EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSXCOG00000010506 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 3424 bases
Position: chrKQ557208.1:13767437-13770860
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000013875	RRM_1	PF00076.22	4.2e-08	1	1
ENSXCOP00000013876	RRM_1	PF00076.22	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000014045	-	357	-	ENSXCOP00000013875	118 (aa)	-	-
ENSXCOT00000014046	-	381	-	ENSXCOP00000013876	126 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSXCOG00000010506	-	87	72.115	ENSXCOG00000015682	-	82	72.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010506	-	86	60.784	ENSCVAG00000011435	-	89	60.784	Cyprinodon_variegatus
ENSXCOG00000010506	-	85	88.000	ENSGAFG00000006970	-	94	85.437	Gambusia_affinis
ENSXCOG00000010506	-	72	72.941	ENSGAFG00000006965	-	82	72.941	Gambusia_affinis
ENSXCOG00000010506	-	92	66.964	ENSPFOG00000022708	-	82	66.964	Poecilia_formosa
ENSXCOG00000010506	-	95	82.143	ENSPFOG00000021959	-	85	82.143	Poecilia_formosa
ENSXCOG00000010506	-	86	72.549	ENSPLAG00000023759	-	80	72.549	Poecilia_latipinna
ENSXCOG00000010506	-	100	84.746	ENSPLAG00000013538	-	100	84.746	Poecilia_latipinna
ENSXCOG00000010506	-	96	84.071	ENSPMEG00000014948	-	91	82.031	Poecilia_mexicana
ENSXCOG00000010506	-	96	69.298	ENSPMEG00000014957	-	73	69.298	Poecilia_mexicana
ENSXCOG00000010506	-	96	69.298	ENSPREG00000002388	-	73	69.298	Poecilia_reticulata
ENSXCOG00000010506	-	89	85.714	ENSPREG00000002361	-	100	85.714	Poecilia_reticulata
ENSXCOG00000010506	-	87	72.115	ENSXMAG00000022673	-	76	72.115	Xiphophorus_maculatus
ENSXCOG00000010506	-	100	100.000	ENSXMAG00000027824	-	100	100.000	Xiphophorus_maculatus
ENSXCOG00000010506	-	96	68.421	ENSXMAG00000022455	-	73	68.421	Xiphophorus_maculatus
ENSXCOG00000010506	-	87	73.077	ENSXMAG00000026326	-	76	73.077	Xiphophorus_maculatus
ENSXCOG00000010506	-	86	69.307	ENSXMAG00000027771	-	99	69.307	Xiphophorus_maculatus