EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSXCOG00000010639 (Gene tree)
Gene ID: -
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Xiphophorus_couchianus
Status: putative
Strand: Minus strand
Length: 2066 bases
Position: chrKQ557210.1:30368040-30370105
Accession: ZDB-GENE-040426-1116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSXCOP00000014054	SBDS	PF01172.18	5.2e-34	1	1
ENSXCOP00000014054	SBDS_C	PF09377.10	1.7e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSXCOT00000014229	-	678	-	ENSXCOP00000014054	225 (aa)	-	-

Gene Model

Click here to download ENSXCOG00000010639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSXCOG00000010639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSXCOG00000010639	sbds	100	73.494	ENSG00000126524	SBDS	97	87.952	Homo_sapiens
ENSXCOG00000010639	sbds	100	82.731	ENSAPOG00000014285	sbds	100	82.731	Acanthochromis_polyacanthus
ENSXCOG00000010639	sbds	100	73.494	ENSAMEG00000018167	SBDS	99	73.494	Ailuropoda_melanoleuca
ENSXCOG00000010639	sbds	100	82.937	ENSACIG00000007308	sbds	100	82.937	Amphilophus_citrinellus
ENSXCOG00000010639	sbds	100	83.133	ENSAOCG00000016770	sbds	100	83.133	Amphiprion_ocellaris
ENSXCOG00000010639	sbds	100	83.534	ENSAPEG00000015897	sbds	100	83.534	Amphiprion_percula
ENSXCOG00000010639	sbds	100	81.928	ENSATEG00000006901	sbds	100	81.928	Anabas_testudineus
ENSXCOG00000010639	sbds	81	70.388	ENSANAG00000037501	-	99	70.388	Aotus_nancymaae
ENSXCOG00000010639	sbds	96	73.272	ENSANAG00000024342	-	95	78.313	Aotus_nancymaae
ENSXCOG00000010639	sbds	100	83.133	ENSACLG00000018750	sbds	100	83.133	Astatotilapia_calliptera
ENSXCOG00000010639	sbds	100	77.912	ENSAMXG00000005361	sbds	99	77.912	Astyanax_mexicanus
ENSXCOG00000010639	sbds	100	74.297	ENSBTAG00000004051	SBDS	99	74.297	Bos_taurus
ENSXCOG00000010639	sbds	98	52.439	WBGene00021063	sbds-1	97	52.439	Caenorhabditis_elegans
ENSXCOG00000010639	sbds	100	73.896	ENSCJAG00000041007	SBDS	99	73.896	Callithrix_jacchus
ENSXCOG00000010639	sbds	100	71.713	ENSCAFG00000010797	SBDS	99	71.713	Canis_familiaris
ENSXCOG00000010639	sbds	100	73.494	ENSCAFG00020005357	SBDS	99	73.494	Canis_lupus_dingo
ENSXCOG00000010639	sbds	100	73.896	ENSCHIG00000026854	SBDS	99	73.896	Capra_hircus
ENSXCOG00000010639	sbds	100	73.494	ENSTSYG00000033822	SBDS	99	73.494	Carlito_syrichta
ENSXCOG00000010639	sbds	62	66.871	ENSCAPG00000006634	SBDS	99	66.871	Cavia_aperea
ENSXCOG00000010639	sbds	100	74.297	ENSCPOG00000036143	SBDS	99	74.297	Cavia_porcellus
ENSXCOG00000010639	sbds	100	73.494	ENSCCAG00000020671	SBDS	93	87.952	Cebus_capucinus
ENSXCOG00000010639	sbds	100	73.494	ENSCATG00000039026	SBDS	99	73.494	Cercocebus_atys
ENSXCOG00000010639	sbds	100	74.699	ENSCLAG00000005721	-	99	74.699	Chinchilla_lanigera
