EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000010422 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Plus strand
Length: 80020 bases
Position: chrKQ557213.1:3293805-3373824
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000013774	zf-C2H2	PF00096.26	1.9e-17	1	3
ENSXCOP00000013774	zf-C2H2	PF00096.26	1.9e-17	2	3
ENSXCOP00000013774	zf-C2H2	PF00096.26	1.9e-17	3	3
ENSXCOP00000013774	zf-met	PF12874.7	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000013943	-	1110	-	ENSXCOP00000013774	369 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000010422	-	58	50.459	ENSXCOG00000007529	-	95	48.438
ENSXCOG00000010422	-	72	47.368	ENSXCOG00000001200	-	89	50.562
ENSXCOG00000010422	-	79	39.773	ENSXCOG00000001544	hic2	52	39.535
ENSXCOG00000010422	-	63	43.119	ENSXCOG00000008116	-	86	43.165
ENSXCOG00000010422	-	55	36.792	ENSXCOG00000002473	-	85	40.230
ENSXCOG00000010422	-	51	35.106	ENSXCOG00000003001	-	86	35.106
ENSXCOG00000010422	-	53	50.980	ENSXCOG00000007406	-	93	50.980
ENSXCOG00000010422	-	58	35.533	ENSXCOG00000010488	-	51	39.053
ENSXCOG00000010422	-	61	36.364	ENSXCOG00000003499	-	52	37.956
ENSXCOG00000010422	-	54	51.351	ENSXCOG00000003493	-	62	51.351
ENSXCOG00000010422	-	53	48.000	ENSXCOG00000019484	-	84	47.674
ENSXCOG00000010422	-	57	39.053	ENSXCOG00000002512	-	73	48.246
ENSXCOG00000010422	-	63	35.912	ENSXCOG00000003896	-	69	36.782
ENSXCOG00000010422	-	55	45.763	ENSXCOG00000007396	-	86	45.763
ENSXCOG00000010422	-	53	40.123	ENSXCOG00000002857	-	92	50.505
ENSXCOG00000010422	-	59	44.118	ENSXCOG00000019401	-	91	44.118
ENSXCOG00000010422	-	58	37.870	ENSXCOG00000015441	-	83	45.872
ENSXCOG00000010422	-	54	45.763	ENSXCOG00000009768	-	74	45.763
ENSXCOG00000010422	-	61	38.372	ENSXCOG00000003441	-	63	39.252
ENSXCOG00000010422	-	59	39.645	ENSXCOG00000009003	-	97	39.645
ENSXCOG00000010422	-	56	36.025	ENSXCOG00000007945	-	85	46.226
ENSXCOG00000010422	-	56	34.320	ENSXCOG00000019457	-	85	50.515
ENSXCOG00000010422	-	95	37.838	ENSXCOG00000001753	bcl6b	89	38.095
ENSXCOG00000010422	-	58	55.172	ENSXCOG00000019443	-	98	44.853
ENSXCOG00000010422	-	58	37.324	ENSXCOG00000002869	-	61	37.324
ENSXCOG00000010422	-	50	39.091	ENSXCOG00000002714	-	83	39.091
ENSXCOG00000010422	-	55	41.954	ENSXCOG00000016307	-	88	41.237
ENSXCOG00000010422	-	58	39.080	ENSXCOG00000007994	-	97	44.444
ENSXCOG00000010422	-	56	35.772	ENSXCOG00000007413	-	59	35.772
ENSXCOG00000010422	-	66	41.284	ENSXCOG00000007414	-	91	41.284
ENSXCOG00000010422	-	82	34.118	ENSXCOG00000013787	-	71	34.118
ENSXCOG00000010422	-	59	33.136	ENSXCOG00000012458	-	70	34.320
ENSXCOG00000010422	-	58	46.341	ENSXCOG00000010567	-	93	43.119
ENSXCOG00000010422	-	58	38.686	ENSXCOG00000003537	-	89	38.686
ENSXCOG00000010422	-	62	40.741	ENSXCOG00000013870	-	72	40.741
ENSXCOG00000010422	-	55	35.025	ENSXCOG00000001292	-	82	47.273
ENSXCOG00000010422	-	62	37.870	ENSXCOG00000017328	-	75	42.202
ENSXCOG00000010422	-	60	37.870	ENSXCOG00000016860	-	97	54.688
ENSXCOG00000010422	-	59	34.359	ENSXCOG00000010576	-	75	37.017
ENSXCOG00000010422	-	55	37.278	ENSXCOG00000003472	-	89	37.956
ENSXCOG00000010422	-	57	39.216	ENSXCOG00000006614	-	92	46.364
ENSXCOG00000010422	-	58	40.141	ENSXCOG00000016567	-	76	45.192
ENSXCOG00000010422	-	60	44.037	ENSXCOG00000014363	-	56	44.037
ENSXCOG00000010422	-	96	34.104	ENSXCOG00000003371	zbtb24	64	34.104
ENSXCOG00000010422	-	60	36.095	ENSXCOG00000009597	ZNF319	83	44.048
ENSXCOG00000010422	-	59	37.870	ENSXCOG00000007368	-	93	37.870
ENSXCOG00000010422	-	61	46.032	ENSXCOG00000007937	-	93	46.032
ENSXCOG00000010422	-	59	41.606	ENSXCOG00000012921	-	93	44.444
ENSXCOG00000010422	-	51	47.273	ENSXCOG00000008083	-	94	47.273
ENSXCOG00000010422	-	54	32.338	ENSXCOG00000019492	-	91	39.200
ENSXCOG00000010422	-	59	36.301	ENSXCOG00000001226	-	79	43.678
ENSXCOG00000010422	-	59	47.826	ENSXCOG00000007981	-	82	46.789
ENSXCOG00000010422	-	60	36.429	ENSXCOG00000009668	-	67	36.429
ENSXCOG00000010422	-	57	44.068	ENSXCOG00000003468	-	80	41.538
ENSXCOG00000010422	-	58	44.167	ENSXCOG00000019382	-	77	44.167
ENSXCOG00000010422	-	62	45.455	ENSXCOG00000000528	-	82	49.412
ENSXCOG00000010422	-	59	36.095	ENSXCOG00000003431	-	78	39.416
ENSXCOG00000010422	-	59	37.500	ENSXCOG00000007957	-	84	43.023
ENSXCOG00000010422	-	59	37.278	ENSXCOG00000007139	-	67	37.870
ENSXCOG00000010422	-	59	45.045	ENSXCOG00000007376	-	98	39.344
ENSXCOG00000010422	-	60	33.742	ENSXCOG00000009785	-	81	33.742
ENSXCOG00000010422	-	76	35.616	ENSXCOG00000019675	scrt1b	91	35.616
ENSXCOG00000010422	-	58	45.946	ENSXCOG00000011725	-	96	45.536
ENSXCOG00000010422	-	63	40.132	ENSXCOG00000001116	-	89	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010422	-	90	62.712	ENSCANG00000038636	ZBTB40	50	62.712	Colobus_angolensis_palliatus
ENSXCOG00000010422	-	78	62.393	ENSMUSG00000060862	Zbtb40	98	32.386	Mus_musculus
ENSXCOG00000010422	-	94	58.824	ENSNBRG00000021247	-	99	50.886	Neolamprologus_brichardi