ENSXCOG00000010330	ern1	97	98.974	ENSPFOG00000007378	ern1	97	94.385	Poecilia_formosa
ENSXCOG00000010330	ern1	97	98.974	ENSPLAG00000014780	ern1	99	94.385	Poecilia_latipinna
ENSXCOG00000010330	ern1	97	99.077	ENSPMEG00000016324	ern1	100	93.910	Poecilia_mexicana
ENSXCOG00000010330	ern1	97	98.256	ENSPREG00000006286	ern1	97	93.708	Poecilia_reticulata
ENSXCOG00000010330	ern1	97	91.141	ENSPNYG00000017929	ern1	95	91.141	Pundamilia_nyererei
ENSXCOG00000010330	ern1	98	83.233	ENSPNAG00000029447	ern1	98	82.203	Pygocentrus_nattereri
ENSXCOG00000010330	ern1	97	88.798	ENSSMAG00000015042	ern1	90	88.798	Scophthalmus_maximus
ENSXCOG00000010330	ern1	97	92.057	ENSSDUG00000009098	ern1	90	92.057	Seriola_dumerili
ENSXCOG00000010330	ern1	97	91.853	ENSSLDG00000023254	ern1	90	91.853	Seriola_lalandi_dorsalis
ENSXCOG00000010330	ern1	97	91.075	ENSSPAG00000017539	ern1	93	90.983	Stegastes_partitus
ENSXCOG00000010330	ern1	96	87.888	ENSTRUG00000001041	ern1	93	87.888	Takifugu_rubripes
ENSXCOG00000010330	ern1	93	90.213	ENSTNIG00000017990	ern1	98	90.329	Tetraodon_nigroviridis
ENSXCOG00000010330	ern1	97	99.489	ENSXMAG00000001310	ern1	97	96.321	Xiphophorus_maculatus