ENSXCOG00000010639	sbds	99	52.016	ENSCLAG00000002113	-	99	52.016	Chinchilla_lanigera
ENSXCOG00000010639	sbds	100	73.494	ENSCSAG00000018275	SBDS	99	73.494	Chlorocebus_sabaeus
ENSXCOG00000010639	sbds	100	68.675	ENSCHOG00000003795	SBDS	99	68.675	Choloepus_hoffmanni
ENSXCOG00000010639	sbds	100	75.100	ENSCPBG00000014893	SBDS	99	75.100	Chrysemys_picta_bellii
ENSXCOG00000010639	sbds	99	62.903	ENSCSAVG00000011811	-	99	62.903	Ciona_savignyi
ENSXCOG00000010639	sbds	100	73.092	ENSCANG00000032368	SBDS	99	73.092	Colobus_angolensis_palliatus
ENSXCOG00000010639	sbds	62	66.871	ENSCGRG00001019886	Sbds	99	66.871	Cricetulus_griseus_chok1gshd
ENSXCOG00000010639	sbds	76	77.059	ENSCGRG00000009211	Sbds	94	77.059	Cricetulus_griseus_crigri
ENSXCOG00000010639	sbds	100	81.124	ENSCSEG00000005798	sbds	100	81.124	Cynoglossus_semilaevis
ENSXCOG00000010639	sbds	100	83.133	ENSCVAG00000001053	sbds	100	83.133	Cyprinodon_variegatus
ENSXCOG00000010639	sbds	100	77.108	ENSDARG00000027803	sbds	99	77.108	Danio_rerio
ENSXCOG00000010639	sbds	100	73.896	ENSDNOG00000041174	SBDS	99	73.896	Dasypus_novemcinctus
ENSXCOG00000010639	sbds	100	75.904	ENSDORG00000026218	Sbds	99	75.904	Dipodomys_ordii
ENSXCOG00000010639	sbds	88	63.000	FBgn0035714	CG8549	98	55.870	Drosophila_melanogaster
ENSXCOG00000010639	sbds	92	55.603	ENSEBUG00000015780	sbds	99	55.603	Eptatretus_burgeri
ENSXCOG00000010639	sbds	100	73.494	ENSEASG00005008821	SBDS	99	73.494	Equus_asinus_asinus
ENSXCOG00000010639	sbds	100	73.494	ENSECAG00000008202	SBDS	99	73.494	Equus_caballus
ENSXCOG00000010639	sbds	89	63.184	ENSEEUG00000004768	SBDS	97	63.184	Erinaceus_europaeus
ENSXCOG00000010639	sbds	100	78.715	ENSELUG00000008382	sbds	99	78.715	Esox_lucius
ENSXCOG00000010639	sbds	100	73.494	ENSFCAG00000022142	SBDS	99	73.494	Felis_catus
ENSXCOG00000010639	sbds	100	76.707	ENSFALG00000013808	SBDS	99	76.707	Ficedula_albicollis
ENSXCOG00000010639	sbds	100	74.297	ENSFDAG00000018947	-	99	74.297	Fukomys_damarensis
ENSXCOG00000010639	sbds	100	80.723	ENSFHEG00000000708	sbds	100	81.526	Fundulus_heteroclitus
ENSXCOG00000010639	sbds	100	76.707	ENSGMOG00000018356	sbds	99	76.707	Gadus_morhua
ENSXCOG00000010639	sbds	100	75.502	ENSGALG00000027989	SBDS	99	75.502	Gallus_gallus
ENSXCOG00000010639	sbds	92	83.043	ENSGAFG00000014204	sbds	100	83.043	Gambusia_affinis
ENSXCOG00000010639	sbds	100	77.912	ENSGACG00000012697	sbds	100	77.912	Gasterosteus_aculeatus
ENSXCOG00000010639	sbds	84	73.709	ENSGAGG00000022402	SBDS	99	73.709	Gopherus_agassizii
ENSXCOG00000010639	sbds	96	56.250	ENSGGOG00000040023	-	92	56.250	Gorilla_gorilla
ENSXCOG00000010639	sbds	100	83.133	ENSHBUG00000002660	sbds	100	83.133	Haplochromis_burtoni
ENSXCOG00000010639	sbds	100	72.691	ENSHGLG00000009671	SBDS	99	72.691	Heterocephalus_glaber_female
ENSXCOG00000010639	sbds	100	72.691	ENSHGLG00100011332	SBDS	99	72.691	Heterocephalus_glaber_male
ENSXCOG00000010639	sbds	100	79.920	ENSHCOG00000018606	sbds	100	79.920	Hippocampus_comes
ENSXCOG00000010639	sbds	100	76.707	ENSIPUG00000006536	sbds	99	76.707	Ictalurus_punctatus
ENSXCOG00000010639	sbds	100	50.794	ENSJJAG00000003934	-	99	51.200	Jaculus_jaculus
ENSXCOG00000010639	sbds	100	71.486	ENSJJAG00000012033	-	99	71.486	Jaculus_jaculus
ENSXCOG00000010639	sbds	100	84.337	ENSKMAG00000018542	sbds	100	84.337	Kryptolebias_marmoratus
ENSXCOG00000010639	sbds	100	79.518	ENSLBEG00000016687	sbds	100	79.518	Labrus_bergylta
ENSXCOG00000010639	sbds	100	64.032	ENSLACG00000018916	SBDS	99	64.032	Latimeria_chalumnae
ENSXCOG00000010639	sbds	100	77.108	ENSLOCG00000004073	sbds	99	77.108	Lepisosteus_oculatus
ENSXCOG00000010639	sbds	100	73.494	ENSLAFG00000008763	SBDS	99	73.494	Loxodonta_africana
ENSXCOG00000010639	sbds	100	73.494	ENSMFAG00000032620	SBDS	99	73.494	Macaca_fascicularis
ENSXCOG00000010639	sbds	100	73.494	ENSMMUG00000045653	SBDS	99	73.494	Macaca_mulatta
ENSXCOG00000010639	sbds	100	73.494	ENSMNEG00000031523	SBDS	99	73.494	Macaca_nemestrina
ENSXCOG00000010639	sbds	100	66.812	ENSMLEG00000036826	SBDS	99	66.812	Mandrillus_leucophaeus
ENSXCOG00000010639	sbds	100	82.329	ENSMAMG00000016062	sbds	100	82.329	Mastacembelus_armatus
ENSXCOG00000010639	sbds	100	83.133	ENSMZEG00005024385	sbds	100	83.133	Maylandia_zebra
ENSXCOG00000010639	sbds	100	75.502	ENSMGAG00000002119	SBDS	99	75.502	Meleagris_gallopavo
ENSXCOG00000010639	sbds	100	65.639	ENSMAUG00000022214	-	100	65.639	Mesocricetus_auratus
ENSXCOG00000010639	sbds	100	73.896	ENSMICG00000014366	SBDS	88	88.095	Microcebus_murinus
ENSXCOG00000010639	sbds	100	74.297	ENSMOCG00000011739	Sbds	99	74.297	Microtus_ochrogaster
ENSXCOG00000010639	sbds	100	77.200	ENSMMOG00000005061	sbds	100	77.600	Mola_mola
ENSXCOG00000010639	sbds	100	74.297	ENSMODG00000006644	SBDS	99	74.297	Monodelphis_domestica
ENSXCOG00000010639	sbds	100	79.116	ENSMALG00000010219	sbds	100	79.116	Monopterus_albus
ENSXCOG00000010639	sbds	100	75.100	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSXCOG00000010639	sbds	100	75.502	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSXCOG00000010639	sbds	100	75.100	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSXCOG00000010639	sbds	100	75.502	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSXCOG00000010639	sbds	64	69.461	ENSMPUG00000016192	SBDS	96	69.461	Mustela_putorius_furo
ENSXCOG00000010639	sbds	70	66.851	ENSMLUG00000013575	SBDS	99	66.851	Myotis_lucifugus
ENSXCOG00000010639	sbds	100	75.100	ENSNGAG00000012093	Sbds	99	75.100	Nannospalax_galili
ENSXCOG00000010639	sbds	100	83.133	ENSNBRG00000017027	sbds	100	83.133	Neolamprologus_brichardi
ENSXCOG00000010639	sbds	100	73.494	ENSNLEG00000013288	SBDS	91	86.364	Nomascus_leucogenys
ENSXCOG00000010639	sbds	100	74.699	ENSOPRG00000008721	SBDS	99	74.699	Ochotona_princeps
ENSXCOG00000010639	sbds	100	56.452	ENSODEG00000000137	-	84	58.635	Octodon_degus
ENSXCOG00000010639	sbds	100	59.036	ENSODEG00000001116	-	99	59.036	Octodon_degus
ENSXCOG00000010639	sbds	100	67.871	ENSODEG00000019253	-	84	67.871	Octodon_degus
ENSXCOG00000010639	sbds	100	83.534	ENSONIG00000005874	sbds	100	83.534	Oreochromis_niloticus
ENSXCOG00000010639	sbds	81	69.903	ENSOANG00000007674	-	99	70.588	Ornithorhynchus_anatinus
ENSXCOG00000010639	sbds	100	75.100	ENSOCUG00000003170	SBDS	99	75.100	Oryctolagus_cuniculus
ENSXCOG00000010639	sbds	100	79.920	ENSORLG00000023489	sbds	100	79.920	Oryzias_latipes
ENSXCOG00000010639	sbds	100	79.518	ENSORLG00020019282	sbds	100	79.518	Oryzias_latipes_hni
ENSXCOG00000010639	sbds	100	79.518	ENSORLG00015008005	sbds	100	79.518	Oryzias_latipes_hsok
ENSXCOG00000010639	sbds	100	81.124	ENSOMEG00000022747	sbds	100	81.124	Oryzias_melastigma
ENSXCOG00000010639	sbds	100	62.651	ENSOGAG00000015036	-	99	62.651	Otolemur_garnettii
ENSXCOG00000010639	sbds	100	74.297	ENSOGAG00000009011	-	99	74.297	Otolemur_garnettii
ENSXCOG00000010639	sbds	100	73.896	ENSOARG00000010609	SBDS	99	73.896	Ovis_aries
ENSXCOG00000010639	sbds	100	73.896	ENSPPAG00000043889	-	99	73.896	Pan_paniscus
ENSXCOG00000010639	sbds	100	73.494	ENSPPRG00000002307	SBDS	99	73.494	Panthera_pardus
ENSXCOG00000010639	sbds	100	73.494	ENSPTIG00000021308	SBDS	99	73.494	Panthera_tigris_altaica
ENSXCOG00000010639	sbds	100	61.044	ENSPTRG00000047744	-	99	61.044	Pan_troglodytes
ENSXCOG00000010639	sbds	100	73.494	ENSPTRG00000019254	SBDS	99	73.494	Pan_troglodytes
ENSXCOG00000010639	sbds	100	61.044	ENSPTRG00000050835	-	99	61.044	Pan_troglodytes
ENSXCOG00000010639	sbds	96	78.704	ENSPTRG00000048174	-	94	78.704	Pan_troglodytes
ENSXCOG00000010639	sbds	100	73.494	ENSPANG00000004078	SBDS	99	73.494	Papio_anubis
ENSXCOG00000010639	sbds	100	78.715	ENSPKIG00000006489	sbds	99	78.715	Paramormyrops_kingsleyae
ENSXCOG00000010639	sbds	81	71.498	ENSPSIG00000014603	SBDS	99	71.498	Pelodiscus_sinensis
ENSXCOG00000010639	sbds	100	82.731	ENSPMGG00000004246	sbds	100	82.731	Periophthalmus_magnuspinnatus
ENSXCOG00000010639	sbds	100	75.100	ENSPEMG00000008728	Sbds	99	75.100	Peromyscus_maniculatus_bairdii
ENSXCOG00000010639	sbds	100	75.502	ENSPCIG00000029718	SBDS	99	75.502	Phascolarctos_cinereus
ENSXCOG00000010639	sbds	100	85.944	ENSPFOG00000015837	sbds	100	85.944	Poecilia_formosa
ENSXCOG00000010639	sbds	100	86.345	ENSPLAG00000003641	sbds	100	86.345	Poecilia_latipinna
ENSXCOG00000010639	sbds	100	85.944	ENSPMEG00000019483	sbds	100	85.944	Poecilia_mexicana
ENSXCOG00000010639	sbds	100	85.944	ENSPREG00000018758	sbds	100	85.944	Poecilia_reticulata
ENSXCOG00000010639	sbds	100	73.494	ENSPPYG00000017513	SBDS	99	73.494	Pongo_abelii
ENSXCOG00000010639	sbds	100	73.896	ENSPCOG00000021098	SBDS	88	88.095	Propithecus_coquereli
ENSXCOG00000010639	sbds	100	73.896	ENSPVAG00000009369	SBDS	99	73.896	Pteropus_vampyrus
ENSXCOG00000010639	sbds	100	83.133	ENSPNYG00000022403	sbds	100	83.133	Pundamilia_nyererei
ENSXCOG00000010639	sbds	100	79.518	ENSPNAG00000001120	sbds	99	79.518	Pygocentrus_nattereri
ENSXCOG00000010639	sbds	100	75.100	ENSRNOG00000000888	Sbds	99	75.100	Rattus_norvegicus
ENSXCOG00000010639	sbds	100	73.494	ENSRBIG00000035557	SBDS	99	73.494	Rhinopithecus_bieti
ENSXCOG00000010639	sbds	100	73.494	ENSRROG00000040842	-	99	73.494	Rhinopithecus_roxellana
ENSXCOG00000010639	sbds	100	62.705	ENSRROG00000041986	-	99	62.705	Rhinopithecus_roxellana
ENSXCOG00000010639	sbds	86	46.465	YLR022C	-	79	46.465	Saccharomyces_cerevisiae
ENSXCOG00000010639	sbds	92	70.996	ENSSBOG00000022460	SBDS	99	70.996	Saimiri_boliviensis_boliviensis
ENSXCOG00000010639	sbds	100	63.052	ENSSHAG00000010263	SBDS	99	63.052	Sarcophilus_harrisii
ENSXCOG00000010639	sbds	100	79.116	ENSSFOG00015001108	sbds	99	79.116	Scleropages_formosus
ENSXCOG00000010639	sbds	100	81.124	ENSSMAG00000020506	sbds	100	81.124	Scophthalmus_maximus
ENSXCOG00000010639	sbds	100	82.329	ENSSDUG00000001528	sbds	100	82.329	Seriola_dumerili
ENSXCOG00000010639	sbds	100	82.329	ENSSLDG00000003659	sbds	100	82.329	Seriola_lalandi_dorsalis
ENSXCOG00000010639	sbds	68	87.582	ENSSARG00000013132	-	100	87.582	Sorex_araneus
ENSXCOG00000010639	sbds	70	89.535	ENSSARG00000001899	-	73	89.535	Sorex_araneus
ENSXCOG00000010639	sbds	100	72.691	ENSSPUG00000002699	SBDS	99	72.691	Sphenodon_punctatus
ENSXCOG00000010639	sbds	100	83.936	ENSSPAG00000016419	sbds	100	76.000	Stegastes_partitus
ENSXCOG00000010639	sbds	100	73.896	ENSSSCG00000007732	SBDS	99	73.896	Sus_scrofa
ENSXCOG00000010639	sbds	62	71.341	ENSTGUG00000003426	SBDS	99	71.341	Taeniopygia_guttata
ENSXCOG00000010639	sbds	100	83.133	ENSTRUG00000021443	sbds	100	83.133	Takifugu_rubripes
ENSXCOG00000010639	sbds	100	81.928	ENSTNIG00000019000	sbds	100	81.928	Tetraodon_nigroviridis
ENSXCOG00000010639	sbds	90	70.443	ENSTBEG00000001178	SBDS	97	70.443	Tupaia_belangeri
ENSXCOG00000010639	sbds	100	57.028	ENSTTRG00000003921	SBDS	99	57.028	Tursiops_truncatus
ENSXCOG00000010639	sbds	100	73.494	ENSUAMG00000001326	SBDS	99	73.494	Ursus_americanus
ENSXCOG00000010639	sbds	100	73.494	ENSUMAG00000015353	SBDS	99	73.494	Ursus_maritimus
ENSXCOG00000010639	sbds	100	73.494	ENSVVUG00000016478	SBDS	99	73.494	Vulpes_vulpes
ENSXCOG00000010639	sbds	100	74.297	ENSXETG00000010093	sbds	99	74.297	Xenopus_tropicalis
ENSXCOG00000010639	sbds	100	99.111	ENSXMAG00000006065	sbds	100	99.111	Xiphophorus_maculatus